Etheostoma spectabile (orangethroat darter): 116697879
Help
Entry
116697879 CDS
T08457
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
esp03037
]
116697879 (pkd2)
04040 Ion channels [BR:
esp04040
]
116697879 (pkd2)
Cilium and associated proteins [BR:
esp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116697879 (pkd2)
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116697879 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
EspA
Motif
Other DBs
NCBI-GeneID:
116697879
NCBI-ProteinID:
XP_032385322
LinkDB
All DBs
Position
2:complement(10158583..10174862)
Genome browser
AA seq
906 aa
AA seq
DB search
MSSSRVRPQQLKLPQSQTGRLPHRLDSSEGIEMENIQHQDLGLGGVIGTPSPPSRQAWSR
DNPGFEPEDEIMQADWPPASPGRRSVSTASSSSCSSGLGSYAGAGSSTHIPRGGLYPTPT
VDARQQDRHDHRSCMKQILQKIRILWGTELMEDSDNSRERYLRNVLREMVTYVVFLITIC
ILTYGMVSANMYYYTKVMSQLFLDTPLSAGDPSSFRSLSTMEDFWKFTEGPFLNGMYWEV
WYNNKSLPENQSLIYYENLLLGVPRLRQVKVRNESCSIHEDLRDEVHDCYNMYTPTNEDT
TSFGPKKGTAWVYTAESNMNGSGYWGQISKYGGGGYYQDLSRTKEESATQLQFLKDHLWL
DRGTRAVFLDFSVYNGNINLFCIARLLVEFPATGGVVTSWQFQTVRLIRYVSSWDYFVGL
CEVAFCLFILYYVVEEVLEIRIHRLHYFKSLWNCLDVLIVVLSVVAIIMNITRTAMVGNH
LKGLLENHTAHPSFEHLANLQVQFNNVAAVIVFFSWVKLFKFINFNKTMSQLSGTMSRCA
KDLVGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILGDFEFSEIEEANP
VLGPIYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRTEMEMSDLIKKGCNKALLK
LRLKKTAVDDISDSLRQAGGKLNIDELRQDLKGKGHTDAEIQAIFAKYDRDGDQELTEHE
HQQMRDDLEKEREDLDLERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGV
SYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLETMERAKLKRRDVLGRLLDGVIEDERL
GRDTDVHREQMERLVREELERWESDDVRPFLQKKIRYHFLTHFKGGDQIKLHLKYLNALK
VMEVLL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcccgagtcagaccgcagcagctaaagttaccgcagagccagactggcagg
ttgccgcacagactagactcaagcgaagggatagagatggagaacatccagcatcaagac
ctcggtctcgggggagtaataggcaccccgtccccgccgtcaagacaagcgtggagtcgg
gataacccgggttttgagcccgaggacgagattatgcaagccgactggcctccggcgagt
cccgggaggaggtcggtgtccacggcctctagcagcagctgcagcagcggcctaggcagc
tacgccggcgcgggcagcagcacccacatcccccgcggaggactctacccgaccccgaca
gtggacgcccggcagcaggacaggcatgaccaccgcagctgtatgaagcagatactccaa
aaaatcagaattctgtggggcacagagctgatggaggacagtgacaacagtcgagagagg
tacctcaggaacgtcctgagggagatggttacatatgttgtattcctcatcactatttgt
atcttgacttatgggatggtgagtgccaatatgtactactataccaaagtcatgtctcag
cttttcctggacacaccgctgtctgccggggatccttcctcttttagaagcctctcaacc
atggaggatttctggaagttcacagagggacctttcctcaatggcatgtactgggaggtg
tggtacaacaacaagagcctgccagagaatcagagtcttatctactatgagaacctcctc
ctcggggtgccacggctccggcaggtcaaagtccgcaacgagtcctgttccatccacgaa
gatctgagagatgaagttcacgactgctacaacatgtacaccccaaccaacgaagacaca
acctcctttggccccaagaaaggaaccgcgtgggtgtatacagcagagagtaacatgaat
gggagcggttattggggccagatatctaaatatggaggtggaggatactaccaagacctg
tctcgtacaaaagaggagtcagcaacccaactgcagtttctgaaagaccacctgtggctg
gacagaggcaccagagcggtgtttctcgacttctctgtctacaatgggaacatcaacctt
ttctgcattgccaggttgttggtggagttccctgctactggtggggtggtgacgtcctgg
cagttccaaacagtgcgtctgatacgatatgtgtccagctgggactactttgtgggtctg
tgtgaggtggcattctgtctattcatcctctactacgtggtggaggaagtgctggagatc
cgcatccaccgcttgcattacttcaagagcttgtggaactgtctggatgttctcattgtt
gtgttgagtgttgttgccatcatcatgaacataacccgaacagccatggttggcaaccat
ctgaaaggcctgttggagaaccacactgctcaccccagctttgagcatttggccaacctg
caggtccagttcaacaacgtggccgcggtcatcgtctttttttcctgggtcaagcttttt
aagttcatcaacttcaataagaccatgagtcagctgtctggcaccatgtctcgctgtgcc
aaagaccttgttggttttgccatcatgttcttcatcatcttcctggcgtatgctcagcta
gcctatctggtgtttggaacccaagtcaacgatttcagcaccttccaagccagcatattt
actcagttccgtatcattctgggagactttgagttctcagaaatagaggaggcaaatcca
gttctcggacctatctactttacaacctttgtattcttcattttctttattctcatgaac
atgttcctggccatcatcaatgacacttactctgaggtgaaggccgacatgtcccagcag
aggactgagatggaaatgtctgatctcattaaaaagggttgtaacaaagctttgctgaag
ttgagactgaagaagacggcagtagacgacatctcggacagtttgcgccaggccgggggc
aaactaaacattgatgaactccgccaggaccttaaaggaaagggccacacagacgcagag
attcaggccatctttgccaagtatgatcgcgacggcgaccaggagctgacggagcatgaa
caccagcagatgagagacgacctggagaaagagagagaggacttggatctggaacgcaat
tcgctgactagacccagcagcgggcggagcttccctcgtacccaggacgactcggaggaa
gacgatgacgaggatagcggccacagctctcggcgccgtggcagcagctcagggggtgtc
tcctatgaagagtttcaagtgctggtgagacgtgtggacaggatggagcactccatcggc
agcatagtgtccaagatagatgctgtgatcgtgaagctggaaactatggagagagctaaa
ctcaaaaggagagatgtgctcggcagattgctggatggagtcatagaggatgagcgtctg
ggacgggacacagacgtccacagggagcagatggagaggctggtaagggaggaactggag
cgatgggagtctgatgatgtgcgaccatttttgcaaaagaaaataagataccatttcttg
acacattttaaaggaggtgatcaaatcaaacttcacctcaagtatttaaatgcactgaaa
gtgatggaggttctcctctga
DBGET
integrated database retrieval system
