Etheostoma spectabile (orangethroat darter): 116697981
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Entry
116697981 CDS
T08457
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04514
Cell adhesion molecule (CAM) interaction
esp04517
IgSF CAM signaling
esp04518
Integrin signaling
esp04672
Intestinal immune network for IgA production
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116697981 (itga4)
04514 Cell adhesion molecule (CAM) interaction
116697981 (itga4)
04517 IgSF CAM signaling
116697981 (itga4)
04518 Integrin signaling
116697981 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116697981 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116697981 (itga4)
04810 Regulation of actin cytoskeleton
116697981 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116697981 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116697981 (itga4)
04515 Cell adhesion molecules [BR:
esp04515
]
116697981 (itga4)
04090 CD molecules [BR:
esp04090
]
116697981 (itga4)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116697981 (itga4)
Exosomal proteins of other cancer cells
116697981 (itga4)
Cell adhesion molecules [BR:
esp04515
]
Integrins
Integrin alpha subunits
116697981 (itga4)
CD molecules [BR:
esp04090
]
Proteins
116697981 (itga4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
CLIPPER
SCY_4732_
Phage_Bf23_A1
Motif
Other DBs
NCBI-GeneID:
116697981
NCBI-ProteinID:
XP_032385543
LinkDB
All DBs
Position
11:complement(2461708..2494127)
Genome browser
AA seq
1036 aa
AA seq
DB search
MRPSAGSGSACYSLVLVLVLVLVQVMVLVHPAAGYSLDQDHTLEFRGPPSSMFGYSVLLH
RHGAHSWLVVGAPVANSSFSPLVSSPGAIYRCSITAESRHCHPMRADVQNCGKTCDAESD
HQWLGVSLSRQPGDNGGHILACAHRWKNVHYANKDGQNHKLPNGVCYRYANDLRHAQPII
PCYKDHQRKFGEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVFNASSGGMSVYLDD
DAGAVGFGSYLGYAVGAGHFLSPGTVEVLGGAPQYNQKGKVFIFVVDNNMLRVVSEVSGK
ELGSYFGSSVCAVDLNADGLSDLLVGAPMATGSIREEGRVHVYINQGQAKLLEAGFQLTG
SDAYASRFGETIANLGDLDDDGYPDVAVGAPQEDDLKGAVYIYNGREEGISPTPSQRITG
STLGRDLRMFGQSLSSGIDIDDNGYQDVAVGAFLSDMAVVLRTRPVIQVKASLALPPQID
QLETLCREHKTPTVCLNVTVCFSVRSRQFRGAIELQYNLTSDLLHKPSFPHRFYFHGNGS
SNSTSGRVRARLGQVTCATHVAYQRKDVRDIFTPVKFEVSYSHRETNTHKASFKTFPPLK
PILQQSKGHQNTVTNQTSFVRSCSLVNCSTNMQLSAQLVLPDQQQYFALGSGQAIMLKTS
ILNSGDDAFLPRLTLCFPNNIHYIKVLQNQNNVVSCDVTQEVNSTTAGVDCSVTSLLIAA
HSQLNINFLLDVNQNSTPGDIIIHVNTSSDNYEKEEYLHDNSISLLLPLKYGVNVNIHGF
VSPTSFVFGDEDNTPVDCYAERFNYTYKVLNSGPSRSLDTVVDISLPKILTPYRHRLLQV
VDWQSSQGTCSISDTTVSVIEDCDVPEASFIQNLIFFFSSTSTRRMFCGRSDELCEWLEC
RLGNLEAGRDAFIQLEIRLNPAVLLQAPGRLGVMKLESTAMMSNPRESPHTILTSKQPVA
QVVVEALFTQKPSTTVKLFIIVVSLVLGLMILAALIWCLWKAGFFKREFQKKEEEEEFKR
DSWDYVPKLDKRQSTA
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccctcagcgggcagtgggtctgcgtgctacagcctggtcctggtcctggtcctg
gttctggttcaggtcatggtcctggttcatcctgcagcaggatacagtctggatcaggat
cacactctggaattccgtggccccccctcttccatgtttggatactcagtcctgctgcat
cgccatggagctcacagctggttggtggttggagccccagtagcaaactcatccttcagt
ccattggttagctctccaggagctatttatcgctgcagcatcactgctgagtcccgacac
tgccatcccatgcgtgctgacgtgcagaactgtggaaagacgtgcgatgcagagagtgat
caccagtggctgggagtcagtctgtccagacaacctggagacaacggagggcacatcctg
gcatgcgctcaccgctggaagaacgtccactacgcaaataaagacggtcagaaccacaag
ctgcctaatggagtctgttatcgctacgccaacgacctgagacacgctcaacccatcata
ccatgctacaaagaccaccagaggaagttcggtgaggattatgggtcatgtcaggccggt
atttccaacttcctgacagaggatctgatcatcatgggggctccagggacgtcttattgg
acgggttcagttctggtctttaacgcgtccagtggagggatgtcagtgtatctggatgac
gatgctggagccgtcggcttcggaagctacctgggttacgctgtaggagccggtcacttt
ttgagtcctggtactgtggaggtcttgggtggagctccacagtacaaccagaagggcaag
gtcttcatctttgtagtagacaacaacatgctgcgggttgtctctgaagtgtctggaaaa
gagctgggatcttactttgggtcgagtgtgtgtgcggtggatctgaacgctgatggtttg
tcagatctgttggtgggtgctcccatggcaacaggcagcattagggaggagggaagagtc
catgtgtacatcaaccaggggcaggcaaagctgttggaggcggggtttcaactaactggc
agcgacgcctacgcttcccggtttggagagaccatcgccaacctgggagacctggacgac
gatggttaccctgatgtggcggttggtgccccacaggaagatgacctaaaaggagctgtc
tacatttacaacggcagagaggagggcatctcaccaactccatctcagaggattaccggg
tccaccctgggtcgtgacctcaggatgttcggccagtcgctgagctctggcattgacatt
gatgacaacggctaccaggatgtggcggttggtgcattcctctcggacatggccgtggtt
ctcaggacccgtccggtgattcaggtgaaggcgtctctggctctgcccccgcagattgac
cagctggagacactgtgccgagaacacaagactccaactgtctgcttaaatgttaccgtg
tgcttcagtgttaggtcaaggcagttcagaggagctatagagcttcaatataatttgacc
tctgacctcctccataaaccatccttccctcatcgtttctatttccatggtaacgggtcg
tccaatagcacgagtgggcgtgtgagagcacgacttggccaggtcacttgtgcaacacat
gtggcttaccaaaggaaagatgtgagggacatttttactccagtcaagtttgaagtttcc
tatagtcacagagaaacaaacacccacaaagcctctttcaaaacctttcctccattaaaa
cccattctgcagcagagcaaaggacaccagaacactgtcaccaaccagacttcgtttgtt
cgctcctgttcactggtgaattgttcaaccaacatgcagctgtcagctcaactagtgctg
ccagatcagcagcagtactttgctcttggctctggacaggccatcatgttaaaaacatcc
atactgaattctggagatgatgccttcctgccacgactaacgctgtgtttcccaaacaac
atccactacattaaagtactgcagaatcagaacaatgtggtcagttgtgatgtcacacag
gaggtcaacagcacaacggcaggcgttgactgcagcgtcaccagcctcctcatcgcagcc
cattcccagttgaatatcaactttctattggatgtcaaccagaacagcacacctggtgac
atcatcattcacgtcaacaccagcagtgataactatgagaaggaggagtatctccatgac
aactccatcagtctcctccttcctctcaaatatggagtcaacgtcaacatccacggtttt
gtgtctcccacctcatttgtgtttggagatgaagacaatactccagtagactgctacgcc
gaaagattcaactacacatacaaggtgttaaactcgggtcctagcaggtctctagatact
gtggtagacatcagcctaccaaagatcctcacaccttaccgacacagactgctgcaggtg
gtcgactggcagtcgtctcagggtacgtgttcgatcagtgacacaactgtttcagtgatc
gaggactgtgatgtccctgaagcttccttcatccaaaatctcatcttcttcttctcctcc
acctccacccgcagaatgttttgtggacgtagtgatgagctgtgtgagtggttggagtgt
cgtctcggtaacctggaggcggggagagatgccttcattcaactggagatcagactgaat
cctgctgtcctactgcaagctccgggtcgtcttggtgtcatgaagttggagagcacagca
atgatgtcaaatcccagagaaagtcctcataccatcctcacttccaaacaacctgtagct
caggtggtggtggaagctctttttacccagaaaccctcaacaacagtaaaactcttcatc
atcgttgtcagtttagttttaggtctgatgatcctggctgcgctcatctggtgtctgtgg
aaggctggcttctttaagagggagttccagaagaaggaggaggaggaggagttcaagaga
gatagctgggactatgttcctaaactcgacaaaagacagagcaccgcctaa
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