Etheostoma spectabile (orangethroat darter): 116697989
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Entry
116697989 CDS
T08457
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116697989
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116697989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
DH_Alsin
RCC1_2
VPS9
PH_alsin
MORN
Alsin_RLD
PH
DH_ALS2
HA_Alsin
SOS1_NGEF_PH
RhoGEF
PH_16
RHG20_PH
Tudor_2
Motif
Other DBs
NCBI-GeneID:
116697989
NCBI-ProteinID:
XP_032385557
LinkDB
All DBs
Position
11:complement(13940493..13972796)
Genome browser
AA seq
1655 aa
AA seq
DB search
MENREESPADEPAPTPPEQGLLHIWQSAGPSAQLCPERVLLSRPVLQATLGEHHGLLLTQ
GGQVYSFGELLWRDLSIPVSAPVLEVSLLGKTVVRVAAGGFHCGALSEQGNVYMWGENTA
GQCGLTERGTITNITVPEPCQVTVVDSEVVPPAVVRVLDLALGREHSLALSAQKEVWAWG
SGCQLGLVTNNFPVWRPQKVEHLAGRHVIQVSCGAYHSLALVRSLPPQNSQNPTKSTEKR
ERGRSPHYAVTEREEPLAVDAGHYCPLGVELNEVMTGETSPRTRGPRRRLQSRGRSAGSS
PGSAAGSCPFSENGKSNTKQKNLSVGQTHPLTDTDGSPKSHLLSGWEANKNSAFPDELEL
QNLLQKLSSHSFEMRHTTGPGDTDSLSSYTSDDSCVSSTPSTDLLTSSYKDDSPIKSQNN
NGVAVPYSSSPVCLEEVRLCLEAEKQTLQGQKSSSLTNINQKGRAATNRRRSLPGIPTRG
SPRQLRSCACRPSSAGWSQVAAAEEAGDGLPSLETEVWSWGRGSEGQLGHGDQLARLQPL
CIKSLTGEEVIKVATGSHHSLALTAHCQVYSWGSNMCGQLGHVNSPVTVPQQAKLSDGLR
VWDVSAGQSHSLLLADGDCVQPVLLYCGQQQEPTSAPSPRSHQSQSSCQRSPNRAESYTV
RPTLLPFCMEMGYISTVCSGGQSCAVLADQNVMGFISAIHELASRERQFYCWSSTVMERL
LTPLRNREIVSPSLGEPCTHLFFSVCESFVRLSVLIGRHSTSLSYFLHDVQGCDVTSLPL
LTHAEHFMDIYKEYCSSVGDFHVMGGFRSLHKLSLECLGSQQTMLAQLCVSDQSVSGDVD
LGSLLYWPLQQLHQYSRVLLKLAACYDVLTTEYQSLHQGCGQYDSLSLSLLRKKKEAETT
FLFWKTHSGKTTEVLRLPQRRVVCESSNRSLTLQNAGRFSNHWFILFNDTLVHTQAAIPS
QSLFSTHHVYPLTCLWAKPLTEDSSGLYAIKITCPEESFTLVASTPQEKNKWLRSINQAV
DQVLSGASQGSSPGMTAMSRTASYTFTGEGRFKDAQYNGSWLAGRVNGRGTMKWPDGRIY
NGNFKKGQEDGYGECIIPNKVLKKPDTYQGHWRDGKIHGFGKYKYASGEVYEGCFCDGHR
HGYGMLSSGRLTKNSSSVFIGQWVHDKKTGYGVYDDITRGEKYMGLWLDEQRHGSAVVVT
QCGVYYEGTFRDNKMSGPGLLMSDDDTVLHGEFSDDWTVNGKGVLFQANGDCLQGLFSGE
WTTGLKVVGTYTKLAADEPENKERNSLLKLGQYMVPAGQRWLCVFDECWSRLGCDAPGRG
ERSVAWDNIAVTITTARRQSPDLSRSQRKVLECLECIPQHGEPVTTANYDNIRRYLIKAC
ETPHHPLGWLVETLVTAYRMTYVGVGSNRRLLNQAVQEVLAYLTHFYSIVRFLFSGLPDD
GGIIPEPPASPSRSRHSSKIAEQNSVVVVSCSSLLLPQLLPRLYPPLFTLYCLQEEQKEA
QYWERILRLNKQPDQSLLSFLGVQEKFWPVWMSILGEKKQIVSSSKDACFVFAVETLQQI
STTFTPSDKLLVIQKTFEELTQEVKPMLNSNFLWCMDDLLPLFLYVVLRARIRNLGAEIS
LIEDLMDPNVQHGEMGLMFTTLKACYIQIQHESAM
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagagaggagagccctgcagatgagccagctcccactcctccagagcaagga
ctgctccacatctggcagtcagcggggcccagtgcgcaactctgtccagagagagtgctc
ctgtccaggcctgtcctgcaggccaccttgggagaacaccatggactcctgctgacacag
ggtggacaggtctattctttcggagaacttttgtggagggatctgagcatcccggtgtct
gctccggtgctggaggtctctctgctggggaagacggtggtccgtgtggctgctggtggt
ttccactgcggtgcgctgagcgagcagggcaatgtctacatgtggggggagaacactgca
ggacagtgtggtctgaccgagaggggcacaatcacaaacatcacagttccagagccttgc
caagtcacagtggtggacagtgaggttgttcctccagcagtggttcgggtgttggatctg
gctctcggacgggagcacagcttggctttgtcggcccagaaagaggtgtgggcgtggggc
agcggctgccagcttggcttggtcaccaacaacttccctgtttggagaccacagaaggtg
gagcacttggcaggcagacatgtcattcaggtgtcttgtggtgcctaccacagcctggcc
ctggttcgcagtttacctccacagaatagccagaatccaaccaagtcaactgagaagagg
gagcggggtcggtcgcctcactacgcagtgacagaaagggaggagccgttagcagttgat
gctggtcactactgtccgctgggggtggagctgaatgaagtcatgacaggcgagacctct
cccagaacaagaggacccagacgaaggttacaatctcggggacggtcagctggaagcagc
cctggctctgcagccggttcatgtccattttctgaaaatggaaaatctaacactaaacag
aaaaatctttcagttgggcaaactcaccctctcactgacacagatggcagccccaagtct
catttgctgtcaggctgggaagccaataagaactctgctttccctgacgagctagagctt
cagaatctccttcagaaactctctagtcactcatttgagatgcgccacaccaccgggccg
ggagataccgactcactgagcagttacacttcagatgacagctgtgtttcctcaactcct
tccacggatctgttgacttccagttacaaagatgactcgccaatcaagagtcaaaacaac
aatggcgtggccgtgccgtactcctcctccccagtgtgtttggaagaagttcggctttgt
ctggaggcggagaagcagacactgcaggggcagaaaagctccagtctcacaaatataaac
cagaagggcagagcagcaacaaacaggagacgctccctgcctggaatacccacccgtggg
tctccacggcaactgcggtcttgtgcctgcaggccatcctctgctggttggtcccaggtt
gctgcggctgaggaggctggagatgggctgccgtctctggagacagaagtgtggagctgg
ggccgcgggtctgaggggcaactgggccacggagatcagcttgctagactccagcctctg
tgtatcaagtctttgacaggggaggaggtgatcaaagtcgccacagggtcacaccattcc
ctggctctcactgctcactgccaggtgtactcatggggcagcaacatgtgtggacagctc
ggtcacgtcaacagtcctgtcactgtacctcaacaggcaaagctgtctgatggtcttcgg
gtttgggacgtgtcagccggtcagagccactccctcctcctggctgatggagactgtgtc
cagccggtcctgttgtactgtggccaacagcaggagccaacgtcagcgccgagtccaagg
tcccaccagagtcaaagttcatgtcagaggtcccccaacagagcggagagttatacagtc
agacccaccctgctgcccttctgcatggagatgggttacatcagcactgtgtgcagcggc
ggtcagagctgtgcggtgctggcagaccagaacgtcatgggttttatctcagcaatccat
gagctggcctccagagaaagacagttttactgctggtcaagcaccgtcatggagcgcctc
ctcacaccactacgcaacagagagattgtgagtccgtcgttaggtgagccgtgcactcat
ctcttcttctctgtctgtgagagttttgttcgtctgagcgtcctgatcggtcgacactcc
acgtcactcagctacttcctgcatgatgtgcagggctgtgatgtcacttcccttcccctg
ctgacacatgctgagcactttatggacatatataaagagtattgttcgtcagtaggtgac
ttccacgtgatgggcggattccgatcactccataaactctcacttgagtgtttaggctct
cagcagaccatgctcgctcagctgtgtgtatcagaccagtctgtcagtggtgatgttgat
ctgggttccttgttgtactggcctctgcagcaactccaccagtatagccgagtcctgctc
aaactggcggcctgttacgatgtgttaactacagagtatcagtcccttcatcagggctgt
ggccagtatgactccctgtctttgtccttgttgaggaagaagaaggaggctgaaaccacc
ttcctcttctggaagacccactctggaaaaactactgaggtcctgcgtctcccacagcgt
cgtgtggtgtgtgaaagcagcaaccgatctctgactctgcagaatgctgggcggttctcc
aaccactggttcatattattcaatgacacactggtgcacacacaggctgccattccttct
cagagccttttctccacacatcacgtataccctctgacctgtctgtgggcaaaaccactt
accgaagacagcagcggactctatgcaattaaaattacatgtccagaggagagtttcacc
ctggtggcttcgacaccacaagaaaagaacaagtggctacggtctattaaccaggcggtg
gatcaggtgctgagtggtgcaagtcaggggtcgtcaccagggatgacagcaatgtctcgc
actgcctcttacacgttcaccggagaaggccggtttaaagacgcccaatacaacgggagc
tggctggcaggacgagttaatggcagaggcaccatgaagtggccagatggacggatctac
aacgggaactttaagaaagggcaggaggatggctatggagagtgtataatacctaacaaa
gtattgaaaaagccagacacctaccaaggacactggagagatggcaagatccatggtttc
ggcaagtacaagtatgccagtggtgaggtgtacgagggctgtttctgtgatgggcaccgg
catggttatggcatgctgagctccggaaggctgaccaagaactcctccagcgttttcatt
ggccagtgggtccacgacaagaagacgggatatggagtctacgatgacatcacaagaggt
gagaagtacatgggactgtggttggacgagcagcggcatggcagcgctgtggttgtcacc
cagtgtggtgtgtactatgaagggaccttcagagacaacaagatgagtggtccaggtttg
ttgatgtcagatgacgacaccgttttacatggggagttttctgatgactggactgtcaac
gggaagggtgttttattccaggctaatggtgactgtctgcagggcctgttcagtggagag
tggaccacagggctgaaggtggttggaacttacaccaaactagctgcagatgaaccagaa
aacaaagagagaaacagcctgctcaagctgggtcagtacatggtgcctgcaggtcagagg
tggctctgtgtgtttgatgaatgttggagtcgactgggctgtgatgctcctgggagagga
gagaggtctgtggcctgggacaacattgctgttaccataacaactgcacgacgacaaagc
ccagatctcagtaggtctcagcgtaaagtattggagtgtttggagtgcattcctcagcac
ggagaaccggtgaccaccgcaaactatgacaacatacgaagatacctcatcaaggcgtgt
gagacccctcatcaccctctgggctggctggtggagacgttggtgacggcctacaggatg
acttacgtcggcgtaggatccaaccgcaggctgctcaaccaggccgtccaggaggttctg
gcctaccttacgcatttctacagcattgtcaggtttctgttttcgggattaccagatgat
ggcggcatcatccctgagccccctgcctctccatctcgaagcagacacagctctaaaata
gcagagcaaaacagtgttgtggtggtgagttgctcgtctctgctcctcccacagctgctt
cctcgactctaccctcctctctttaccctgtactgcctgcaggaggagcagaaggaggcc
cagtactgggagcgcatcctccgactcaacaaacagcccgaccagtcactgctcagcttc
cttggagtgcaggagaagttctggcccgtgtggatgtcaattctgggagagaaaaagcag
attgtgtccagcagtaaagatgcgtgctttgtttttgctgtagagacactccaacaaatc
agcaccaccttcactccgtcagacaaactcctcgtcatccagaagacatttgaggaactg
acccaggaagtaaaacctatgctaaatagcaacttcctgtggtgcatggatgacctgctc
cctctcttcctctatgttgtgctcagggcaaggatcaggaacctgggagcagagatcagt
ctgatagaagatttaatggatcccaacgttcagcacggagagatgggactgatgttcacc
acactgaaggcctgctacatccagatccagcatgagtcggctatgtag
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