Etheostoma spectabile (orangethroat darter): 116698035
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Entry
116698035 CDS
T08457
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116698035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116698035
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116698035
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116698035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
116698035
NCBI-ProteinID:
XP_032385647
LinkDB
All DBs
Position
11:7258509..7285610
Genome browser
AA seq
690 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAASYSKAMTSPGDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHHVAALGDRFDKLKKSPGRFLYVVGRDHSHQE
ADQQALDSNLSSLIKRTSELESLMGKLIQTCQHVEVNASRQENKLLEECDQLINIIQQRR
QIIATKIKEGKSVRMRKLAQQIASCKQCIERSSSLITQADQTLKETDHTRFLQTAKSTCE
RVSMATASSQILLPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPVIREELCTASYD
TITVHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADNWMIVPNIKQNHYTVHGLQCGT
KYIFILKAINQAGNRSSEPGKLKTNSQPFKLDPKSAHRKLRLSHDNLTVERDETSSKKSH
SQDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKQEWVGKNSASWVL
SRCNNSWVVRHNSKEMPIEPSPHLRRLGVLLDYDSGSLSFYDAVGTQHLHTFDVAFAQPV
CPVFNVWNRCLTVLTGLPIPDHLEGTDYNN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaattgacctgcccaatctgtctggagctctttgaggaccca
ctgctcttgccctgtgctcacagcctttgtttcaactgtgcccatcgtatcctggtgtca
cactgcacgcccagcgagccaattcagtccatcagcgcatttcagtgtccaacctgtcgc
tatgtcatcaccctcaaccagaggggcctagagggactcaaacgcaacgtcacattacag
aacatcattgaccgctaccagaaggcttctctaagtggacccaattctcctaacgagact
cggcgcgagcgagctgcctcgtacagcaaagccatgacttccccaggggaccgtgtacag
tgccagttttgtgagcaggaccctccgcaggacgctgtgaagacctgtgtcacctgtgag
gtgtcatactgcgatgagtgtctcaaggccacccaccccaacaagaagccgttcacgggc
caccgtctaatcgagcccttgctggactcccatctgcgagggcttatgtgtctggagcat
gaggatgagaaggtcaacatgtactgtgtgacagatgaacaattgatctgtgcattgtgt
aagctggttggccgacaccgggaccaccacgtggcagccctcggtgaccgatttgacaaa
ctcaagaaatcacctggccgctttctctatgtggtggggcgtgatcattcacaccaggag
gcagaccagcaagctttggattccaacctcagcagtctaatcaagaggacaagtgagttg
gaaagtctgatgggcaaactcatccaaacctgccaacatgtggaggtaaacgcgtcgcga
caagaaaacaagctgctggaggagtgtgaccagctgatcaatatcatacagcagcggaga
caaataatagctaccaagataaaggagggcaagtctgtgcggatgaggaaactagcccag
cagatagccagctgcaagcagtgcattgagaggtcctcctccctcatcactcaggcagac
caaactctcaaggagacggatcacactcgcttcctccaaacggccaaaagcacctgtgag
agagtttctatggcaacagcttcctctcaaatcctgttaccagaaattaacctgaatgat
acctttgatacttttgcgttggacttcacaagggagaagaaaatgcttgaaagcttggat
tacctcacagcaccaaatccaccagtaatccgtgaggaattatgtacagcttcatacgac
acgatcacagttcactggacatcagatgacgaattctctgtcgtatcatatgaacttcag
tatgccatctttaccagccaatctaatgttgtcagtttgtgcaactctgctgacaactgg
atgatcgtaccaaacatcaagcaaaatcactacactgtgcacgggcttcagtgtggcaca
aagtacattttcatactgaaggccataaaccaggctggaaaccgcagcagtgaaccaggg
aaactcaaaaccaacagtcaaccattcaagttggacccaaagtcagctcaccggaagctg
aggttgtcccatgacaacctgactgtggagagggacgagacgtcatccaagaagagccac
agtcaggaccgcttctccagccacagcagctacggtgtcacaggaaatgtctacatcgac
agcggccgccattactgggaagctctgataggaggaagcacatggtttgcagtaggcatt
gcctacaagtcagcaccaaaacaagagtgggttggcaaaaactctgcatcctgggtactg
tctcggtgcaacaactcgtgggtggtacgtcacaacagtaaggagatgcccatcgagcct
tcaccgcacctgcgtcgtctcggagtgctgttggactatgactctggatctctgtctttc
tacgacgctgtcggcactcagcacttgcacacatttgatgttgcctttgctcagccagtc
tgccccgtgttcaatgtctggaacaggtgtttaacagtcctcactggactgcctatccca
gatcacttagaggggacagactacaacaactga
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