Etheostoma spectabile (orangethroat darter): 116698049
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Entry
116698049 CDS
T08457
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116698049
Membrane trafficking [BR:
esp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116698049
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
116698049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Lgl_C
WD40_Prp19
Synaptobrevin
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_DCAF4
DUF3919
Motif
Other DBs
NCBI-GeneID:
116698049
NCBI-ProteinID:
XP_032385670
LinkDB
All DBs
Position
11:14863420..14947020
Genome browser
AA seq
1085 aa
AA seq
DB search
MWKRAIKLSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVQWDLRLKKADFRIYYDEAIH
SVSWHHEGKQFMCSHSDGSLSIWNLRNTTKPFQVTFPHGKIQKDGRKESCKPILKVEYKT
SRNSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMALCETPYNNEVQEP
YAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFADCPPDIIPILYSIGVK
HKKTGYSQKEWPVGGGTWTLGSHTYPEIIITGHADGSIKFWDASAITLQMLYKLKTSKAF
MKPKPSEGRAADLVEDDPFAIQMVSWCPQSRIFCVVGISAHIILYRFSKYDANTQIVSLE
VRLQCEAEDVISPSENENNPCFTESGSHSPQPHHQHAASPGSGTTEGNKDSNPCLKVKDR
MVRVPPGYQAELVIQLLWADGEPPQQITSLDINSAYGLLAFGNCNGLAVVDYLQKTILLC
MSTLDLYGAADPYQRLTRSPRRNRQSTSEFCMRGLSNLYSDSKKRIRTSYQSLTELSDNQ
QSIDTDRSKSPTSVHYSTSLHNDPRVLPEPVVSLRASHCSPVFYLLDNVKGPGRKLSLPT
DLKTDLDHVNGHCTSPTSQSCSTGKPRVPMGPEGPRLTRRGPGRPPFRKAQSAACMEISL
PVSHTEGYASRRAMLQQLHGVAMYSHDEHHATAPYCWSERAAATESRENSFSRSRSSSVS
SIDRDTKEAVTTLQFGESYARKSDTLPTPCLWVGTSLGMVLLIPMSIPTDNEERMEEPVT
IGPSGTVLTLKGSVLRISFLDCMGALIQSPYEVWRDLNAHEDPDRMRRRKLIHISPSSSQ
HTCGEGHLAVVCSEKQAKVFLMPSQSCLFVHNITESSFVLRADVVSVCNSVCLACFCANG
HVMTLSLPSLRPLLDVNYLPLADMRIARTFCFTHGGQALYLSSPTEIQRITYSQEMCDNL
QEMLGELFTPIETPEAQNRGFLKGFFGGNSHNFDREELFGEAAAGKGSRSLAQHIPGQAG
MEGMKVAACGVVGDLARARIALDERGQRLGELEERTALMMTSAETFSKHAHEVMLKCKDK
KWYQL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaagggccataaaactatcaactaaaactcatccaggacctgtggttcattta
agtgacagcccaaaggatgaaggcaagctgcttatagggtttgagagcgggacaatcgta
caatgggacctccggcttaagaaggccgacttcagaatctactatgacgaggccatccat
tcagtcagctggcatcacgaagggaagcagttcatgtgcagtcactcagacggcagcctg
tcgatttggaacctcagaaacaccaccaaaccattccaagtcaccttccctcatggaaag
atacagaaggatgggaggaaggagtcgtgtaaacccatacttaaagtggagtacaagacc
tcaaggaacagcgagccttttgttatcttctctggcggtctttcatatgacaaggcaggg
cggcggccaacgttaaccatcatgcacggcaaggccattactgtgctggagatggactat
cctattgtagagttcatggcactctgcgagactccttataacaacgaggtccaggaacct
tacgcagtggtggtgcttttggagaaggacttaatcgtggtggatctgacacagagcaac
ttccctgtctttgagaatccttaccctatggacatccatgagtctccagttacctgcact
gcctattttgcagactgtccgcccgacattatacccatcctctactcgataggagttaaa
cataagaagaccggctacagccaaaaggagtggccagtcgggggaggaacatggacgtta
ggctcccacacttacccagagatcattatcacaggacatgctgacggatcaattaagttt
tgggacgcatcagcaatcacactacagatgttgtacaagctgaagacctccaaagcgttc
atgaagccaaagccaagtgagggcagggcggctgatttggtggaggatgacccctttgct
atacagatggtcagctggtgcccccagagtcgcatcttctgtgtggttggcatctcagcc
cacatcatcctgtatcgcttcagcaaatatgatgccaacactcagatagtgtcactagag
gtgcgcttacagtgtgaggcggaggacgtcatctctccatccgagaatgaaaacaatccc
tgcttcacagagtccggctcccactcaccacaaccccaccaccaacacgcagctagcccc
ggcagtgggacaactgagggtaacaaagacagcaatccctgccttaaggtgaaggacagg
atggttcgggtccctcctggctaccaagcagagctggttatccagctgctgtgggcagat
ggagaacctccgcaacagatcaccagcctggacatcaactctgcctatggccttttggcg
tttgggaactgcaatggcctagcagtggtggattacttgcagaaaaccatccttttgtgt
atgtcgacactggatctatatggagccgcggatccataccagcgccttacccgctcccca
cgcaggaacagacagtccacatcagagttttgcatgcgcggcctgtctaacttatattca
gattcaaagaaaaggatccgtacatcctatcagagccttactgaactctctgacaaccag
cagtccattgacacggatagaagcaagtcgcccacctcagttcattactcaacctccctt
cacaatgacccacgcgtcctgccagagcctgtggtcagtctgagagccagccactgcagt
ccagtcttttacttgctggataatgtaaagggacccggcagaaagttaagtctgccaaca
gatcttaagactgatcttgatcatgtcaatggacattgcactagtcccacctcccagtcg
tgctcgacagggaagcctcgtgtcccgatgggtcccgaggggccacggcttacccgcaga
ggccctggccgaccgcccttccgcaaggcccagtccgctgcttgcatggagatctctttg
cctgtgtcccacactgaaggttatgcatccaggagggcaatgcttcagcagttacacgga
gtcgctatgtactcccacgacgagcaccacgccactgccccctactgctggagtgagaga
gctgccgccacagagagtcgtgaaaactccttcagccgttcacgcagttccagtgtgtcc
agcattgaccgcgacaccaaagaagctgtcaccacactgcagttcggagagtcctatgca
cgcaagagtgacaccctgcccaccccatgcctctgggtgggcaccagcttaggcatggtc
ttgctcatcccaatgtccattccaaccgataacgaggagaggatggaggaacctgtgacc
atcggccccagcggcacagtcctgacgctgaagggctcagtgttgcgcattagcttcctg
gactgcatgggagcgctcattcagagcccctacgaggtttggcgggacctcaacgcccat
gaggaccctgaccgaatgcggaggcgcaagctgatccacatttcaccgtcatcctcccag
cacacctgcggagagggacatctggcggtggtgtgctccgagaagcaggccaaagtattc
ttgatgccctcacagtcttgcctctttgtccacaacatcaccgagtcatcctttgtactg
agagccgacgtggtatctgtgtgcaacagtgtgtgcctggcctgcttctgtgctaacggg
cacgtcatgacactcagtttgccaagtctaagaccgcttttggatgttaattacctgcct
cttgcagacatgcgcattgcaagaaccttttgctttactcacgggggtcaggcattatat
ctcagctccccgacagagatccagagaattacatacagccaggagatgtgtgacaacctg
caggaaatgctgggggagctgtttacaccaatagaaacaccagaagcccagaaccgaggc
tttctaaagggcttctttggaggaaattctcataactttgacagagaggagctctttggt
gaggcagcagctgggaagggttctcgtagtctagcccagcatatccctgggcaggcgggg
atggagggcatgaaggtggcagcttgcggagtggtgggtgatctggcacgggcgcgcatt
gctctggatgagagaggccaaaggctgggagagctggaggagcgaaccgccctaatgatg
accagtgccgaaacgttctccaaacacgctcacgaggtgatgctaaagtgcaaggacaag
aagtggtaccagttgtaa
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