Etheostoma spectabile (orangethroat darter): 116698052
Help
Entry
116698052 CDS
T08457
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1 isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116698052 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116698052 (gtf2e1)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
116698052 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
116698052 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF1272
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
116698052
NCBI-ProteinID:
XP_032385688
LinkDB
All DBs
Position
11:14758477..14771509
Genome browser
AA seq
447 aa
AA seq
DB search
MQEKMIEPELLTEVPAALKRLAKQVVRGFYGVEHALALDVLIRNPCVGEEDMLELLKFDR
KQLRSVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRVLVNVVKYKLDHMRRRIET
DERDSTNRASFRCPCCFSTFTDLEANQLFDPMTGTFHCTFCQTEVEEDASVCPDGRTLVA
RFNEQIEPIYALLRETEDVNLSQDLLEPEPSEIPALKQSRDRAAATAAGANSGPHREAWS
NKGATYADMYTQNVVISMEEQEDQQKQANEGKAPKERPVWLTQSTVQGAYSEPDILKNRG
DVVPGAQDVAAGHGIGQVDENEEVMRALLIHEKRGATGGGGASTATKGLVSATTNASDSE
SDTSESGDDSPLGPPPATATQHRAAEEEEEDDDEFEEVGDEPMVMVGGRQFSYREVSQRP
ELVEQMSAQEKEAYIEMGRNLFHDMYF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagaagatgatagaaccagagctactgaccgaggtccctgcagcacttaagcgg
ctagccaagcaggtcgtaaggggtttctatggagttgagcatgccttggccttggatgtg
ctcattcgtaacccatgcgtaggggaggaggacatgctggagctgctcaagtttgatcgt
aaacagctgcgctcagtacttaacaccctgaaggcagacaagtttgtcaagtgtcgcatg
agagtggaaacggcccctgatggaaagacaacacggcacaactactacttcatcaactac
agggtactggtcaacgtggtcaagtataaattggatcacatgcgacggcgcatcgagacg
gatgaacgagactccaccaaccgtgcctccttccgttgcccctgctgcttctccaccttc
actgacctagaggccaaccagctgtttgaccccatgacaggtacatttcactgcaccttc
tgccagacggaggtagaagaggacgcatctgtgtgtcctgacggcaggacactagtggca
cgcttcaatgagcagatcgaacccatctatgcgctgctacgtgagaccgaagatgttaac
ttgtcccaggacctgctggagcctgagccttctgagattcctgctctcaaacagagccga
gaccgggctgctgctacagcagcaggcgcaaactcaggcccacaccgtgaagcctggtcg
aacaagggcgcaacgtacgctgacatgtacacccagaatgtggttatcagcatggaggaa
caggaagaccagcagaaacaggccaacgaaggcaaggcacctaaggagaggcctgtctgg
ttgacccagagcaccgtgcagggtgcttacagcgagcctgacatcctcaagaaccgtgga
gatgttgtacccggagcccaggatgtagcggctggtcatggaattggtcaggtagatgaa
aatgaggaagtgatgcgcgccctgctcatccatgagaagaggggtgcaacaggtggaggc
ggagcaagcactgctaccaaggggcttgtctccgccacaactaacgccagcgactccgag
agcgacaccagcgagtcaggcgacgactctcccttgggtcctccccctgccacagctact
cagcatcgggccgccgaggaggaggaagaggacgatgatgagtttgaggaggtgggggat
gagccgatggtaatggtgggaggccggcagttctcataccgagaggtcagccagaggcca
gagctagtggagcagatgtctgcacaggagaaggaggcctacattgaaatgggacgaaac
ctcttccatgacatgtacttctga
DBGET
integrated database retrieval system
