Etheostoma spectabile (orangethroat darter): 116698131
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Entry
116698131 CDS
T08457
Symbol
edar
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116698131 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
esp04050
]
116698131 (edar)
Cytokine receptors [BR:
esp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116698131 (edar)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
DUF2852
Motif
Other DBs
NCBI-GeneID:
116698131
NCBI-ProteinID:
XP_032385801
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All DBs
Position
11:12838880..12874649
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AA seq
521 aa
AA seq
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MSERRGQKKSIFLSSLLVCCMFASAEYTSCGEYEFFNQTSNSCQACPQCQPGQEPHMTCG
YGVKDEDFTCVSCPQGKYSKGKYEICRRHKDCDALYKATIRAAGTPDSDAECGPCLPGYY
MLENRPRNLYGMVCHSCQNAPRNTKECMSTSGPREKPVIDPGSTTXFPHPHKDSTGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKKDIPD
NVVIYSEKDEFDKLKAAPQKTVKSENDASSENEQLLSRSIDSDEEAASDKQGTAETNNPN
LCLVNLGNKPDLCLLSRGLLEQDRACNGAPTLAAGQANNIPSPNHIGNVNHITSTNHISS
VNAINNNNKTPGMLQNRRKKILDLYGRACNVTEGLSPTELPFDCLEKASRMLSSSYSSEA
AVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESLC
SDVLGSSEMAAAAGRQGNSSFHSQLVCPSPCPSPSQRCASV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaggagaggtcagaagaagtccatttttctgtcctcattattggtgtgttgt
atgtttgctagcgcggagtataccagctgtggagagtacgaattcttcaatcagaccagt
aacagttgccaggcctgccctcagtgccagccaggacaagagccgcacatgacctgtggt
tacggtgtgaaggatgaggactttacctgtgtgtcgtgcccacaggggaaatattctaaa
gggaagtatgagatctgcagaaggcataaagactgtgatgccctctacaaagccactatt
cgcgctgcgggaactccggacagcgacgctgagtgtggaccctgtttaccagggtattac
atgctggaaaacagacccaggaacctctatgggatggtttgccactcctgccagaacgca
ccacgcaacactaaagaatgcatgtcaaccagtgggccaagagaaaaacctgtgattgac
cctggcagtactacgnttttccctcatccacataaagattctacaggacaaggtcaccta
gcaacagctctcattattgccatgtcaaccattttcatcatggccatagccatcgtcctc
atcatcatgttttacatcctgaaggccaaaccgagtggccaggcatgttgttccggacaa
gttgtgaaggcagtggaagctcagaccaacaaacaggaagacaagaaagatatccctgac
aatgtggtgatctactcggagaaagatgagtttgacaaactgaaagcggctcctcagaag
acagtgaaaagtgaaaatgatgcctcatcagagaacgagcagctgttgagccgtagtatc
gacagcgacgaggaggccgcgtctgacaagcaaggaacagccgagaccaacaaccccaac
ctgtgcctcgtcaatctgggaaacaagcccgacctctgcctgctctctcggggccttttg
gagcaagaccgggcctgcaacggggcccccaccttggcagcgggacaggccaataacatc
ccgagtcccaaccatatcggcaatgtcaaccacatcaccagcaccaaccacatcagcagt
gtgaacgcaatcaacaacaacaataaaaccccggggatgctacagaatcgaaggaaaaag
atcctggatctgtatggcagagcctgcaatgtgacagagggcctgagccccacagagctt
cctttcgactgtctggagaaggccagccgcatgctgagctcctcctacagcagcgaggcg
gccgtggtgaagacgtggaggcatctggccgagagcttcgggctaaagcgtgacgagatt
ggcggcatgagcgacggtctgcagctctttgagagagtgagcacggcgggctacagcatc
cctgacctcctgacccgcctggtacagatcgagaggctggatgcggtggagtcgctctgc
tcagacgtgctgggcagcagtgagatggcggcggctgccggacggcagggcaacagcagt
tttcacagccagttggtctgtccatccccatgcccatctccgtcccagcgctgcgccagt
gtctaa
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