Etheostoma spectabile (orangethroat darter): 116698377
Help
Entry
116698377 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116698377
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116698377
Enzymes [BR:
esp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116698377
Peptidases and inhibitors [BR:
esp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116698377
Ubiquitin system [BR:
esp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116698377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
116698377
NCBI-ProteinID:
XP_032386188
LinkDB
All DBs
Position
11:complement(2529897..2575729)
Genome browser
AA seq
2484 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIDMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKSSWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLNLKDKGAKGPGLSLIRKSLPGQGLRGCNLNCHEKNSSIKHGAGWGLLNALKI
AKTLXHAVGFGHVKAVAEACQPNAEGNIPVSPINQATHDQALVLQSALQNIPNPASECML
RNVAIRLAQQISDEVTENNFFQASKYIPDICVIRAVQKIVWASGCGTVQLVFSSNEEISK
IYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPTALDTLSKEKAWQTFIIDLLLHCHSK
SVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAKHAGDYFTLLRHLLNYA
YNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAFQTPEKK
YYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSGEFPTEQAIPVCSTPASINAGFELLV
ALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEYLPPVGPRPNKGFVGLKNAGATCYMNSV
IQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQENESNVDPRDEVFSYHHQFDDKPSSK
SEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNS
LVDSLDEALKALGHPAMLSRVLGGSFADXKICQGCPHRYECEESFTTLNVDIRNHQNLLD
SMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKF
NDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVIQQNEPSEPTPPGSSKYRLVGVLVHS
GQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDEEEMKNQCFGGEYMGEVFDH
MMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVKYISELTISSTKPHQVKMPGVIECSV
RKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISAQLAARF
LFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRYWFAHKVLFAYPNRFSEYLLECPSAE
VRGAFAKLIVFIAHFSLQDGPCPSPTASPGPSTQGCDNLSLSDHLLRAVLNLLRREVSEH
GRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFMLVALDEGPGPPIKYQYAEXGKLYTV
VSQLVRCCDVSSRMQSSINGNPPLPNPYGDTNLTAPVMPVQQLVAEILFVRTSYVKKIIE
DCSNSEETVKLLRFSCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQ
THRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDL
KRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKAC
ELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPEDTSLYPHSPGTTQFQQNNHPHGQPYTG
PAAQHMNNPQRPGPASAPTPGPTQTTPTPGPGPTPGPGPRAQENWESTEDVAPAPAPTPA
PAPAPASAPAPTTSTTPTPAPPKE
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaccacgcgtggctctccggtggggggcaatgacagtcagggccagggccag
gcacctgatgctcagagccagccccccctaccacagaaccagacatcatctccgaactca
tctaatgagaactctccagtaagcccaccagatgagcagggccagggagatggcccccct
cagctggaagaggaggagcccgccttccctcacactgacctagccaagctggatgatatg
atcaacaggcctcgttgggtcgttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctattgacctgagtaaaaaaggactggatgtgaagtgtgaggcatgtcagagg
tttttccgagatggtctgaccatctccttcacaaagatcctgacagacgaggcagtcagt
ggctggaagtttgagattcataggtgcatcatcaataacacacaccggttggtggaactg
tgtgtggccaagctctctcaggactggttccctctactggagctgctggccatggccacc
aaccctcactgcaagttccacatctacaatggcacacggccctctgagactgtccccgct
ggagcacagctggctgacgatgagctcttcgcccgaccaccagacccacgctctcctaag
ggctggttggtggacttaataaacaaatttggaacgttaaacgggtttcaaatgttgcac
gatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaagcct
tttggccagtgttacgagttcctcacattgcacacggtaaagaagtacttccttccagtc
atcgacatggttccccagtttctagagaatcttacagatgaggagctaaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtccatgataatcaagtctctgaagaatctggct
tctcgtgtaccagggcaggaggagaccgtgaagaatttagagatttttagattgaaaatg
attcttaggttattgcaaatttcttcttttaatggcaaaatgaatgcactaaatgaagtt
aacaaggtgatctccagtgtgtcctactacactcatcggcataaccctgaagaggaagag
tggctgactgcagagcgcatggcggagtggatccagcagaaccacatcctgtccattgtg
ctgagggacagtttgcaccagccgcagtatgtagagaaactagagaagatccttcgcttc
gttatcaaagaaaaagctcttacaatgcaggatctggacaacatctgggcggcacaggcc
ggtaagcatgaggccattgtgaagaatgtccatgacctcctggccaagctggcatgggac
ttctcacctgagcaactcgatcacctttttgactgtttcaagtcaagctggaccaatgcc
agcaagaagcagcgtgaaaaactgctggaacttatccgtcgcttggctgaggatgataag
gatggggtgatggcccacaaggtcctcaacctgctgtggaacctggcacacagcgatgat
gtgcctgtagacatcatggaccaggctcttagtgctcacatcaaaatattagattacagt
tgttcacaggacagagacacacagaagattcagtggatagatcgcttcatagaggagcta
cgaaccaatgacaaatgggtgatccctgccctgaagcaaataagagaaatctgtagcctc
tttggagaagcccctcaaaaccttagaaagaaaatgccaattaacatacaaacgaactta
gtgggtcaaacccagagaagtcctcatgtgttttaccgccatgacctgatcaaccaacta
cagcacaaccatgctctggtcacgctggtggctgagaacctctcggcctacatggagacc
atgaggcagttctccaaagaagaacaagctgagtttgacccccagacggtccgaccagga
agccgctacagccatgtacaggaagtgcaggaaagacttaacttcctgaggttcctgctg
aaagatggccagctgtggctatgtgcccctcaggccaaacagatctggaagtgtctggct
gagaacgcagtgtttctgtgtgaccgtgaggcctgcttcaaatggtactctaagctgatg
ggtgatgaaccagatctggacccagacatcaataaggacttctttgagaacaacgttctg
cagttggacccatctctgctgacagagaatggcatgaaatgctttgagaggttctttaag
gctgtcaactgcagggaaggcaagctggtggcaaagcgcagggcctacatgatggatgac
ctggaactaataggcttggactacctctggagggtggtaattcaaggaagtgatgacatt
gccagcagagctatagacctgctgaaagagatctacaccaaccttggaccaaaactgcaa
gtcaatcaggttgaaattcacgaagatttcattcagtcatgttttgaccgtctgaaggcg
tcctatgacaccctgtgtgtgttagatggagacaaagacagcatcaactgcgcccgtcag
gaggctatccgcatggtgcgagttctcactgtgctcaaagagtacatcaatgagtgtgac
agtgactatcacgaggagaggactatactgcctatgtcaagagctttccgtgggaagcat
atcacattgattgtccgtttccccaaccaggggcgtcaggtagatgacttggatatctgg
tcacacactaatgatacaatcggctcggttcggcgtggcatcctcaacaggatcaaagct
aatgcagcacataccaagattgagctcttcattggtggggaggttgttgatcctgctgac
gacaggaagctgattggacagctcaatttgaaggacaaaggggccaaaggccccgggttg
tcgctcatccgcaaatcccttcctgggcaggggctgaggggctgcaacctcaactgccat
gaaaaaaattcctccatcaaacatggggccggctgggggttactcaatgcgcttaaaatc
gccaaaactctcncccatgctgtaggttttgggcatgtgaaggctgtggctgaggcctgc
cagcccaacgctgagggaaatatacctgtctcaccgattaaccaggccactcatgaccaa
gccctggtcctccagagtgccctgcaaaacatccctaatcctgcctcagaatgcatgcta
cgcaatgtagccatccgtctggcccagcagatctccgatgaagtaacagaaaataatttc
ttccaggcatcgaagtacatcccagacatctgtgtgatccgagcagtacagaaaatagtg
tgggcatcaggctgtggtacagtgcaactcgtcttcagttcaaatgaagaaatcagcaag
atatatgagaagacaaatgcagctaaggagccagatggggaagatgagcaggtgtgttgc
gaggccctggaggtgatgacactgtgttttgcccttatgcccacggctctggatactctc
agtaaggagaaggcttggcagaccttcatcatagacttgctgctacactgccacagcaaa
tctgtgcgtcaaatggcccaggagcagtttttcctgatggcaactaggtgctgtatgggc
catcgacctctccttttctttatcacccttctcttcactgtgctggggagtacagccaag
gagcgagccaaacatgctggagactacttcactttactcagacatcttctgaactatgcc
tataacagcaacatcaacctgccaaatgctgaggtcctgctcaacaatgagattgactgg
ctgaagcggataagggatgaggttaagaggacaggggagactggtgtggaggagaccatc
ctggagggtcaccttggggttaccaaagagcttctagccttccaaacaccagagaagaag
tattacattggctgcgagaaaggaggagcaaacctcattaaggagctgattgacgacttc
atcttcccagcatctaatgtgtacctgcagtacatgaaaagtggggagtttcccactgag
caggccatccctgtgtgcagcacccctgcttctatcaacgctggctttgagctcctggta
gcactggctgttggatgtgttcgcaatctcaagcaaatagtcgacaccctgactgacatg
tactacttaggttgtgagacactgaccgagtgggaatacttgcctccggtggggccacgt
cccaacaaaggctttgtgggtttgaagaatgccggggccacctgttatatgaactctgtc
attcagcagctgtacatgattcctccaatccgcaatggcatcctggccattgagggcaca
ggcactgatgtggatgatgacatgtcaggggatgagaagcaggagaatgagagtaacgtg
gatcctcgtgatgaggtgttcagctaccaccatcagtttgacgataaaccctccagtaag
tcagaggacaggaaagagtataacattggagtactacgtcacctacaggtcatttttgga
catctggctgcgtccagacttcagtactatgtccccaggggattctggaaacagttcagg
ttatggggtgagccagtgaacttgcgggagcagcatgatgctctggagttttttaactct
ttagtggacagtctggatgaagctttgaaagccctgggccaccccgccatgctgagcagg
gtgctgggagggtccttcgctgacncaaagatctgtcagggatgcccccacaggtatgag
tgcgaggagtcgttcacaacactcaatgtagatatcagaaaccaccagaacctgttggac
tccatggagcagtatgttaaaggagatctgcttgagggagccaatgcctaccactgtgag
aagtgtaataagaaggtggacacggtgaagcgcctgctgataaagaagctgccacctgtc
ctggccatccagctgaagcgctttgactatgactgggagagggagtgtgccatcaagttc
aatgactactttgaattccccagggagctggacatggagccatacacggtagctggtgtg
gccaagctagagggtgatgacgtcaacccagagaaccaggtgatccaacagaatgagccc
tctgaacccacacctcccggaagttccaagtatcgtctggtgggagtgctggtccactca
ggccaggccagtggcgggcactactattcctacataatccagaggaacggaggcgatggg
gagaagaaccgctggtataagtttgatgatggtgatgtgactgagtgcaagatggatgat
gaggaggagatgaagaaccagtgctttggaggggaatacatgggcgaggtgtttgatcat
atgatgaaaaggatgtcgtaccggaggcaaaagcgctggtggaatgcctacattctattc
tatgagcgtatggactctttggacaaggacagcgagctggtcaaatacatctcggagttg
accatctcctccaccaagccacatcaggtcaagatgcctggtgtcatcgagtgcagcgtc
cgcaagcagaacgtccaattcatgcacaaccgaatgcaatacagcctggaatatttccag
ttcattaagaaacttctgacctgtaacagtgtctatttaaaccctcctccagggcaagac
catcttctgccagaggcagaggagattgctatgataagtgctcagctggctgctaggttc
ctcttcagcacaggttttcacaccaagaaagtagtaaggggtcctgccagtgactggtat
gacgccctctgcatcctgctgagacacagtaagaatgtacgctattggtttgcacacaaa
gtcctgtttgcttacccaaaccggttctcagagtatctgctagagtgcccgagcgctgag
gtccgtggtgcatttgccaagctcattgtctttatcgctcacttctccttgcaagacggc
ccgtgcccctcccccaccgcctcgcctggaccctcaactcagggctgtgataacctcagt
ctaagtgaccacctgttgagagctgtgctcaacctgctccgaagagaggtttcggaacac
ggccgtcacctgcagcagtactttaacctctttgtcatgtatgccaatctgggcctggca
gaaaagacccagttgttgaagctgaatgtcccagccactttcatgttggtcgctctagac
gagggtcccggccctcccattaagtatcagtacgctgagntgggcaagctctacactgtg
gtctcccagctggtccgttgctgtgacgtctcttcgcgcatgcagtcctcaatcaatggt
aaccctcctcttcctaacccgtatggtgataccaacctgacggccccagtgatgcctgta
caacagctggtagcagaaatcctgtttgtgaggaccagttacgtgaagaagataatcgag
gactgcagcaactctgaggagacagtgaagctgcttcgcttcagctgctgggagaaccct
cagttctcctccactgtgctcagtgagctgctctggcaggtggcgtactcctacacctat
gagctgaggccttacctggacttgctgctacagatcctactcatcgaggactcctggcag
acacacaggattcacaatgtgctgaagggcattcctgatgacagagatgggctctttgac
actatccagcgctccaagaaccactaccagaaacgagcctaccagtgcattaagtgcatg
gtggccctcttcagcaactgctctgtggcctaccagatcctacagagtaatggtgacctg
aaaagaaagtggacgtgggcagtggagtggttaggggacgagctggagaggaggccatac
acagggaacccccagtacacctacaacaactggtcccctccggttcagagcaacgagacc
tccaacggctatttcctggagcggtcgcacagtgcacgtatgacccttgccaaggcctgt
gaactttgtcccgaggagctcaagtgtactcagggaagcccagggaaggagccagatgaa
caggaagcaccggatgatcaagactcttccccacccgaagacacctctctgtacccacac
tctcctgggaccacacagtttcagcagaacaaccacccccatgggcagccgtacactggg
cctgctgctcagcacatgaacaaccctcagcgtcctggtcctgcctctgccccgactcca
ggcccgacccagaccacccccaccccaggtcctggtcccactcctggcccaggcccacga
gcacaagagaactgggagagcaccgaggacgtcgcccccgcccctgcacccaccccggcc
ccggcccctgcccccgcctcagcccccgcccccaccacctctactaccccaacgcctgcc
ccgcctaaggagtaa
DBGET
integrated database retrieval system
