Etheostoma spectabile (orangethroat darter): 116698403
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Entry
116698403 CDS
T08457
Symbol
itga6
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-6
KO
K06485
integrin alpha 6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04382
Cornified envelope formation
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04514
Cell adhesion molecule (CAM) interaction
esp04518
Integrin signaling
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116698403 (itga6)
04514 Cell adhesion molecule (CAM) interaction
116698403 (itga6)
04518 Integrin signaling
116698403 (itga6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116698403 (itga6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116698403 (itga6)
04810 Regulation of actin cytoskeleton
116698403 (itga6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116698403 (itga6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116698403 (itga6)
04515 Cell adhesion molecules [BR:
esp04515
]
116698403 (itga6)
04090 CD molecules [BR:
esp04090
]
116698403 (itga6)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116698403 (itga6)
Exosomal proteins of breast milk
116698403 (itga6)
Cell adhesion molecules [BR:
esp04515
]
Integrins
Integrin alpha subunits
116698403 (itga6)
CD molecules [BR:
esp04090
]
Proteins
116698403 (itga6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
116698403
NCBI-ProteinID:
XP_032386223
LinkDB
All DBs
Position
11:complement(8794238..8815207)
Genome browser
AA seq
1005 aa
AA seq
DB search
MLLLLHGGPSAVYVLLLFYSYLLEPTLVLAFNLDTSHVIRKDGEPGSLFGFSLAMHRQLN
PDERMLLIGAPRARALGKQTANITGGLYKCEITQSNHCERIEFDSKEDVLVENKENQWMG
VTVQSQGPGGKIVTCAHRYQRRLFVNTPQESRDIIGRCYVLSQDLSIDLSSDEDGGNWKF
CEGRARGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGVVRVEQKNNTLLEMGVYDD
GPYEVRDDHLFNPEFVPVPANSYLGFSLDSGHSITRSRGLTVVAGAPRANHSGAVVLLKK
ENEASARLLVEHTLYGPGLASSFGYDLAVVDLNGDGWQDIVVGAPQFYMKDRDIGGAVYV
YINQAGRWERITPVRLNGTKDSMFGLAVENIGDINQDTYEDIAIGAPYDDGSAGKVYIYH
GSAQGIKTSPAQILSGKEHNMRLFGYSLAGNMDLDSNSYPDVAVGSLSDTALIYRARTVI
SIRKDIKISPKEINLTVKTCGNSICFAVDACFTYKANPESYNPRLTVGYSLEADGDRRKQ
GLPARVTFLNKSRIETDYQFNGTLELRGQNQKTCIKITAKLKDNIKDKMRSIPIEVSAEI
AGAKRQKTRPGRSPQLSHFLVFFVFCICSKNNGPVFHLNHERKDLALRVTVNNMNEDDAY
EAKLVGTFPETLSYSGVRSHQTTMEKPIICTANQNGSQADCELGNPFKRDSKAIFYIILS
TVGMALDTTEIDXDLQLQTTSVQENIAPVKVKAKVIVELPLSISGEASPNQVSFGGVVKG
ESAMKTEEEIGSLITYTFRINNLWKSSVRASLHIQWPKWNKDGKWLLYLVKVTATGLEDI
LCSPESEINSLKHIQETSASRTKREIGERKTVGTMSSLSGKKKVLTCDSETKCVVLKCPL
QGMDGTAVKLRSRLWNSTFIEDYASISNLHIVVKASLVLHTKAKNMILRTPHTDFICHLL
KPLYTLAPLQCGFFKRASKDQYDAAYHKAEIHVQPSDKEKLSAEA
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgctgctactgctgcatggaggaccctctgccgtttatgtattacttttattttattcc
tatttattggagccaactttggtcctcgccttcaaccttgacaccagtcatgtcatcaga
aaagacggagagccggggagtctgttcgggttttccctcgccatgcacaggcaactcaac
ccggatgaaagaatgctgttgattggtgcacccagagcaagagctttgggaaaacagaca
gcaaacattacaggaggcctttataagtgtgaaatcacacaatccaatcattgtgagcgc
attgaatttgatagtaaagaggacgtacttgttgagaacaaggagaatcagtggatgggg
gtgacggttcagagccagggacctgggggaaagattgtgacttgtgctcatcgctatcag
aggcgcttgttcgtgaacacccctcaagagtcccgggacatcattgggcgctgttatgtc
ctgagtcaggacctgtccattgacttgtcctctgatgaggatggaggtaactggaaattc
tgcgagggcagagccagaggtcatgagatgtttggatcttgccagcagggtttggctgcc
accttcaccaaagactaccattatgtggtgtttggagcaccaggcgcttataactggaaa
ggcgttgtacgagtggagcaaaagaacaacactttgctagagatgggagtgtatgatgac
ggcccatatgaagttagagacgaccatctcttcaacccagagtttgttcctgtacctgcc
aacagctacctcggattctccctcgattcgggacacagcatcaccaggagtcgtggcctg
acggtggtggctggagcacccagagccaatcacagtggagccgtggtcctgctgaagaaa
gagaacgaggcctccgccagacttttggtggaacacactctatacgggccaggactcgcc
tcctcctttggatacgacctggctgtggttgacctgaacggtgatggatggcaagacata
gttgtaggagcccctcagttctacatgaaggacagagacatcggaggagctgtttacgtc
tacattaaccaggcaggaaggtgggaaagaatcactcctgtccgtctaaacgggaccaag
gactccatgtttggactggcagtggagaacattggagacatcaatcaagacacatatgaa
gacattgccatcggagctccctatgatgacggcagtgcaggaaaagtctacatttatcac
ggttctgcacaaggaatcaaaaccagccctgcacagatcctttcaggaaaagagcacaac
atgcgactctttggatattctctggcagggaacatggacttggacagtaactcttatcca
gacgtggctgttggttctctgtcggacaccgctctaatctacagggcacggacagtcatt
agcatcaggaaagatatcaaaatatctccaaaggaaattaaccttacagttaaaacctgt
ggtaacagcatttgctttgcagtggacgcgtgcttcacctataaagcaaaccctgaatct
tacaacccaagactaactgtcggctactctctcgaggcggatggcgatcgcaggaaacag
gggcttcctgccagagtgacgttcctgaacaaatcccgcattgaaacagactaccagttt
aacggcaccttggaactccgtggccaaaaccaaaaaacatgcatcaagataacagccaaa
ctgaaggacaacattaaggacaagatgcgcagcattcccatcgaggtgtctgcagaaatt
gccggtgctaagcgacagaagacgaggcctggacgtagcccacaattgagtcatttttta
gttttttttgttttctgtatttgcagcaagaacaacggtcctgtgtttcatctaaatcat
gagaggaaggacttagctctacgtgtgacagtcaacaacatgaatgaagatgatgcttac
gaagcaaagctggtggggactttcccagagacgctgtcatattctggagtccgctcacat
caaacaacgatggaaaagccgattatctgtacagccaatcagaacggctctcaagcagac
tgtgagctggggaatcctttcaagagagattcaaaggctatattttacatcatcctgagc
actgtgggtatggctctcgacaccacagagattgatnncgacctgcagctccaaacaaca
agtgtgcaagaaaatattgctcctgtcaaagtgaaggctaaagtaatcgttgaattgccg
ttgtcgatcagtggggaagccagccctaatcaggtttcctttggaggtgtagtgaaggga
gaaagtgcaatgaagacagaagaagagattggaagtctgattacttacacattcagaata
aacaacttgtggaagtcttctgtcagggcctcacttcacattcagtggcccaaatggaac
aaagacggtaaatggcttctgtacctggtaaaggtcactgcaacaggactggaggacatc
ctttgctctcccgagtctgaaatcaactctctcaaacacatccaggagacttctgcgtcc
aggacaaagcgtgaaattggagaaagaaaaactgttggcacaatgtcctccctgtcaggc
aaaaaaaaagttttgacgtgtgacagtgagaccaaatgtgtggtgctcaagtgcccccta
cagggcatggacggtacagcagttaagctgaggtctcgtctctggaactcaacctttatt
gaggattacgcctctatttcaaatttgcacattgttgtgaaggcctcgctcgtccttcat
acaaaggctaaaaacatgatcctgagaactcctcacactgattttatttgtcatctttta
aaacccctttacacccttgctccccttcagtgtggtttcttcaagagagcatcaaaagac
caatacgatgctgcgtatcacaaggcagagatccatgttcagccctctgacaaggagaaa
ctctctgctgaggcctga
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integrated database retrieval system
