Etheostoma spectabile (orangethroat darter): 116698421
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Entry
116698421 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin-like
KO
K05717
fibronectin 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04518
Integrin signaling
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
esp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116698421
04518 Integrin signaling
116698421
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116698421
09142 Cell motility
04820 Cytoskeleton in muscle cells
116698421
04810 Regulation of actin cytoskeleton
116698421
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116698421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116698421
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116698421
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116698421
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116698421
Membrane trafficking [BR:
esp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
116698421
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
116698421
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116698421
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
116698421
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
Fn3_Dep-1_3rd
NDNF
Fn3_Dep-1_4th
DUF4767
Arylsulfotran_N
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
116698421
NCBI-ProteinID:
XP_032386245
LinkDB
All DBs
Position
11:complement(15865127..15896404)
Genome browser
AA seq
2384 aa
AA seq
DB search
MSGSTIARVLVALCIGSAVNCMPKGTHRTRRQGQHHQVPSVSQDGCRENGQFYGINDQWE
RPYLGSTLVCTCHGIAGIKCKSKPEAEETCFDKINQQSYNVGETYERPKMLPRKPGYQPP
TLGYRPKTRPGHTPPFTGSPGGWKRDHASLHTTGLGTGSRVITNIQPVVYQPATLPEHAQ
EGPCRTDAGLSYFIGQRWIKNQGTKQMICTCLGNGVSCEQWDGPAPVYGGNSGGQPCVFP
FVYKGKTYHSCISDGRSDGQLWCSTSSDYETDQKYSFCTEKNVIVATRGGNSNGALCQFP
YLYNGRNYTDCTADGRRDGMKWCGTTTDYDAEQRFGFCPMADHEEVCTANEGVMYRVGDQ
WDKRHDVLGHMMRCTCIGNGRGEWSCVAYSQIKDQCIVDGLTYEVNQTFTKQHEEGYMMN
CSCFGQGRGRWKCDAIDQCQEPETRAFYKIGESWDKVIQGIMYKCYCYGNGIGELSCEPQ
QSYPGGSRPVQVIITESGNQPNSHPIQWNAPQSAHITQYILKWRVKNTRSPWREVMIPGH
LNSYTISGLKPGITYEGQLISVLRFGRREVTRFDFTTNYGSLATSQGETTQTPPMVDISE
SVTEITSSSFVISWVSASDTVSGFRIEYELSEQGQASGQPLVLDLPHTATSVNINELLPG
RKYTVNVYEITDSGENNLILTTSQTTAPDAPVEHEVEDVGETSMVISWEKPLAPITGYRV
VYTPSLEGESTELTLPDTATSVTXSDLLPGKLYNISIYSVEDSLESEPIFVQVHTAGDPL
PEEVTSPTDLQFFEVSDKKIVLTWSGPGSDVSGYRVTAVPVDESGSPQTEMTLPVSQNSY
IEVSHLQPGTLYRFHVYAIHNGEESLPLIGEQTTKPDAPTDIHFTNVTEDSAVILWFAPR
AKITGYRLLLSIEGSNPKQLHLPARLTQYTLLNLKPDTEYTATLHAEQDYTLSEGETAVF
TTNPPMGNAPHFSTDVTDTSIIISWTPVPRIEYKLTVRPSQGGEAPRDVTSDSGSIYVSG
LTPGVEYTYSVQPVINGHEQGTPVTRRVVTPLSPPTDLNLESNPSTGELTVQWNGASTPD
ITGYRVTCAPTNGQQGNSVEEFVEAGQNSCTLENLSPGVEYNISVVTVKDDMESTPISTI
ITPEVPQLTDLTFKDVSDTSISLRWSPLNTTTITGYRITVVAAGESVPIFQDMVQPTTGH
YTVYGLEPGIDYDISVITVTENGESEPTTVTQQTSVPAPTDLGFGQVGPDSMEVTWVAPR
VPHTADIKSFLVRYHPIDDDDDTTEINAGGSNNIVLRHLLPNTEYLVSVVCVYEQRESSP
LVGTQKTALDSPVGLRFSEIFTNSFTIHWLAPQSKITGYRMRYQMVSGGRAKDERLPPSR
NHFTLTGLTADTEYLVNIYAVSGTQESLPLSGKQKTISDAPTDLEVLDSSPTSITVRWDA
PPVTVRYYRITHGESGGHSNPKEFTVPGSQSTATINNLKPGTDYTITVYAVTGRGDSPAS
STPIYVMHKTGVDSPSEMEVMEVNDNSVTVKWSPAQGPIKGYRVTGVPRNGQGQSFSEVV
APDQTEITFSGLMPTVEYVLSVYALGQDGESSPLVVNALTNVDRPKDLTFSDIDSTSLKI
TWDSPEGIVTSYRVLYSSPEEGERELRPAPRGDAESTTIYGLQPGTEYTVKVIAVHDDTA
STPLVGTQATAISPPTNLQFSQVGPTSFTMRWAVPGQENRLTGLTGLTGYRVVVNPKNKS
GPTKEINLAPDATQAHISGLMVATAYEVHVYALKNSLTSRPVQGEVTTLENISPPRRVRI
SDVNDSSITLTWRSKTEPISGFLVEATPTTSLGYTPIQKTIGSDSRSFTITGLEPGTNYK
INIYTLKGNGRSAPLTLTATTAKPVVMPPTNIRFTSLNPNSISFTWEPSRSPGVTGYYVT
YEEAGGLPREVTPRPHAGQSYTIINGLKPGTEYVIKIVALQNALRSTPLVGKARTQPAPD
HHLLVPELPQLPVPHRPTTDILDVPESFNDKIFDTNHVHLSGTSGQNQPGQQGQHIYTEY
QSLGPNNGLHGPFSGPREGQRPTLREPLIYIPVAGPDGNRVPLVKVSEGPLPGLAFGFPD
NETELPHEAQTITTISWSGVPHTSEYEVSCNPITHLEERGFQMRLPGTSNSATLIGLTSG
ASYNVVVEAMRDGSKEKVLEEVVTVGNAVPGDIPISTNRDVCYDIFTQTYHEVGSEWERM
SETGFKLWCRCLGLGSGHFRCDSSKWCHDNNNNYRVGEKWDRQAENGHMMSCTCLGNGKG
EFKCEPHESTCYDDGKMYQVGNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGGQTDVDA
SLLQPVHSDTFDRYRENALRKLNIQCPXECLRPELLADANNPLD
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagcaccatagctagggtgctggttgcgctctgtatcgggagcgcggtgaac
tgcatgcccaaagggacgcacaggactcggaggcaagggcagcatcatcaggtcccctca
gtctctcaggatggttgcagagagaacggtcagttctatggtattaatgaccagtgggaa
cggccgtatttgggcagcactctggtctgtacctgccatggaatcgctggcatcaagtgt
aaaagcaaacctgaagcagaggaaacgtgcttcgataagatcaaccagcagtcctacaat
gtgggagaaacctatgagagacccaaaatgttaccgcgtaaaccagggtaccaacctccc
accttgggataccggcccaaaacgcgcccaggccacacccctcctttcacgggaagcccc
ggggggtggaaaagggaccatgcttcacttcacactactggcctgggcactggctctcgt
gtgatcactaacatccagcccgtggtctaccagcctgccactctgcctgagcatgcccag
gaaggaccctgtcggacagatgcgggactgtcgtacttcatcggccaacgctggataaag
aaccagggaaccaagcagatgatctgtacctgtcttggcaacggagtcagttgtgaacag
tgggatggaccagctccagtgtatggtggcaactctggaggtcagccctgtgtgtttcct
ttcgtctacaaggggaagacttaccactcttgtatctcggatggacgcagtgatggacag
ctctggtgttccacctcctctgactatgagacagaccagaaatattctttctgtacagag
aagaatgtaattgtggcaacacgaggcggtaattctaacggtgctctgtgccagttcccc
tacctctataacggccgaaactacactgactgtactgcagatggacgtagagatggcatg
aagtggtgcggcaccacaacagactatgatgcagaacaacgctttgggttctgtcctatg
gctgaccatgaagaagtgtgtacggccaatgaaggggtgatgtaccgcgtgggagaccaa
tgggacaaacggcacgacgttttgggtcacatgatgcgatgtacctgcatcggcaatggc
agaggggaatggagttgtgttgcttactcccagattaaagaccagtgtattgtagatggt
ctgacctatgaggtaaaccaaacctttaccaaacaacatgaggagggctacatgatgaac
tgcagctgctttggacaggggcgtggtcgctggaagtgtgatgccattgatcagtgccag
gagccagagacgagggccttctataagattggagagtcttgggataaagtcatccaagga
atcatgtacaagtgctattgctatggcaatggcattggagagctcagctgcgagccccag
cagtcctaccctggtgggagtcgtcctgtccaggtgatcataactgaatctggaaaccaa
cccaactcccaccctattcagtggaatgccccacagtctgctcacatcacccagtacatc
ctcaaatggagagtgaaaaacactcgcagcccatggagagaggtgatgatccctggccat
ctgaactcctacaccatctctggtctgaagccaggcatcacctacgagggtcagctaatc
agcgtgttgcgctttgggcgcagagaggtcacacgctttgacttcactaccaattatgga
tcattggcgacatcgcaaggcgagaccacccaaactccacctatggttgacatctcagag
tctgtgaccgaaattacctccagcagctttgtcatctcttgggtttccgcctctgacaca
gtttctggttttagaatagagtatgagctcagtgagcagggacaggcttctggacaaccc
ctggtgctagacctgccccacacagctacctcagtgaacattaatgagcttctacctggg
aggaagtacactgttaacgtctatgagattacagatagcggagagaacaacctaattctt
actacttcacaaaccactgcccctgatgctcccgttgagcatgaagtggaggatgtggga
gaaacttccatggtgatcagctgggaaaaacctctggctcccatcactggctatcgtgtt
gtttacacaccatcgctagaaggtgaaagcacggagctgactctccctgacacggcaaca
tctgtgactntgagtgaccttctacctgggaagttgtacaacatcagtatctactctgtg
gaggacagcctggagagtgagcctatctttgtgcaggtccacaccgctggagacccactg
ccagaagaagtaacttctcctacagacctgcagttctttgaggtgtccgataaaaaaatc
gttctgacctggtctggcccaggcagcgacgtctcaggttaccgggtcaccgctgtccct
gtggatgagtctggttctccgcagacggagatgaccctgcctgtcagtcaaaactcctac
attgaagtgtcacacctgcagcctggaacactgtaccgcttccacgtctacgccattcac
aatggagaggaaagtttaccactgattggggagcaaactaccaagcctgatgctcccaca
gatatccatttcaccaacgtgacggaggacagtgctgtgatattgtggtttgcccctcgt
gccaaaatcactggctaccgtcttctcctctccattgagggctctaaccccaagcagctg
cacctgcctgcccgccttactcagtacaccctcctcaacctcaagcctgatactgagtac
accgctacgctacatgccgagcaagattacacactcagtgaaggagagactgctgtattt
accactaatccaccaatgggcaacgctcctcattttagcactgatgtgactgacacctcc
attataatctcttggactccagttccccgcattgaatacaagttgacggtacgtcccagt
caaggcggagaagcccccagagatgtgacctctgactcaggaagcatttacgtttctggt
cttactccgggagtggagtacacatacagcgtccagccagtaataaacggccacgagcag
ggaaccccagtcacgcgccgtgttgtcacacctttgtctcctcctactgatctcaacctg
gagtccaacccaagcaccggagagctcacagtccaatggaacggggccagtacaccagac
atcaccggctacagagtgacatgcgctcccaccaatgggcagcaaggaaacagtgtggag
gagtttgtggaggcaggtcagaactcctgcaccctggagaatctcagtccaggagtggaa
tacaacatcagtgttgttactgttaaggatgatatggagagcactcctatatcaactatc
attacaccagaagtcccacagctgacggacctcaccttcaaggacgtgagcgacacctct
atcagtctccgctggtcaccgctcaacaccacaaccatcaccggttacaggatcacagtg
gtggcagccggcgagagcgtacccatctttcaagacatggttcagccaacgactggtcat
tataccgtctacggactggaacctggtatcgactatgacatcagtgtgatcactgtgacg
gagaatggcgagagcgagcccaccacagtcactcagcagacctctgtaccagcacccact
gatttgggctttggccaggttggtccagacagcatggaagtcacctgggtcgctccccgt
gtcccccacaccgctgacatcaaaagctttctcgtcaggtatcatcccattgacgatgat
gatgacactacagaaatcaacgcaggaggcagtaacaacatagtgctaaggcacttgctg
cccaacacagagtatctggtgagcgtggtgtgtgtgtatgagcaaagagagagctcgccc
ctcgttggcacccagaaaacagctctggattcaccagttggcctgcgtttctccgagatc
ttcaccaactcctttaccatccactggcttgctccccagagcaaaatcaccggttaccgt
atgcgttaccagatggtcagtggcgggagagccaaggatgagaggctgcccccgtccagg
aaccacttcaccctgacaggactcactgcagacacagagtacttggtcaacatctacgct
gtgagcgggacccaagagagcctgccgctcagtgggaaacagaagacaatctctgatgct
cccacagacctggaagtgctagactccagccctaccagcatcaccgtccgctgggatgcc
ccaccggtcactgtccgctactacaggatcactcatggagagtccggaggtcacagtaat
cctaaggagttcacagtgcctggctcgcagtccactgccacaatcaataacctgaagcct
ggtactgactacactatcaccgtctacgctgtgactggtagaggagacagccccgcttcc
agcactccaatctatgtcatgcacaagacaggtgttgactctccctctgaaatggaggtg
atggaagtaaatgacaacagtgtcacagtgaagtggagccctgctcagggcccaatcaag
ggatacagggtgactggggtccccagaaatggacagggacagtctttctctgaggtggtg
gctccagaccagacagagatcactttctcaggactgatgcccactgtggagtacgttctg
agtgtgtatgcacttggacaagatggagagagctccccactggtggtgaatgctttaaca
aatgtagaccgtcccaaggacctgacattctcagacattgactccacctcactgaagatc
acctgggacagtcctgagggaattgttacatcttaccgcgtcttgtattcaagtccagag
gagggtgagagagagctgcgccctgctccccgaggagatgctgagtctacaaccatctat
ggtctgcaacctggcactgaatacactgtgaaagtcatcgcagtgcatgatgacacggcc
agcacaccactggtcgggacacaagctacagccatctccccccccaccaacctccagttc
tcccaggttggccctacctcattcaccatgcgctgggctgtgccgggtcaggaaaaccga
ctaactggcctaacgggcctcacaggctaccgtgtggtggtgaacccaaagaacaagagc
ggtcctaccaaggagatcaacttggccccagacgccacacaggcacacatctctggactc
atggttgcaactgcctatgaagtccatgtttatgctttgaaaaactctctgaccagcagg
ccagtccaaggagaggtcactactctggagaatatcagcccccctcgtcgtgttcgtatc
tctgacgttaatgactcttccatcaccctgacctggcgctccaagacagaacccatctct
ggcttcctggttgaggccacacccaccacctctttaggctacacacccattcaaaagacc
attggctctgactcacgctcattcactattacaggtctggagccaggcaccaattacaag
atcaacatctatacactgaaaggaaacggacgcagtgcacctctcacactcactgccacc
acagccaaaccagtggtcatgccgcccaccaatatccgcttcacctccctgaaccctaac
agcatctcattcacctgggagccatcacgcagtccaggggttactgggtattatgtcacc
tatgaggaagccgggggtttgcctagagaggttacccccagaccccatgcaggccagagc
tacaccattattaatggtctgaaaccaggaacagagtatgtcattaagattgtcgccctg
cagaatgctttaagaagcacacctcttgtaggcaaagccagaacacagccagctccagat
catcacctattggttcccgagctgccacagcttcctgttcctcatcggccgaccactgac
atcctggatgttccagagtccttcaatgacaagatttttgacaccaaccatgttcacttg
tctggcactagtggccaaaaccaaccaggccagcagggccagcacatctataccgagtac
cagagcctgggccctaataatggactgcatggccccttcagtggacccagagaaggccag
agaccaactctcagagaacctctgatctatattcctgttgcaggccctgatggaaacaga
gtacccttggtcaaggtgagcgagggtcccctgccaggtcttgcatttggtttccctgac
aacgaaacagaattgccccacgaagcacagacaatcacgaccatctcctggtctggcgtt
cctcatacttcagagtatgaggtgtcctgtaatcctattacacacctggaggaaaggggc
tttcagatgcgtcttcctggcacctccaacagtgccacactgataggattgacatccggg
gcatcctataacgttgttgtagaggccatgagggacgggtctaaagagaaggttttggag
gaagttgtaaccgttggcaacgctgttccaggtgacatccccatttccaccaaccgggat
gtgtgttatgacatattcacacagacctaccacgaggtgggctcagagtgggagcgcatg
tctgagacgggctttaagctgtggtgtcgctgcctggggctgggcagtggccattttagg
tgtgattcatccaagtggtgtcatgacaacaataacaactaccgcgtcggcgagaagtgg
gatcgccaggctgaaaacggtcacatgatgagctgcacctgcctgggaaatggcaaggga
gaattcaaatgtgaaccccatgagtcgacttgttatgacgatggtaaaatgtaccaggtt
ggaaaccagtggcagaaggaatacctgggcgccatctgtacctgtacctgctatggagga
caacagggctggcgttgtgagaactgccgaaggccaggaggacagactgatgtggacgct
agcctccttcaaccggttcattctgataccttcgaccgatacagagaaaacgctctacgc
aaactgaacatccagtgtccanttgaatgtttgaggccggagctgcttgcagatgctaac
aaccccttagattag
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integrated database retrieval system
