Etheostoma spectabile (orangethroat darter): 116698671
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Entry
116698671 CDS
T08457
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116698671 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116698671 (exosc4)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116698671 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
116698671 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116698671
NCBI-ProteinID:
XP_032386612
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Position
12:complement(9355597..9358237)
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AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEIRG
ARSRIRHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALLQMDARLHQDHLETLIEAAMTACKGVSKVLDEVVRQHLQEVS
VLSGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctggagctgctgtctgaccagggataccgtttggatggaagaaaagccacc
gagctgcggaaggttcaggcccgaatgggtgtgttcgctcaggcggacggctctgcgtat
ttagagcagggaaacacgaaagctctggctgtggtttacggtccgcatgaaatccgaggt
gcacgcagccgaattcgtcatgatcgagctgttatcaactgtcagtacagcatggccacg
ttcagcacagctgagaggaagaggaggccacacggagaccgcaagtcaactgagatgagc
ctccacctcaagcagacgtttgaagctgctgtgatgacccagctctacccacgctctcaa
atagacatctatgtcaagattctgcagtcagatggaggtaactacagcgtgtgcgtaaat
gctgccactctggcggtgattgacgccggcatccccatgcgagactacgtgtgtgcctgc
acggtcgggtttgtggatgagacgcccctcgctgacctttgctatgcggaggaaagtgga
ggagtgagctctctggccttagcactgctgccccggggcggacagatcgctctgctgcag
atggacgccaggctacatcaggatcacttagagactctgatcgaagccgccatgacagct
tgtaaaggggtgagcaaggtgctggatgaagtggtgcgacaacatctccaagaagtttct
gtgctctctggagaatga
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