Etheostoma spectabile (orangethroat darter): 116698753
Help
Entry
116698753 CDS
T08457
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116698753 (pcdh8)
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Protocadherins
116698753 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
116698753
NCBI-ProteinID:
XP_032386767
LinkDB
All DBs
Position
12:complement(17534034..17538371)
Genome browser
AA seq
1011 aa
AA seq
DB search
MGEIGWNGLLVLVFVSWASLASVTQGKTVKYQTFEEDAPGTVIGNLAKDISSTASSSGGS
RTNFRMMKQFNSSFIRLRESDGQLTIGERIDRERTCKHMLHCLIAFDVVSFSKEQFKLIH
VEVEVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGANYIQSYQISVNSHF
SIDVLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINVKVKDYNDN
SPVFDRNSFSVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGNQVPAEIRQLFRVDRK
TGRLTIESPIDFESKNTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSI
TAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSP
LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGA
YITTVVARDMDMGSNGKVTYKLADTYFMGSPISTFVSLDPASGSLYALRGFNYEMMKQLE
LRITASDGGSPPLSGSTNVYVRIVDQNDNTPVITQPPLNNGSAEVLLPRDAPSGYVITRV
EARDADEGVNAELSYGLATGEPSVFSVNKATGEIYLNQVLSHDVDETLSVTVTVSDNGRP
ALTSTATLHFLIIAGSPPSDRTVYQSGSGDEVHAQWDLSVVIIVVLAGSCTLLLLAIILI
ATTCNRHKRDKSGEDSDSYGEKGTLERGRNHVGDNPLLPLHGAGGGAGFDGHSYSSQPGG
FTSAHPGGSEMCSASEDGSEVPCVYDSDSNSKPRGNKHEGYSTLPGYGNAKEAVRPITIW
KGNSYTTISARDPAFSGKDSGKGDSDFNDSDSDVSGDTGLKKDGAVVPPMGGQNALWACT
SECKVLGHSDRCWSPSAVRANAAPSPAPTISSFSSLSKTGSLPRDPHRKDNCYQAHIPKT
VGLQSVYEKVLHREYDYVLVTPPRPVRVPEISDINIPVYTPTPTHCPNNDV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaatagggtggaacgggctgttggtgctagtattcgtctcttgggcaagcctg
gcttctgtcacacaaggaaagacggtgaaatatcagacattcgaggaagacgcaccaggg
acagtgattggaaacttggccaaggacatctcctccactgcctcttcctcggggggctcc
aggacaaatttcaggatgatgaaacagttcaactcctctttcatccggctgagggagagc
gacgggcagctgaccatcggagagaggatagacagggagcggacctgcaaacacatgctg
cactgcctcatcgcttttgacgtggtcagtttctccaaagagcagttcaaactcatccac
gtcgaggtggaggtcaaggacatcaatgacaactcccccgagttcccccggaaagagtcg
agtctggagatctccgagaacacagcggtgggtacgcggataccgctagactttgccgtg
gatgaggatgttggggcgaactacatccaaagctaccagatctccgtcaacagccacttt
tcaatcgacgtgctcagcagggccgacggggttaaatatgcggagctggtgctcatgaag
gagctggaccgggagacgcaggcttcttacgcgctggagctggtcgctatggacggtggc
aacccgtcccgcaccggaacaacgcgcatcaacgtcaaggtgaaagactataacgacaac
agcccggtgttcgacaggaacagcttctccgtggacctgcccgaggacgcaccggtgggt
tttctcttgctggacctgaacgcggaggatccagacgaggggctgaacggtgaagtggtg
tacgggttcggtaaccaggtgcccgcagaaatacggcaactgttcagagtggacagaaag
accggacggctcaccatcgagagcccgattgactttgaaagtaagaacacgtacgagttt
gacgttcaggcaaccgacctgggtccgaacccgagcccggccatctgcaaaattgtagtg
caggtgcaggacgtaaacgacaacgcaccggagatctccatcactcctatgacgtccata
acggcggggatagcgtacattaccgaggcggcggccagagagagcttcgtggctctggtc
agcacctcggacagagactccggcgctaacggccaggtgcactgcacgctctacggacac
gatcacttcagactgcagcaggcgtacgaggacagcttcatgattgtgagtaccagcccg
ttagaccgggagaaaatccccgaatataacctcacagtagtggcggaggatctgggctcc
cctcccttcaggaccatcactcagtacacaatcagactgacagatgagaacgacaacgct
ccggtgttcagtaaaccggtgtatgaagtggccgtggtggagaacaacgcacctggcgcg
tacatcaccactgtagtggcgcgggacatggacatggggtcaaacgggaaggtcacctat
aaactggcagacacatatttcatgggctcccccatttccaccttcgtgtcgctggacccc
gccagcgggtcgctttacgcgctccggggcttcaactatgagatgatgaaacagctggag
ctccgtatcacggccagcgacggcggctccccgcctctgtccggcagcactaacgtctat
gtgaggatagtggaccagaatgataacacaccagtcatcactcagccgcctctcaataac
ggctccgctgaagtcctcctgccccgggacgcaccgagcggctacgtcatcacccgggta
gaggcacgggatgcggatgagggcgtgaacgcagagctgtcctacgggctggccaccggt
gaaccctccgtgttctctgttaacaaagccaccggggagatctacctcaaccaggtgctc
agccatgacgtggacgaaactctgagcgtgaccgtgacggtgagcgacaacgggaggccc
gcgctcacctccaccgccacgctccacttcctcatcatcgcgggctccccgccgagcgac
aggacagtgtaccagtcaggcagcggggacgaggtgcacgcgcagtgggacctgtccgtg
gtgattatcgttgtcctcgcggggagctgcacgctcctgctgctcgccatcatcctcatc
gccaccacctgcaaccggcacaagagggacaaaagcggagaagacagcgactcgtacggg
gaaaagggcacgctcgagcggggcaggaaccacgtgggggacaacccgcttctgccacta
cacggggccggtggaggagcgggctttgacggacactcctacagcagccagcccggtggg
ttcacgtcggctcaccccgggggcagcgaaatgtgctcggcctcagaggacggcagcgaa
gtgccctgcgtgtatgactcagacagcaacagcaagcctagagggaataaacacgagggc
tactccactctgcctggctatgggaacgccaaagaggctgtgaggcccatcactatctgg
aaggggaactcttacaccaccatctctgccagggacccggccttcagtggcaaagacagt
ggcaagggagacagtgacttcaacgacagtgacagtgatgtcagtggggacactggcctg
aagaaagatggggcagtggttcctcccatgggtggccaaaatgctctgtgggcttgcacc
agtgaatgtaaggtcctgggtcactcagatcgctgctggagcccctcagcagtaagagcc
aacgcagcgccctctccagcccccaccatctcctctttcagcagcctctccaagacaggc
tccctgccccgggacccccaccgcaaggacaactgctaccaggcgcacatccccaaaacc
gtgggtctgcagagcgtgtacgagaaggtgctgcacagagagtacgactacgttctggtc
accccacccaggcctgtgcgggtgccagagatcagtgatataaacatccctgtgtatacc
cccaccccaacacactgtcccaacaatgacgtctaa
DBGET
integrated database retrieval system
