Etheostoma spectabile (orangethroat darter): 116698826
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Entry
116698826 CDS
T08457
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116698826
09122 Translation
03013 Nucleocytoplasmic transport
116698826
03015 mRNA surveillance pathway
116698826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116698826
03041 Spliceosome [BR:
esp03041
]
116698826
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116698826
Spliceosome [BR:
esp03041
]
Complex C
Other components
EJC/TREX
116698826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
116698826
NCBI-ProteinID:
XP_032386906
LinkDB
All DBs
Position
12:complement(18055288..18074502)
Genome browser
AA seq
1757 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYDTSEPEDHTEVNNSTSCP
PQVQDATPALAEQHKPPGPSGGEGLFGAVNEGEGNRNQEADMSGPPASGSVAMHVPGGER
RPEKGSASNKIAADSDDDDSEDGEEDGDDDDWESGARRRGHKEPAKVPTTRERSGASCQP
PQQHMPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARRSSSTSSSGSSSS
GSRSSSPEPQRSGHAERKPGPLTLLARKMASEGAFSGAGWHRGAGEGDRQDSSTPATSFP
GRGHPEGLVSAITHTANTAGHVSFPMISGTHQGITGAQSAHIQVPVSLLKATAAEERDRE
RDSQILREKALELQRLQMQRKLEQEHEKVLEKERIERQQALEREEREKALQRERELALER
ERQEMELALAKEREEQALAQERALELERQKELERQRALEHERLQREKEEREKREREEMVR
VMELERAKALEQERKERERALEQERLQRELALEAERKEKERIEREKALEQERLERERLER
EKALEKERLEREKALEKERLEREKALEKERLEVERALVQERLEKEKAIEREKALEQERIE
REKALEQKRIEKEKALEQERIEREKALEQERIEREKALEQERIEREKVLEQERIEREKVL
EREKERLERERALEQRLELERKEKERIERDKALEQERIEREKALHEREEKERLEREAALE
QVRMEKERAEKERKEKLEREKALEQEKEKMERALEQERLEKEKAMQKEKEEQERALEQEK
ERARGTEKDRESHLPPSKHGREIGLTPLPTPPPLSTGPGRKSSTEAGEQEDVHTPVSLCE
AAESGAPMPATLLLPQSSFKKFRFIRDSPIQLQSSSPSMVIKRPRNFSDTAHPRASHVSS
LPSSAEQEDPQMRTKQEVVARAPGSEGAQPEKETTVNTSLVLSPKKEGATSLVLEDKDKA
DTEKLEQAAKESTKKAKEVDESKGPTNPVATAQRRGRATNKEEKLVRQRSSSSNDSSSSE
SDSRSSSSRSSGSSTSSQEKTCSTSRIRRDGKPERDSSPQHRVTQEAQAQAEGIKETPKF
SPGKREMPVEKSNTTADGDSHTKKPFIEAPTREASQRKKKDNEREEKTDKQRQLKETAMA
EPEKLLETSEETPKAFSARKISISSSKLSPGTGSAEGEQDSGAAAGRKRRWGSSTAVTAK
KPSISITTDSLKSLIPDIRPCLGQEAVVDLHPEEAVLSGAEDEERECSDQDLQIRRTVTQ
VVHSESQENGEKETKRSRHEELEEDEPQVDTEITRTHEEKMDTSFPGAVETQSPSHTSHD
VETNTVTPSDTLIRRSISQQKTGVSITIDDPVRTARQPSPPRGKVSNIVHISNLVRPFTL
GQLKELLGRTGTLVEEGFWIDKIKSHCYVTYCSSDEAVATRAALHGVKWPQSNPKVLNVD
FCQQDELDFQKGLGVAGKPVAEERGPGSGRGRTSALPSLLPERDQWAEREREMERREKAR
AEREWDRDKVREFGKPGEEKEEGPRRSRSRERRRKERGKSKEKKTEKKEKMAEDPPAKLL
DDLFRKTKAAPCIYWLPLTEEQFVQREAAKAERMKEREKRRKEQDEEEEKKREEERKERV
KAGGGPTGERSEGEKEKEKDRERDRDRDRGRDRERERERVRERENDKRRDGYRRPEGRAA
GVGRRSRSRSDPRERRR
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctggaagacgttacgctggacgggagaccgctacagtcccttcgagtagcg
gatttaaaagctgctcttgaggagagaggactctcgaaaagcggccagaagaatgcttta
ataaaaagactcaaaggggctctcatgctggagaatctgcagaggacttccaccgctcac
attggactgcagccaaactcacagattggtgaggaaatgagccagaacagcttcatcaag
cagtatctggctaaacaacaggagctcctgaggcagcggctggagagagaagctcgtgaa
gcatatgacacaagtgagccagaggaccacacagaagttaataacagtacatcatgccct
cctcaagtccaggatgccacaccagcattggctgagcagcacaagccacctggcccctct
ggtggagagggattgtttggtgcagtgaatgagggagagggtaacaggaaccaggaggct
gacatgtccggtcctcctgcttctggctctgtggccatgcatgttcctggtggtgagcgc
cggccagagaagggatctgcctccaacaaaattgctgctgacagcgacgatgacgatagt
gaggatggcgaggaggatggtgacgatgatgactgggaaagcggtgctcgaaggagaggc
cacaaagagccagcaaaagtgcccacgactagagagaggtctggtgcatcctgtcaaccc
ccacagcagcacatgccttcccttttgtctcctcaactccgccagccgacacctcctccc
tccccacctccagaattatcattccccttgcctgacacccctaaacagagcccccctagt
ccagatgtagccccagctaggcgctcatccagtacctctagctctggttcatccagcagc
ggcagccgcagtagcagcccagagccacagaggagtggacatgctgagcgcaagccaggc
ccgctgacccttctggcacgtaaaatggcatcagaaggtgctttttcgggagcaggttgg
caccgtggcgctggggaaggtgataggcaggacagcagtactccggctacatcatttcct
ggcagaggtcatccagagggtctggtatctgccatcactcacacagccaatactgcaggc
catgtgtcatttcccatgatttcaggcactcaccagggtatcacaggagcacagtcggcc
catattcaagtacctgtgagtttgctcaaagccacagctgcagaagagagggacagagag
agggactctcagatattaagagaaaaggcccttgagctgcaaaggctacagatgcagagg
aaacttgagcaagaacatgaaaaagttctggagaaagagagaattgaacgtcagcaggcc
ttagaaagagaagaacgagaaaaggctttgcagcgggagagagaacttgctctagaacga
gagaggcaggagatggaactagctttggctaaagagagggaagagcaagccttagcacaa
gagagggccttggagctggagaggcagaaggagcttgaaagacagagggccctggagcat
gaacgtctgcagagagaaaaggaggagagggagaagcgagagagagaagaaatggtacga
gtaatggagctagaaagagctaaggctttggagcaggaaaggaaggagagagaaagagct
cttgagcaagagaggctacagagggaattagctctggaggctgagagaaaggagaaggag
aggattgagagagaaaaggctttggagcaggaaaggttggaaagggaaaggctagagagg
gagaaagccttagagaaagagagactagagagggagaaagccttagagaaagagagacta
gagagggagaaagccttagagaaagagagactagaagtggaaagagccctggtacaagag
cgactagagaaagaaaaagccattgagcgagagaaagccttggagcaagagcgaattgaa
agagagaaagccttagagcaaaagcgaattgagaaagagaaagccttagagcaagagaga
attgaaagagagaaagccttagagcaagagagaattgaaagagagaaagccttagagcaa
gagagaattgagagagagaaagtcttagagcaagagagaattgagagagagaaagtctta
gagcgagagaaagaaaggttggagcgggagagagccttggaacagaggttagagcttgag
aggaaggaaaaggagagaattgagagagacaaagcattggagcaagaaaggatagaaagg
gaaaaggccttacacgagagggaggaaaaagagagattggagagagaggcagctctggaa
caggtgaggatggagaaggaaagagccgaaaaggagaggaaagagaagctggagagagag
aaagctttagagcaggagaaggaaaagatggagagggcacttgaacaagaaaggttagag
aaggagaaagcaatgcagaaagaaaaggaggagcaggagagggccctggaacaggagaaa
gagagagctagggggactgaaaaggatagggagagtcacctccctccttccaaacatggc
cgtgagattggtcttacccccctgcccactcctcctcccctttccacaggaccaggtaga
aagtcatcgacagaggcaggagagcaagaagatgtccatactccagtgtccctgtgtgaa
gcagcagaatccggtgcacccatgccagcaacacttctgttgcctcagtcctcattcaag
aaattccggtttatacgggactccccaattcaactccaatcttcctccccttccatggtc
ataaaacggccccgtaacttttctgataccgcccatcctcgggcctcacatgtttcctcc
ctcccatcctccgctgaacaggaagatccacagatgcggacaaaacaagaggttgttgcc
agggcgccaggatctgaaggggcccagcctgagaaggagaccactgttaacacctcactg
gtcctaagtcccaaaaaagaaggggccaccagcctagtattggaggacaaagataaagca
gatactgagaagttggaacaggctgccaaggagtccaccaaaaaagcaaaagaagtggat
gaaagtaagggtcctacaaacccagtggctactgctcagcggaggggaagagctacaaac
aaggaagaaaaactagtaagacaaagatcatcatcatctaatgattcctcgtcgtcagaa
tcggactcgaggtcctcgtcttctcggtcctctggctcatccacatcctctcaagagaag
acctgctccacttcaagaattagaagggatggtaaacctgaaagagattcctcaccacag
cacagggtgacacaagaggctcaggctcaggctgagggtataaaggaaacaccaaaattc
tcccctggcaaaagagagatgcctgtagagaagagtaacacaactgctgatggagacagt
cacaccaagaaaccattcattgaagcaccaaccagagaggcgtcccaaaggaaaaaaaag
gacaacgagagagaggagaaaacggacaaacaaagacagttgaaggagactgccatggca
gagccggagaagcttctagagaccagtgaggagacaccaaaggccttctctgctcgtaag
atctctattagcagcagtaaattgtctccaggtactggcagtgcagagggtgagcaagac
tctggggctgcagccggtcgcaagaggaggtggggctccagcacagctgtcactgccaag
aaaccttccatcagcatcaccacagattcacttaagtctctgatcccagacattcgcccg
tgtctcgggcaggaggcagtagtggacctgcacccagaggaagctgtcctctctggtgct
gaggatgaagagagggagtgctctgaccaggatcttcagatccgtcggactgtcacacag
gtggtgcactcagagagccaggagaatggagagaaagagacaaagaggagcagacatgag
gagctggaggaggatgaaccacaggtagacacagagatcacaaggacccacgaagagaag
atggacacctcatttcctggagctgtggaaacccagtctccatcacataccagccatgat
gtagaaactaacactgtgacccccagcgacaccctcattcgccgctccatcagccagcaa
aaaacgggtgtttccatcacaatcgatgaccctgttcgcacagcccggcagccctcgcca
cctcgcggcaaggtctccaacattgttcacatcagcaacctggtgaggccgttcactctg
gggcagctaaaggaactgctcggcagaacaggcaccctggtggaggagggcttctggatt
gacaaaatcaagtctcactgctatgtcacttactgtagctcagatgaggcagttgctaca
cgggcagctcttcatggagtgaaatggcctcagagcaacccaaaagtccttaacgtagac
ttctgccagcaggatgagctggacttccaaaaaggcttgggcgtagctggcaaacccgta
gcagaggaacgggggcctggttctggccgtggtcgaacatcggccttgccctctctcctc
cctgagcgagaccagtgggccgagcgtgagcgtgagatggagcgccgagagaaggctaga
gcagagcgggagtgggatcgcgacaaggtccgagagtttggaaaacctggtgaagagaag
gaggaaggtccacgtaggtcacgctccagagagaggcgccggaaggagaggggaaagagc
aaggagaagaagactgagaagaaggagaaaatggctgaggacccccctgcaaagctgctt
gatgatcttttccgcaaaactaaagcagctccttgcatatactggcttccacttacagag
gaacagtttgtccaacgggaagctgccaaagcagaacggatgaaggagcgtgagaaacgg
aggaaggagcaagatgaagaggaggagaaaaaaagggaagaggagcgcaaggagagggtg
aaagctggaggcggcccaactggagaacgaagtgagggtgagaaggaaaaagaaaaggac
agagagagggacagagacagagaccgaggtagagacagggagagggagagggagagggtg
agggagagggagaatgacaaacgcagggatggctaccgtaggccagagggccgtgcagca
ggcgtgggcagacgctcacgcagccgcagcgacccacgagaaaggcgacgttaa
DBGET
integrated database retrieval system
