Etheostoma spectabile (orangethroat darter): 116698832
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Entry
116698832 CDS
T08457
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116698832
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116698832
Membrane trafficking [BR:
esp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
116698832
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116698832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Ribosomal_60s
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
116698832
NCBI-ProteinID:
XP_032386923
LinkDB
All DBs
Position
12:1978924..1988480
Genome browser
AA seq
941 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAVALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMSEKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELGLQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGNLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEHYLRESCLGTSRPAKDYPLVTLNEDRNILEEA
QGYEPKGTFIPAVPKQTQEGGESVAAAPVAAAVAAVSLQPEPAAATAVDKEEEEEEEEDI
PEYSQSQKDKSLDELDVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcgcaggctgacagccaggtcagaccgagtgaagagt
gtggaccttcacccaactgagccatggatgctggccagtctgtacaacggcagtgtctgt
gtgtggaaccacgaaacacagactctggtcaagaccttcgaagtgtgtgacctccctgtc
agagcctctaagtttgtggcaaggaagaactgggtcattacaggagcggatgacatgcag
atccgagtgttcaactacaacactttggagcgtgtccatatgtttgaggcccactctgac
tacattcgttgcatcgctgtccatccgacccagccctatatcctcaccagcagtgatgac
atgttgatcaagctatgggactgggacaagaagtggtcgtgcagccaggtgtttgagggt
cacactcactatgtcatgcagattgttatcaaccccaaggacaacaaccagtttgccagt
gcctccctggacaggacaattaaggtttggcagctaggctcttcatctcccaatttcact
ttggagggtcacgagaaaggggtcaattgtattgactactacagtggaggagacaagccc
tacctcatttcaggggctgatgaccgccaagtaaagatctgggactaccagaacaaaacc
tgtgttcagactctggagggccacgcccagaatgtctcttgcgtcagcttccaccccgag
ctgcccatcatcatcactggatcagaggacggtacggtgcggatctggcactcgagcact
taccgcctggagagcactctcaactatggcatggagagagtgtggtgtgtgtgtggcctc
aggggctccaacaatgtggcgctgggctacgatgaaggcagtatcattatcaaggtgggt
cgggaggagccggcaatgtccatggacacaaacggaaaaatcatctgggctaaacacagt
gaaatacagcaagccaacctgaaggccatgggtgacaccgagatcaaggatggcgagcgg
cttccgttagctgtcaaagatatgggtagctgtgagatttacccccaaaccatccagcat
aaccctaatggaaggtttgttgtggtgtgtggagatggagagtatatcatctatactgcc
gtggctttgaggaacaagagcttcggctcagcgcaggagtttgcctgggcacatgactca
tcggaatatgccatccgagaaagcaacagtattgtcaaaatcttcaaaaatttcaaagaa
aagaaatcttttaaacctgactttggagctgaagggatctatggaggcttcttgctcggg
gtcaggtcagtgaatggactggcattttatgactgggagaacacagagctggtgcgccgc
atcgagatccagcccaaacacatcttctggtcagactctggtgaactggtctgcatcgct
acagaggagtccttcttcattctgcgttatatgtcagagaaagtagccgcttctcaagag
aacaatgaaggggtgaccgaggatggtattgaagatgcctttgaggtccagggagagatc
caggagattgtgaagactgggctctgggtaggagactgcttcatctacaccagctctgtg
aacagactcaactactatgtaggaggagagattgtcaccattgctcacctggacagaacc
atgtacctgctgggttacataccaaaagatgaccgtctgtacctgggagacaaggagctc
aacattgtcagctactccctgctggtctccgtcctggagtaccagactgctgtaatgagg
agggactttggaatggctgacaaggtgcttcccacaattcctaaagagcagcggaccagg
gtggcccatttcctggagaaacagggcttcaagcagcaggcgctggctgtgtccacagac
ccggaacaccggtttgagctggggttgcagctgggagagttgaagatagcttaccagctg
gctgtggaagcagagtcagagcagaagtggaagcagttagcggagctggctatcagtaag
tgccaattcagccttgcccaggagtgcctgcaccacgcccaggattatggtggcctgctg
ctcctggccacagcctccggtaacgccactatggtgggcaagctggctgagggggcagaa
agggacggcaagaacaatgtggccttcatgacctacttcctgcagggaaatctggatcag
tgtttggagcttctgatcaggacaaacagactgcctgaagctgccttcctggctcgcacc
tacctgcccagtcaggtctcccgtgtggtcaaattgtggagggagagcctggctaaagtc
aaccagaaggcggccgagtctctagcagaccccacagagtatgagaatctgttccccggg
ctgaaggaagcctttgcagctgagcattaccttcgagagtcctgcttgggcacctctagg
cctgccaaagattatcctctcgtcacgctcaacgaagacaggaatattcttgaggaggct
cagggatacgagcccaaagggaccttcattcctgctgtccccaagcagacacaggagggt
ggggagtcggtggcagcagcccccgtcgctgcagcagtagcagctgtgtccttacagcct
gaacctgctgctgctacagcagtggacaaagaggaggaggaggaggaggaggaagacatt
ccagagtactcacagtcacagaaagacaagagtctggatgagctggatgtggacctggac
aacatggagctggatgacatcgacaccacagacgttaacctcgatgatgactttctagac
gactga
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