Etheostoma spectabile (orangethroat darter): 116698833
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Entry
116698833 CDS
T08457
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03271
Virion - Rotavirus
esp04145
Phagocytosis
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04514
Cell adhesion molecule (CAM) interaction
esp04517
IgSF CAM signaling
esp04518
Integrin signaling
esp04530
Tight junction
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
esp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
116698833
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116698833
04514 Cell adhesion molecule (CAM) interaction
116698833
04517 IgSF CAM signaling
116698833
04518 Integrin signaling
116698833
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
116698833
09144 Cellular community - eukaryotes
04510 Focal adhesion
116698833
04530 Tight junction
116698833
09142 Cell motility
04820 Cytoskeleton in muscle cells
116698833
04810 Regulation of actin cytoskeleton
116698833
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116698833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116698833
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116698833
04515 Cell adhesion molecules [BR:
esp04515
]
116698833
04090 CD molecules [BR:
esp04090
]
116698833
Membrane trafficking [BR:
esp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116698833
Exosome [BR:
esp04147
]
Exosomal proteins
Proteins found in most exosomes
116698833
Cell adhesion molecules [BR:
esp04515
]
Integrins
Integrin beta subunits
116698833
CD molecules [BR:
esp04090
]
Proteins
116698833
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
116698833
NCBI-ProteinID:
XP_032386925
LinkDB
All DBs
Position
12:<1871293..1889351
Genome browser
AA seq
844 aa
AA seq
DB search
MAASGPQHGGTAEARVSVSSSQQLLREILKKKTFLHHLVQQMALWLLLVATLSSVLCGSW
AQQEGSVCIKANAQSCGECIQVAETCGWCADENFLTVGESKSARCDDLESLKKRNCAVTK
IENPRGSVSIDKNNPVTNRKKDGSEKLKPEQITQIQPQKLTLTLRSGEPQTFELKFKRAE
DYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMQEITSDFRIGFGSFVEKTVMPYISTT
PAKLINPCTGNQNCTSPFSYKNVLKLTDKGDEFNRLVSQQQISGNLDSPEGGFDAIMQVA
VCENQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGRCHLENNVYTMSHYYDYPSI
AHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSSNSSNVIKLIIDAYNSLS
SEVILENGRLPEGVSITYKSICKNGVEGTGENGRKCSNISIGDEVSFKVSIQSEKCPSHG
KTEVIKIKPLGFTEEVEIVLNFICDCQCATKGEPNSEKCYEGNGTFECGACKCNEGRIGR
LCECSKDEVRTEDLDANCRKDNGTDICSNNGDCVCGTCECKKRENPAEIYSGKYCECDNF
NCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLETASCLAKNGQICNGRGTCECGIC
KCTNPKFQGPTCEVCPTCPGVCAEHKDCVQCRAFEAGEKKDTCERDCSYFHLIKVKDRNN
LPQPTDQSFPLTHCKERDANDCWFYYTYAIRNDTKEVYVMELLDCPAGPDIIPIVAGVVA
GIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQGNPIYKSPINQFQNPSYGNK
GASL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagtggaccacaacatggaggcacagcggaggctcgagtttcagtcagctct
tctcagcagctgttgagggaaatccttaaaaaaaaaacatttttacatcacttagttcaa
cagatggctctgtggttacttttagtagcaacgttatcatcggtcctctgtggcagctgg
gcacagcaagagggaagcgtatgcatcaaggcaaatgcacagtcatgtggggaatgcatc
caggtggccgagacgtgtggctggtgtgcagatgaaaacttcctcacagtgggtgagtcc
aagtcggcccgctgtgatgatctggagtccctgaagaagaggaattgtgcagtgaccaaa
attgagaacccacgcggcagcgtcagtatcgacaagaacaaccccgtcaccaaccgcaag
aaggacgggtctgagaaactgaagcctgagcagatcacccagatccagccccagaaactc
accctgacactcagatctggtgagccccagacttttgagctgaagttcaagcgtgcagag
gactaccccatcgacctgtattaccttatggacctctcattctccatgaaagatgatttg
gaaaacgtcaagaaccttggcacagacctcatgagggaaatgcaggagattacctcagac
ttcaggatcggttttggctcctttgtggagaagacggtcatgccttacatcagcaccacg
ccagctaagctcatcaatccgtgcactgggaaccagaactgcaccagtcccttcagctat
aagaacgtcctgaagctgacagacaagggggacgagttcaatcgcttggtcagtcagcag
cagatctccgggaacctggactctccagagggcggctttgatgccatcatgcaggtggcc
gtctgtgagaaccaaatcggctggaggaacgtgactcgtctgctggtgttttccactgat
gctggtttccactttgctggagacggcaaactgggtggcatcgtgctgcccaacgatggg
aggtgtcacctggagaacaacgtgtacaccatgagccactactacgactacccctccatc
gcccatttggttcagaaactgagtgatcacaacatccagaccatctttgccgtcactgaa
gagttccagcctgtttacaaggagctgaaaaatctcattcctaaatcagctgttggtacg
ctgtcctccaactccagcaacgtgatcaaactcattattgatgcctacaattctttgtca
tctgaggtcattctggagaacggcaggctgccagagggagtctccatcacctacaagtcc
atctgtaagaacggtgtggagggaacgggggagaacggcaggaagtgctccaacatctcc
attggagacgaggtgtctttcaaggtttccattcaatccgagaagtgtccgtcgcatggc
aagactgaagtcattaaaatcaaaccactgggcttcaccgaggaggtggagatagttctg
aacttcatctgcgactgtcaatgcgcaacaaaaggagagcccaacagcgagaagtgctac
gaaggcaacgggaccttcgagtgcggagcctgcaagtgtaatgaagggcgtatcgggcgt
ctttgcgagtgcagcaaagatgaagtgcggacagaggacttggatgccaactgccgcaaa
gacaacggtacagatatctgcagcaacaacggcgactgcgtctgtggcacctgtgaatgc
aagaagcgggagaaccctgcagagatctacagtggcaagtactgcgagtgtgacaacttc
aactgtgaccgctccaacaacaagctctgcggagggcatgggcgttgtgagtgcaggaag
tgcatctgtgatgctaactacacaggcagtgcctgcgactgctccctggagacggccagc
tgcctcgccaagaacgggcagatctgtaacggccgcggtacctgcgagtgtggcatctgc
aaatgtaccaaccccaaatttcagggtccaacctgcgaggtctgtcccacctgccctggc
gtctgcgctgagcacaaagactgtgtgcagtgccgagcgttcgaggccggtgagaagaag
gatacgtgcgagcgggactgcagctactttcatctgatcaaagtaaaggatcgcaacaac
ctgccgcagcctacagaccagagcttccccctgactcactgcaaagagcgagacgccaac
gactgctggttctactacacctacgccatccggaacgacaccaaggaggtctacgtgatg
gagctactggattgcccggcgggacctgacatcatccccatcgtggcgggcgtggtagca
ggcatcgtgctgatcggcctcgccctgctgctcatctggaagctgctcatgatcatccac
gaccgccgcgagttcgccaagtttgagaaggagaagatgaacgccaagtgggacacgcaa
gggaaccccatttacaagagtcctattaaccagttccagaatcccagctacgggaataaa
ggcgcttctctttag
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