Etheostoma spectabile (orangethroat darter): 116698945
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Entry
116698945 CDS
T08457
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116698945
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116698945
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
DUF6564
Motif
Other DBs
NCBI-GeneID:
116698945
NCBI-ProteinID:
XP_032387112
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All DBs
Position
12:9086042..9107586
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AA seq
461 aa
AA seq
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MNVEEDSGMSVSCGNGKLRQWLIDQIDSRVYPGLIWENEEKSIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKYKEGVDKPDPPTWKTRLRCALNKSNDFDELVERSQLDISDPYKVYR
IIPEAAKRGMKMSVEETPSPANALGYIPPFTSMHNQVSGYMVSPERRDWRDYSPPEQQPL
PPPHHHGSHAELQYGQCHYPSPFSRAWPGSHTENGFQLSFHTYFSESQPPVYSIDQNNAI
TDFSLHVSLYYREALVKEVTTTSPEGCRITSSSSSSPSSSSSSSPCPEDKLHSGEEIILF
PFPYPESQRQGAEMLPNVLEKGVLLWMTPDGLYAKRLCQGRVYWEGPLAPFMDKPNKLEK
EQPCKLFDTQQFLIELQDFVHNGRHLPRHQVVLCFGDEYPDPQRPRKMITAQVEPVFARK
LVYYYQQSNGHYMRAFDHTQEQNTSPTNDYPSQRSLQHIQE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagaagaggacagtggcatgtcagtcagctgtggcaacggtaaactgagacag
tggctgatcgatcagattgacagcagggtatatcccggcctgatttgggaaaatgaggaa
aaaagcatctttaggattccgtggaaacatgcaggaaaacaagactataacagagacgag
gatgctgcgctcttcaaggcgtgggcattgtttaagggaaaatataaggaaggagtcgat
aagccagatccccccacatggaaaacaagactacgctgtgctcttaataaaagcaatgac
tttgatgagttagtggaaagaagccaactagacatctcagacccctataaagtctacaga
atcattccagaagcagccaaaagaggaatgaaaatgagtgtagaggagacaccatcacct
gcaaacgcccttggctatattcctccatttacgtcgatgcacaaccaggtatccggctat
atggtttctccggagagaagggactggagggattactcacccccagaacaacaacctctt
cctcctccacatcaccatgggtcacatgcagagctgcagtatggtcagtgccactaccca
tcaccgttcagtcgggcttggccggggtcacacacagaaaatggttttcagctctccttc
cacacctacttttcagagtcccaaccgcccgtgtattcaattgaccaaaacaatgccata
acagatttcagcctgcatgtgtccctatactacagagaggctttggtgaaggaggttacc
accaccagtccagaaggttgtcggatcacctcttcttcctcctcctctccatcctcttcc
tcctcttcctccccatgccccgaggacaagcttcacagcggggaagaaatcattcttttt
ccattcccgtaccctgagtctcagagacagggtgctgagatgcttcctaatgtactggag
aagggggtgcttctgtggatgacacctgacgggttgtacgctaagcgcctctgccaagga
cgagtgtactgggaaggacctctggctccatttatggataaacccaacaagctggagaag
gagcagccatgcaaactgtttgacacccagcaattccttattgaacttcaagattttgtc
cataatggccgacatttacccagacaccaggtggtgctatgttttggagacgagtacccc
gacccccagcgcccaaggaagatgatcacagcacaggtggagccagtgtttgccagaaaa
ctggtgtactattaccagcagagcaatggccactacatgcgggcttttgatcacacccag
gaacagaacacatctccaacaaacgactatccttcccagagatctctacagcatattcag
gagtga
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