Etheostoma spectabile (orangethroat darter): 116699001
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Entry
116699001 CDS
T08457
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116699001 (fubp1)
03041 Spliceosome [BR:
esp03041
]
116699001 (fubp1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116699001 (fubp1)
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116699001 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
116699001
NCBI-ProteinID:
XP_032387236
LinkDB
All DBs
Position
12:14944361..14954221
Genome browser
AA seq
671 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVAAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSGMGGMGGPRSISEEFKVPDGMVGFIIGRGGEQI
SRLQQESGCKIQIAPDSGGMPDRSVTLTGGPESIQAAKRLLTEIVEKGRPAPAFNHNDGP
GMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFK
VQQAKEMVMELIRDQGFREQRGEYGSRVGGGGGGGGGGGDSLDVPVPRFAVGIVIGRNGE
MIKKIQNDTGVRIQFKPDDGSTPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGG
GGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNP
PPNADPNIKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGPHGGPGPHGPPGPPGPP
GAPMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAY
YAQYSQQPQAPMTPTSGAPGTTQTNGQGDPKAAGQSGQADYSEAWEEYYKKMGQQGQQPQ
DYTKAWEEYYKKQGQAAPQATAAAAAASQPGGQPDYSAAWAEYYRQQAAYYGTANPQTMG
AAPQAPQVHPR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacagcagcgtggctcccccttcctctaacgctggtggtggaatgaacgac
gcttttaaagatgctctacagcgagcacgacagattgcagcgaagatcggtggtgatggc
gttgcggcacccccaacaaacgagtttggctacggcggacagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaccaaccagagacgaagaaagtg
gctacaaatgacgccttttcaggaatgggaggaatgggtggtccaaggtcaatatcggag
gaattcaaggttccagatggaatggttggatttatcattggaagaggaggcgaacaaata
tcacgtctgcagcaagagtctggatgtaagatacagattgcgcctgacagtggaggaatg
ccagatcggtcggtgacattaacaggaggaccagaatccattcaggctgcaaagaggcta
ttaacagagatagttgagaaggggcgcccagctcccgcattcaaccacaacgacggcccg
ggaatgacggtccaggagattatggtccctgcctctaaagccggacttgtcattgggaag
ggaggagaaactatcaaaagtcttcaggaaagagcgggagtgaagatggtcatgatccaa
gacggacctcaaaacacaggtgcagacaagccactccgcatttcaggagaaccctttaaa
gttcagcaagccaaagagatggtgatggagctgatcagagatcaaggattcagggagcag
aggggcgagtatggatcacgagttggtggagggggaggaggtggtggtggtggaggagac
agcttggatgttcctgtcccccggtttgcagtgggaattgttattggcagaaatggagag
atgatcaagaaaatacagaatgacacaggtgtcaggattcagtttaaaccagatgatggt
agcacaccggaccggatagcacagattatgggcccccctgaccaggctcagcatgcagca
gaaattatatccgatctgctgaggagtgttcaggccggtgggcccccagggcatggtggt
ggcggcagaggtcgtggtcgcgggcaggggaactggaacatgggcccccctggtggcctg
caggagttcaccttcactgtcccaaccatgaagactggcctcatcattggaaaaggtggt
gagacaatcaagggcattagccagcaatccggagccaggatcgagctgcaaaggaatcct
ccacccaacgctgatcccaacatcaaaatgttcacagttcggggctcccctcagcagatt
gactacgccaggcagctggtggaagagaaaattgggggaccagtcactccaatgggtggc
ccacacggtccacatggaggtccaggcccacatggtcctcctggaccacctggaccacct
ggggctcccatgggtccatacaaccctggaccatacaaccagggacctccaggaccccat
ggcccaccggcgccgtaccagcctcaaggatggggcaatggctacccacactggcaacaa
ggacaacctgatccaaataaagcagccgccgatgccaacgcagcagcgtgggcagcctac
tacgctcagtacagccagcagccgcaggctcccatgaccccgacaagtggagctcctggc
acaactcaaacaaacggccaaggtgacccaaaggctgcaggtcagagtggacaggcagat
tactccgaggcctgggaggaatattacaagaaaatgggtcaacagggtcaacaacctcag
gactacacaaaagcctgggaggaatattacaagaaacaaggtcaagcagcccctcaggcc
acagcagcagcagcagccgcttcccagcctggaggtcagccagactacagcgctgcttgg
gcggagtactaccgccagcaggctgcttactatggcacagccaaccctcagacgatgggt
gcagcaccacaagcccctcaggtacacccccgataa
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integrated database retrieval system
