Etheostoma spectabile (orangethroat darter): 116699060
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Entry
116699060 CDS
T08457
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116699060
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116699060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
116699060
NCBI-ProteinID:
XP_032387328
LinkDB
All DBs
Position
12:complement(27291748..27293137)
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AA seq
249 aa
AA seq
DB search
MNVSVSEMAKPLDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSE
KRPYIDEAKRLRAQHMKEHPDYKYRPRRKAKSLLKRDRFVFPLPSLLGDAAEHLKGFSMD
SFLVPGDKTRAFLAPVSSPSSFSLLEPVAQFSTGAVQRMAEIPHALAAGALPYSAHTFGY
KTGGIGGLACHGQHTHAHPHPSSSPGYVVPCSCSAWSAASLQPQVAYILFPGGMAKNGMD
SYTFPSTSV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtcagtttctgagatggccaaacctttagatcacatcaaaagacccatgaat
gctttcatggtgtggtccagaggccagaggaggaaaatggcccaggaaaacccaaagatg
cacaactctgagatcagcaagaggctcggcgcggagtggaagctgctgtccgactccgag
aaacggccgtacatcgacgaggccaagaggctgcgggctcagcacatgaaggagcacccg
gactacaagtacagaccacggcgcaaagccaagagtctcctgaagagggaccgcttcgtt
ttcccgctgccgtctttacttggggacgcggcggagcatttgaagggattttccatggac
tcctttcttgtccccggggataaaaccagagctttcctcgctcccgtctcctccccctct
tcattctcgctgctggagccggtggcgcagttcagcaccggagctgtccagcggatggcg
gagatcccgcacgctctggccgccggcgctttgccctacagcgcgcacacgttcgggtac
aagactggagggatcgggggtctggcttgccacggacagcatacccacgcacacccccac
ccgtcctccagcccgggatacgtggtgccgtgtagctgtagcgcatggtctgctgccagt
ttacagccacaggtagcctacattctcttccctggagggatggccaagaacggcatggac
tcgtacactttccccagcaccagcgtgtga
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