Etheostoma spectabile (orangethroat darter): 116699115
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Entry
116699115 CDS
T08457
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
116699115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116699115
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116699115
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
FancD2
MRP-S26
Connexin
Sec62
DUF3043
Motif
Other DBs
NCBI-GeneID:
116699115
NCBI-ProteinID:
XP_032387420
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All DBs
Position
2:12339164..12344777
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AA seq
684 aa
AA seq
DB search
MDSSTTLPPLTVPPHTVPQLSTDSDESSEDDLSAPESNRHCLLNTNNSNNNEEKKKKKRK
KEKEKKENKKKEKKEKEAKEAKEKEEKEKEKEKEKIKDKENPEEIFVINPAGNLYYNWLF
IITLPVMYNWTMIIARACFEELQHDYIMYWVILDYTSDLIYLADMFFRTRTGYLEQGLMI
KDKKLLVDRYIATFQFRLDFISMLPTDFLYFFLGLDYPEIRINRLLRIGRMMEFFTRTET
KTNYPNIFRIGNLIMYILIIIHWNACFYFSFSKYIGFGADDWVYPALDDPDEPAFGEFGR
KYSFSLYWSTLTLTTIGETPPPALDSEFFFHVIDFLVGVLIFATIVGNIATMISNMNAAQ
AQFQARIDNIKQYMQVRKVSKDLELRVIKWFEYLWNSGRAQDEREVMRYLPDKLKAEIGI
QVHMETLKKVRIFADCEAGLLIELVLKLQAQVFSPGDYICKKGDIGREMYIIKDGKLAVV
ADDGVTQFVVLGSGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMESLVE
YPDAKGMLEEKGREILMKDGLIDLDPANIIPEAKELEEKVNKLYSTLELMQFKLKKVLGN
YKNTDKALRHRIADLEHLTGEKVEDEDEEEEEGKKEDKTVEGEKKEEEEKGKEIKEVEEG
EKEKDEKVKYEEEKTKAVTEEEEK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcaaccacccttccccccctcactgtgccacctcacactgtaccacaactc
tccacagacagtgatgagtccagcgaggacgacctaagtgcgcctgaatcaaatcgccat
tgtctgctcaatacaaataacagcaataacaatgaagagaagaaaaagaaaaaaaggaaa
aaagagaaggagaagaaagaaaacaagaagaaggagaagaaggaaaaggaagcaaaggag
gcaaaagaaaaagaagagaaggaaaaggagaaggaaaaagaaaaaataaaggacaaagaa
aaccctgaagaaatctttgtcataaatccggctgggaatttgtattacaactggctgttc
atcatcacactaccagtcatgtacaactggaccatgatcatagccagggcttgctttgag
gagctgcagcatgactacatcatgtactgggttattctggactacacttcagacttaatc
tacctggctgacatgttcttcaggactcgaacaggttacctggagcaaggcctgatgata
aaagataagaagctgctagttgatcgctacatcgccaccttccagtttcgtctcgatttt
atctccatgctgcccactgacttcctctatttcttcctcggccttgattacccagagatt
cgcatcaacaggctgctgagaattggccgcatgatggagttcttcacgaggacagagact
aaaaccaactaccccaacatcttccgcattggtaatttgatcatgtacatcctcattatc
atccactggaacgcttgcttctacttctccttctccaaatacattggttttggtgctgac
gactgggtttacccggctttggatgatcctgacgagcctgcgtttggggagtttggcagg
aagtattcattcagcctctactggtcaacactgaccctgactaccatcggagaaactcca
ccaccagccctggactcagaatttttcttccacgtgattgactttttagtgggggtcttg
atctttgccaccattgtagggaacattgccaccatgatctccaatatgaatgctgcccaa
gctcagttccaggcccggattgacaacatcaagcaatacatgcaggtccgaaaggtcagc
aaggaccttgagttgagagtcatcaagtggtttgagtatctgtggaatagtggcagggct
caggatgaaagagaggtgatgaggtatcttccagacaagctaaaggctgagattggtatc
caggtccacatggagacactcaagaaagttcgtatttttgcagactgcgaggcaggcctg
ctgatcgagctggtgctcaagttgcaggcgcaggttttcagtccaggagactatatctgc
aaaaagggcgatattggccgggagatgtacatcatcaaagatggaaaacttgcagttgtt
gctgatgatggtgtcacacagtttgttgtgttgggaagcggcagctactttggtgagatc
agtattcttaatattaaaggcagcaaagctggcaatcggcgaacagccaacatccgtagc
attggatactcagacctcttctgcctgtccaaagatgacctgatggagtcactggtagag
tatccggatgccaaaggcatgctggaggagaaaggccgggagatcctgatgaaagatggt
ttgatagatttggacccagctaacatcatacccgaggccaaggagttggaagagaaggtt
aacaaattgtacagcacgttggagctaatgcaatttaagctgaagaaggttctgggaaat
tacaagaacactgacaaggctctgagacatcgcatcgcagatctggaacacctaacaggt
gaaaaggtggaagacgaggatgaggaagaagaagaggggaagaaggaagacaaaacggtg
gaaggggagaaaaaggaagaagaggaaaaaggcaaggagataaaggaagtcgaagaaggt
gagaaggaaaaagacgagaaagtaaaatatgaggaagaaaaaactaaagcggtaacagaa
gaggaggaaaaataa
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