Etheostoma spectabile (orangethroat darter): 116699201
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Entry
116699201 CDS
T08457
Name
(RefSeq) eukaryotic initiation factor 4A-II
KO
K03257
translation initiation factor 4A
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116699201
03012 Translation factors [BR:
esp03012
]
116699201
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116699201
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116699201
mRNA cycle factors
Stress granule specific factors
116699201
Translation factors [BR:
esp03012
]
Eukaryotic type
Initiation factors
eIF-4
116699201
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116699201
Exosomal proteins of bladder cancer cells
116699201
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
UvrD-helicase
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
116699201
NCBI-ProteinID:
XP_032387570
LinkDB
All DBs
Position
12:15612189..15616556
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AA seq
409 aa
AA seq
DB search
MSSDSADFNSSKDHGGPDGMEPDGVIESNWNEITDNFDDMSLKETLLRGIYAYGFEKPSA
IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLDIEVKETQALVLAPTRELAQQIQ
KVILALGDYMGAACHACIGGTDLRAEITKLQAEAPHIVVGTPGRVYDMLSRGHLSAKCIK
MFVLDEADEMLSRGFKDQIYEIFQKQSTNIQVVLLSATMPAEVLEVTKKFMREPIRILVK
KEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDF
TVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYI
HRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgattctgctgattttaacagctcaaaagaccatggggggccagatggaatg
gagcctgatggtgttatcgagagtaactggaatgagattacagacaactttgatgatatg
agcctgaaggagactcttctccgggggatatatgcatatggttttgaaaagccatctgcc
attcaacaaagggcaatcataccttgcatcaaaggctatgatgtcattgcccaggctcag
tcgggcactggcaagacggccacgtttgccatctctatcttgcagcaactggacatagag
gtgaaggagactcaggctctggtgttggctcccaccagagagctggctcagcagatccag
aaggtcattctggctctgggtgactacatgggggcagcatgccatgcctgcattggaggg
actgatctccgtgctgaaataacaaagctccaggctgaggcccctcacattgtggtgggc
acaccaggacgtgtgtatgacatgcttagcaggggacatctgtctgcaaaatgtatcaag
atgtttgttctggatgaagctgatgagatgttgagtcgagggttcaaagatcaaatctat
gagatcttccagaagcagagcacaaacattcaagtggtcctactctctgccaccatgcca
gcagaggtgttggaggtgactaagaagtttatgcgagaacccattcgcatcttggtgaag
aaagaagagcttaccctcgagggtatcaagcaattctacataaatgtggagagagaggag
tggaagctggacaccttgtgtgatctgtatgaaacactgactatcacacaggctgttatt
ttcctcaacaccaggagaaaagtcgactggttgactgagaagatgcatgctagagacttc
accgtctctgctctgcatggtgatatggaccagaaggagcgtgatgtgattatgagagag
tttaggtctggctcaagcagagtgttgattactactgatcttctggctcgtggaatcgat
gtccagcaggtttccctggtcattaattatgaccttcctacaaaccgagagaactacatt
catagaattggtcgtggtggccgttttggaagaaaaggagttgctatcaacttcgtcact
gaggaggacaagaggattcttcgggatatcgagacattttacaatactaccgtggaggag
atgcccatgaatgtggcagacctgatttga
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