Etheostoma spectabile (orangethroat darter): 116699209
Help
Entry
116699209 CDS
T08457
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116699209
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
116699209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DALR_1
DUF7310
Motif
Other DBs
NCBI-GeneID:
116699209
NCBI-ProteinID:
XP_032387585
LinkDB
All DBs
Position
12:26133966..26189907
Genome browser
AA seq
984 aa
AA seq
DB search
MRHRYAGAVHQHQTPDEKQASSKQSPDPVAPVFSLPPPPSSHHRDRTSSTAAHRQSLQEL
PCLSQPYRRPVHSGDPLPLASYDTAQQPAHRGTEPSTGQQDPWAPAGSQQQPPQSENQPV
FPSCHCSFSEQEASLSQNHHYPADPLPPQPSPPFPPPIPPPPTSSSSSLLFSQGSKRGDR
LRRSANNYQQASIVERCRGGGGAGGHRDQRQLLQQQQQQQQQQQQQQQHSHLRLQQRDPS
PEGTRANSQKGRSLNVCESTEANRRAFESQTQDLQQQQIPQLRAQQQLLVGSSLPINYCA
SGSGELCRTQQAPLLQQQGAPGLCPQRPQHCEQERNKSGRITAPGDSRVTPPATQQAYAG
NSSATGSNSSKDSPNYGSSYHLWPESPHKGEERIRIDLHKATTEQKKLSHAGSKPSLSES
SGRLPQIAMNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGN
GGEDPSKASNESLVREGSGHSGGRAPQKKNRDIGYRLGHRRALFEKRKRLSDYALIFGMF
GIVVMVTETELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADD
WRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFL
RLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWII
AAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAG
CTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKID
HAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSE
ELDKRIGTLEDKLDLVTGSLQALPCLISQAITQQQQDFLDGFVHRFRPASLASERSERSE
RSWTSTARRRRSPSTAPHTSSDSG
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtccatcagcaccaaacccccgacgaaaagcaagcg
agcagcaagcagagcccagacccagtcgctcctgttttcagcctgccgcccccgccctct
tctcaccaccgagaccgcacttcgagcaccgccgcgcaccgccagagcctccaggagctt
ccctgtctgagccagccctaccggagacctgttcacagcggcgaccctttacctctggcg
agctacgacaccgcccagcaacctgcacaccgaggcactgaacccagcaccgggcagcag
gatccctgggccccggccggctctcagcagcagccgccgcagtcggagaaccagcctgtt
tttccaagctgccactgcagtttttccgagcaggaggcgagcctttctcaaaaccatcac
tatcctgccgatcctctcccaccgcagccctccccaccttttccgccgcctataccgccg
ccaccaacgtcgtcttcctcctctctgcttttttcccagggatctaagaggggggatcgg
ctgcgaaggagtgccaataattaccaacaggcaagcatcgtggaacgctgcaggggagga
ggaggagcaggagggcaccgagaccaaaggcagctgttgcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcacagtcatttaagactccaacagagggacccctcc
cctgaaggaacccgtgcaaactcgcagaaagggcgctctttaaatgtatgtgagtcaacc
gaggctaacaggagagcatttgagtctcagactcaggacctgcagcagcaacagatccca
caattacgagcgcagcaacagctactggtggggagcagcttgccgatcaactactgcgcc
agcggctcaggagagctatgtaggactcagcaggctccactgctgcaacagcaaggcgca
ccggggctctgtccccagcgtccgcagcactgtgaacaagagcgcaataagtctgggagg
atcaccgcgccaggcgactcccgcgtaacccccccggcaacccagcaggcgtacgcgggg
aactcgtctgcgactggcagcaacagcagcaaagacagccccaactacggctcgagctat
cacctgtggcccgagagcccgcataaaggagaggagaggatacgcatcgacctccataag
gccactactgagcagaagaagctgagccatgctggatccaagccctccctctctgagagc
agtggccgactccctcagatagccatgaacacctgcaagtacaatggcggagtggtgaga
ccactagtgggcagcctggcgtcctcgtcgcgccgcaacctcgcagagctcgactcggag
acgcagcccttgcagacgctgcacagctctggcctggaggtggtggtgtcgaagggcaac
ggcggcgaagaccccagcaaggcgtccaatgagagcttggtcagggagggcagcgggcac
agcggaggcagggcgccgcagaagaagaacagggacattggctacaggctcggccaccgg
cgggcgctgtttgagaagcggaagcggctcagcgactacgcactcatcttcgggatgttt
gggattgttgtcatggtgacagagacggaactgtcatggggggtttacactaaggaatct
tcatactcatttgcactgaaatgccttatcagcctttccactgttatattgcttggtctt
ataataatgtaccatgccagggaaatccagctgtttatggtcgacaatggtgcggacgat
tggaggatagccatgacgtatgagcggatcttctttatcgtgctggagctgctggtgtgt
gctatccatcccatcccgggccagtacgtcttcacctggacggcgcggctggccttcacc
tacacaccgtcggtggccgatgctgacgtggacattatcctctccattcccatgttcctg
agactctacctgataggcagagtcatgttactccacagcaagctgttcacagacgcttcg
tctcgcagcatcggcgccctcaacaagatcaacttcaacacacgctttgtcatgaagacc
ctcatgaccatctgtccaggaactgttctgctggtgttcagtatatcatcctggatcatt
gctgcatggactgtgcgtgtctgtgagaggtatcatgacaaacaggaagtgaccagtaac
ttcctgggagctatgtggctaatttcgattaccttcctctccattggctacggggacatg
gtaccacacacatactgtgggaaaggtgtgtgtctgcttacagggattatgggagctggt
tgcactgcactggtggttgcagtggtagccaggaagctggagctgaccaaggctgagaaa
catgtccacaatttcatgatggacacacaactctgcaaacgagtaaagaacacagctgcc
aatgtactcagggaaacatggctcatctacaaacacactaagttggtcaagaagatcgat
cacgccaaggtgcggaaacaccagcgcaagtttctccaagccattcaccaagctcagaaa
ctgcgtagtgtaaagatggagcagaggaaactcaatgatcaggccaacaccttggtggac
ctggctaagacccagaatgtgatgtatgacctggtgtcagagctgcaggagcgcagcgag
gagttggacaagcgcatcggcacattggaggacaagctggacttggtgacgggcagcctg
caggcgctgccctgcctcatctcccaagccataacccagcagcagcaggacttcctggac
ggctttgttcaccgctttcgacccgcctcactagcctccgagcgctctgaacgttctgag
cgatcctggacttccaccgcccgtaggcggcgctctccctccacagccccacacacctcc
tccgatagcggataa
DBGET
integrated database retrieval system
