Etheostoma spectabile (orangethroat darter): 116699281
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Entry
116699281 CDS
T08457
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116699281 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116699281 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116699281 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
esp03029
]
116699281 (rb1cc1)
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116699281 (rb1cc1)
Membrane trafficking [BR:
esp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
116699281 (rb1cc1)
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116699281 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
116699281
NCBI-ProteinID:
XP_032387678
LinkDB
All DBs
Position
12:complement(9947852..9961271)
Genome browser
AA seq
1619 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLGKFDTSYTTYQR
DLEEIKVKLTKLGTSVSVMARIPLLECLTRHSYRESMEKSSSTPGKDSDETEEEKSTHSV
RHATDAQRPSKSSASFTAPVTAACEPTEDQEKNETTDSSGLRAALLDDDDDDDDDDDDDA
PGFANPTCFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTDCRDTIAKLD
NQNMKAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLS
HTNQLMIMLNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRL
LTELIERVRVVEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKR
ESFGKLFRKSFLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLYDLQYLKSCCPVEVQ
PFLMVPTMCDFEPLNRHVETLHKLFQAAESVDEMSQTITDLLSEQRISFSQRSTVFTPQS
GSIPETTTPRSSKTPSSLNLQGPSCQPLHVPIPAPLEDLSPDSIDAQTFDFETIGHPNMD
TILHQGSLDLDSLAESPESDFMSAVNEFVIEENMTSPNPISDPISPEMMVESLYSSVINA
IDNKRMQDTTIIERENSRIAFLKQVVDKYRSAAQESHSNFRSVKEDLYHLRGLVLKEQQD
FGFVLKNMTTEVQNIVDKICQTHELELKEQHQSELLSLRQELEKQVQTLTEENQVNQNIV
RDVQHAMLELEGLMERKEKELTQFENDKERWVEVESNQKDRIKNLEQMMSDQIEEIKILS
ASRDSLTCQLENLHFEIERSQQKIRQELEVVEQSHLKEMEDKIKQEHKAELETLTKVNQE
ALEHLAHENTAKLIEAADHHAIALQEKDNQMKDLDARITELAELRCKVEVELALKESETE
ELRLLLEDAKMQQAETVESQVEAATKALNEELADIKKQLDVKNEEYEVGLAELRTIMRIE
RDHCISELVDRHEEETILLRNELSSLQRQAQDAENNHAEQQQKLKQEMDQLAAAPSDEKE
KQLRSFQELEQELRTVISNLQAENDLLSKKLEQDRHAIEKDLEKAEASKVGSPDAFKELE
QQKEDMEKRLLDKVRQLENELHERQSSRSDEGLSLRAEGRADAGAPLSLDSALQERLQQE
RASLQSQMDLLEKKKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEKLRNVT
QQQEKDKALIETLSEDRASVMQEKKHLEEELNRLRSTTLVSSAFFAPNPSAQEITEAGAG
AAAAARALPVAGPFSSDPMAETDRLASVAAIRDDEQVDSAVEASMVTVHDNILMSEEKQR
ILLLKGVNDTLTLCFFESTNPRVSDFKAVAVSSGLGTNSIKSKRLTNTCCSHFGPPLTSS
LNLSCTGLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggtagcacattgacatttgacactgatctt
gctgtccaaactgtactggagcttaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagaggcgtgtttgc
agctacagtgctggcactgaaaccaaccccatattcctgttcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctcgattgagagtgagattcaggtt
aaggtggaggaatctctactgatgccagctgtctttcacactgttgcctcaagaacacaa
cttgctctggaaatgtttgaagttgccaagaaactttgcagtttttgtgaacgattggtt
catgatgaacaccttcaacaccaaggctgggctgccattatggctaatctggacgactgc
actctgtcttatcagaagttgctcgggaaatttgacacttcatacacaacttatcagcgt
gacttggaagaaattaaggtgaaactaacaaagttaggcacatcagtttctgtaatggca
aggatacctttgctggaatgtttgacaagacacagttacagagagagcatggagaagtcc
agttcaaccccaggaaaggattcagatgagacagaagaagaaaaatccactcactctgtg
cggcatgctacagatgcacagaggccctccaagtcatcagcatccttcactgccccggtg
acggccgcatgtgagccaactgaagaccaggaaaaaaatgaaacaacggacagtagtggg
ctgagagctgcgttattagacgatgatgacgacgacgacgatgatgatgatgatgatgct
ccagggtttgccaacccaacctgcttcaatgtcacactattagactggatcaacgtgcaa
gaccgacctaatgatgtggaatcggtagtgagaaaatgctttgactccatcaataggctt
gaccctcggattattcagcccttcctcacagattgtcgtgacacaattgccaagctagat
aatcaaaacatgaaagccatcaaggggcttgaggacaggttgtatgctcttgaccaaatg
attgcaagctgtaagaagttggtgaatgaacagaaagaactagctcagggatttttggcc
aatcaaaagcgggccgaaaacctgaaggatacatctgttctgcctgacttgtgtctaagt
cacaccaaccagctgatgatcatgctgaacaaccacaggaagctgctagacataaaaaag
aagtgcacaactgccaaacaagagcttgcaaacaaccttcaagtcagactcaaatggtgc
tgctacgtgatgcttcatgcagaccaggatggggagaagcttcaggctctactcagactt
ctgacagagctaatagaaagagtgagggtggtggaggccctcagtactgtccctcagatg
tactgcttggcggtggtggaagtcgtcagaagaaaaatgttcatgcgccactacagagag
tgggcttatgcacttgtgaaggatgggaaacgactgtacgaggcggagaagttcaaaagg
gaatcctttgggaaactcttcaggaagtctttcctaagaaatcgtttgtttagaggactc
gattcatggcctccaacatccttttgtacccgaaagcccagaaggtttgacgacgaactt
ccagacatctcactttatgacctgcagtacttgaaatcgtgttgtcctgtagaggtgcag
cctttccttatggttcccacaatgtgtgacttcgaacccttaaatcgccacgtagagaca
cttcacaagctgttccaagctgcagagagtgtggatgagatgtctcaaactattactgac
ttgctaagtgaacaaaggatatcctttagtcaaagatcaactgtgtttaccccacagtct
ggaagcataccggagaccacaacaccgaggtcctccaaaaccccttcctctcttaacctt
cagggacccagctgccagcccctacatgttcccatcccagctcctctagaggacttgtcc
ccagacagcatagatgcgcaaacatttgactttgaaaccattggccacccaaacatggat
accattctgcaccagggctcccttgacttggattctctagcagagagccctgaatctgac
ttcatgtctgctgtcaacgagtttgtgattgaagagaacatgacctctccgaatcccatc
agtgaccctattagccctgaaatgatggtggagtcgctgtactcttcagtcatcaacgct
attgacaacaagcgcatgcaggataccacaataatagagagggagaactcaaggatcgct
tttctcaaacaagtggttgacaagtaccgatctgctgcacaggagtctcattcaaacttc
agaagtgtaaaggaggacctctatcacttgagaggcctggtattaaaagaacaacaagac
tttggatttgttttgaagaatatgaccacagaggtgcaaaacattgtggacaaaatctgc
cagacccacgaactggaactgaaggagcagcatcaaagtgagcttctctcccttcgtcaa
gagcttgagaaacaggttcaaacactaacagaggaaaaccaagtaaaccagaacattgtc
agagatgtccagcacgcaatgctggagctggaggggcttatggagcgcaaagagaaagaa
cttacacagtttgaaaatgacaaagagcgatgggtcgaagtagagagcaaccagaaggat
aggatcaaaaacctggagcaaatgatgagtgatcaaatcgaagagatcaagatactttca
gcttcaagagactctctgacctgccagcttgagaatctgcactttgagatcgaacggagc
cagcagaagatccggcaggagctggaagttgttgagcagtcccacttaaaggagatggag
gacaaaataaagcaggaacacaaagcagaattggagacccttaccaaggtaaaccaggag
gctttggaacatctggctcatgaaaatactgcaaagttaattgaggcagctgatcaccat
gccattgcacttcaagagaaggacaaccaaatgaaggacttggatgctcgtattactgag
ctagcagaactccgctgcaaagtagaggtggagctagccctcaaagagtccgagacagaa
gagttgaggctcttattggaggatgccaagatgcagcaggcagagactgtggagtcccag
gtagaggcagcgaccaaagcccttaatgaagagctggcagatatcaaaaaacagcttgat
gtaaaaaatgaggagtatgaagtgggcctagcagagctgaggactatcatgagaattgag
agggaccactgcatctcagagctggtggacagacacgaggaagagactattttgttgcgc
aatgagctctccagcctgcagcggcaagcccaggatgctgagaataaccatgctgagcag
caacagaaacttaagcaggaaatggaccagctagcagctgctccaagtgatgaaaaagaa
aagcagttgaggagcttccaggaactggagcaggagctgaggactgttattagcaatttg
caggccgaaaatgacctgctctccaaaaaactagagcaggacagacatgcaatcgagaaa
gatttagaaaaagcagaggcctctaaggttggatcaccagatgcctttaaagagttggag
cagcagaaggaggacatggagaagagactgttagacaaagttagacagcttgagaatgag
cttcatgagagacaatcctccagaagtgatgaagggttgtccctgcgtgctgaggggcgt
gcagatgccggagcacctctgtctttagactctgcactacaagagcggctgcagcaggag
agggcctccctgcagtcccagatggacctcttggagaagaagaagaatgaggagatgcag
aacctcaagacatcactaatcgcagagcagcagactaatttcaacactgttctaacccga
gagaagctgaagaaggagcagatcatcaatgagctcacagagaagttgcggaatgtaacg
cagcagcaggagaaggacaaagctctgatagagacactctccgaggaccgagctagtgtc
atgcaggagaaaaaacacttggaagaagagcttaaccgcctgcgcagcactacactggtc
tcctctgccttcttcgctcctaacccctcagctcaggagatcacagaagctggagcagga
gctgcagctgcagctagagctctgcctgttgctgggcctttttcctctgaccccatggct
gaaaccgacagactggcctctgtggcggccattcgagatgacgaacaggttgattcagca
gtggaagccagcatggtgacagtccatgataacatcctgatgtcggaggagaaacagcgg
atactcctactaaagggggtaaatgacactctcacactctgctttttcgagagcacaaac
cccagggtttctgatttcaaagcagtcgctgtgtcgtcagggcttgggacaaattccatc
aagagtaaaagactgacaaatacgtgctgttcacattttggccccccccttacttcctcc
ctcaatctctcctgcacgggcctcaaaccagcatcagggacctcaagacggccgtgggta
cttggaaaggtcatggagaaggaatattgccaggcaaaaaaggcccagaacaggttcaaa
gttccattaggaaccaagttctacagagtgaaagctgttccgtggaacagaaaagtataa
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integrated database retrieval system
