KEGG   Etheostoma spectabile (orangethroat darter): 116699302
Entry
116699302         CDS       T08457                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
esp  Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:esp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:esp03041]
    116699302
Spliceosome [BR:esp03041]
 Complex B
  Other components
   Complex B specific factors
    116699302
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st LisH_TPL NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_VPS8 WD40_RFWD3 WDR54 Beta-prop_IP5PC_F VPS8_N PD40 DUF7165 LisH
Other DBs
NCBI-GeneID: 116699302
NCBI-ProteinID: XP_032387715
LinkDB
Position
2:12233922..12243278
AA seq 511 aa
MAVEMEPADVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIKSGHWDSVL
LAIKSLTLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYIHLENL
LTCSYFDPREAYLKGSSKEKRRRAIAEALVREVSVVPPSRLMGLLGQVGSMRIQQYPGQV
FPDTTIETSGNKDKHVEKESFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEV
WNFNTGKISKDLKYQAQDHFMMMDDAVLCMCFSQDTYLLATGAQNGKIKVWNIQSGLCLC
RFDYAHNKGVTCLSFSKDNNQILSASFNKTIRIHELRSGKLLKELNGHSSFVNDVSFTQD
GFHIISASSDGTVKIWNTKSCECIHTFKSPSWTSGVPVNNVIPLPQNPEHFVICNHSNMV
VIMSMHGQTVKTLSSDRKEKADFVCCTLSPHGEWIYCVGEDLVLYCFNYTTGRLQKTLTV
HEKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctgtggagatggagcctgcggatgtgatccgcctgataatgcagtacctcaaggag
aacaacctctacagaacattgaccaccttacaggaggaaaccaccgtctcgctcaacaca
gtggaaagcatcgacagcttcattgcagatataaagagcggccactgggactccgtcctg
ctggccatcaagtccctcacgttgccggacaacacacttattgacctttatgagcaggtt
gtaatggagctcattgaaatgagggaggtgggagcagcacgctcactcctcagacaaact
gacccgatgatcatgttgaagcagacgcagccagagaggtacatccatttggagaacctg
ctaacatgctcctactttgaccctcgtgaggcgtacctgaaaggcagcagcaaggagaag
cggcgcagggccatagccgaggccctggtgagggaggtcagcgtggtgcccccttcacgt
ctcatggggctcctgggacaagttggctctatgagaatacagcagtatccaggtcaagtg
ttccctgacacgaccatcgaaacatctggcaacaaggacaaacatgtggagaaggagagc
tttccaacacagctgtaccgccacatcaagtttgggaggcggtcacatgtggagtgtgcc
cgtttctctcctgatggcaagtacttaatcactggatcggtggacgggttcatcgaggtc
tggaactttaacactggaaaaattagtaaggatttaaagtaccaggcccaagaccacttc
atgatgatggatgatgctgtgttgtgtatgtgcttcagtcaggacacatatctactggca
actggagctcagaatggcaaaataaaggtgtggaatatccagagtggcctgtgcctgtgc
aggttcgattatgcccacaacaaaggtgtgacttgtctaagcttctccaaggacaacaac
cagatcctcagtgcctccttcaataagaccatcagaatccatgaattgaggtcaggcaag
ttgctgaaggagttaaacggccattcatcgtttgtgaatgatgtatccttcactcaagat
ggatttcacatcatcagtgcctcctctgacggcacagttaagatttggaatacaaaatcc
tgcgagtgcatccacactttcaaatctccgtcctggacatcaggagtccctgtcaacaac
gtgattcctctaccccaaaatccagaacactttgtgatttgcaaccactccaacatggtg
gtcatcatgagcatgcacggtcagactgtgaagaccttaagctcagatagaaaggaaaag
gccgactttgtgtgctgcaccctgtcgccccacggggagtggatttactgtgtgggagag
gacttggtgctgtactgcttcaactatacgacaggaaggctgcagaaaacgctgaccgta
catgagaaagatgtaattggcatcgctcaccacccacatgagaatctgattgccacatac
agcgaggatggcctcctaaggttatggaaaccttga

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