Etheostoma spectabile (orangethroat darter): 116699314
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Entry
116699314 CDS
T08457
Symbol
ptch2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116699314 (ptch2)
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
116699314
NCBI-ProteinID:
XP_032387728
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All DBs
Position
12:complement(6901320..6930264)
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AA seq
1481 aa
AA seq
DB search
MASDGGVPGAGVYGDLPPSYTRSQQPANPDVLRRPSYCHAAFALKQISKGKAVGQKAPLW
IRARFQALLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEQLWVEAGSRVST
ELRYTKEKQGEESVFTSQMLIQTPKEEGTNILTQEALLVHMEAALSASKVQVSLFGKSWD
LNKICYKSGVPIIENVMIERMIDKLFPCMIITPLDCFWEGAKLQGGSAYLPGMPDIQWMN
LDPVKLMEELSQFTSLEGFKEMLDKAQVGHAYMNRPCLDPSDPDCPLSAPNKEQGESPDI
AGRLQGGCHGFSRKFMHWQEELILGGRVKSSQEILLSAEALQTMFLLMSPKQLYEHFKDD
YEIHDINWNVEKATAILESWQRKFVEVVHQSMPSNSSQSLHAFSTTTLNDIMISFSDVSV
IRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAAT
TQVLPFLALGIGVDDMFLLAHSFTEAGSNIPFKDRTGDCLRRTGTSVALTSINNMIAFFM
AALVPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCLYSPCSDR
VIHLSPHELSDSGEQPHTPTTATAHTHQYSAGSTITTSTQITTTVQAFTQCDAAGQHIVT
ILPPTSQISTSPPSIIVCPTSQPQAITPPPTTTSVQDPYGSQLFTPTSSSTRDLLAQVED
SKSGKKCVPLPFLHWNLSSFAREKYAPLLLKPKSKVIVVVLFLGLLGLSLYGTTMVHDGL
YLTDIVPRDTKEYDFIDAQFKYFSFYNMYLVTMDGFDYARSQRLLIQLHNAFNSVKYVVR
DSDNKLPRMWVHYFQDWLRGLQAAFDADWQAGRITSDSYRNGTEDGALAYKLLIQTGSKK
EPFNYSQLTSRRLVDAEGLIPAEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYD
TTGENLRIPAAEPLEFAQFPFYLNGLRQASDFVEAIESVRSICDEFTRKGILNYPNGYPF
LFWEQYIGLRHWFLLAISVVLACTFLVCAILLLNPWTAGIIVFILAMMTVELFGIMGLIG
IKLSAIPVVILIASVGIGVEFTVHIALGFLTAIGNRNKRSAVALEHMFAPVVDGAISTLL
GVLMLAGSEFDFIMRYFFAVLAILTVLGMLNGLVLLPVLLSMMGPPAEVTPVDNASRLPT
PSPEPPLPPPMTHHGYYTGHQNPQSSRQQAFSESSDSEYYSEMTTTSGIGEEEYKYCDQS
AYIASQTSVPPATSHILLEASKNPSFPKLTVVKPFRENATGTGGRIEPFNESSHNAQSPL
GSQVTCWDGNKQQPGLQRLQAQHLPSDRANFPGRTCQSGPRLQNPRGPQPNRTKGPSYSN
SNSALPTGGPVTMVTATASVTVAVHPTLPGAAYQGYMHESFDTDSESDCFEAAKRTGDKT
NFSSCKRDSLELQDLDATHFQTEHQLGKTQGGLRIQAAKDC
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggatggcggggtcccaggggccggcgtctatggagatttacccccgagttat
acgcgctcccagcagcctgcgaacccagacgtactccggagacccagctactgccacgct
gctttcgcacttaaacagatctcaaaggggaaggcggtaggtcagaaagctcctctgtgg
atccgggcgaggttccaggccctcctgttctctctgggctgccacatccagaggcactgt
gggaaggtcctctttattggactcttagtattcggggctctgtctgtgggactccgagtc
gcagccatcgaaacggacatcgaacagctatgggtggaagctggtagtcgagtgagcacg
gagcttcgctacaccaaggagaagcagggagaggagtcagtatttacctcacagatgctt
atccagacccccaaagaagagggcaccaatattcttacccaggaggctttgctggttcac
atggaagccgctctgtctgccagcaaggtccaggtgtcactgtttggaaagtcgtgggat
cttaacaaaatatgctataaatcaggagttcctatcatagaaaatgtcatgattgaaagg
atgattgacaagctattcccctgtatgataatcaccccattggactgtttttgggaaggg
gccaaactacagggaggctccgcctatttaccgggtatgccagatattcagtggatgaat
ctagatccagtcaagctgatggaggaactgagtcagttcacttccctggaaggatttaag
gagatgttggacaaagcccaggtgggacatgcctacatgaacaggccatgtctagaccca
tcagaccctgactgccctctcagtgcacccaacaaggagcaaggagagagtcctgacatt
gctgggcgtctccagggtggttgccatggtttcagtcggaagttcatgcactggcaggag
gagctgatcctgggagggcgggtcaagagcagccaggagattctgctgagtgcggaggct
ctccaaaccatgttcctgttgatgagtcctaagcagctgtacgagcactttaaagacgac
tacgagatccatgacataaactggaatgtagaaaaggctaccgccatcctcgagtcctgg
cagaggaagtttgtggaggtggtccaccagagtatgccatctaactccagccagtccctc
catgctttctccaccaccacccttaacgacatcatgatatctttctctgatgtcagcgtc
atcagggtggctggaggatacctgctcatgctggcctatgcctgtgtgaccatgctaagg
tgggactgtgccaagtcccagggggccgtggggcttgccggggtgctgttggtggctctg
tcagtggctgcaggactgggtctctgctccctgcttggcctctctttcaatgctgccacc
acacaggtgcttcccttcttggcactagggattggggtggatgacatgtttcttctggct
cattccttcacggaggctggaagtaacatcccctttaaggaccggacaggagactgtttg
cgtcgcaccggcaccagtgtggctctgacttccatcaacaacatgattgcattctttatg
gctgctcttgtacccattcctgccttgcgagctttctctttgcaggcggccgtagtggtc
gtgtttaactttgccatggtgctgctcatcttccctgccatcctcagtttggacctccac
agacgtgaggataagcgtttggatattctctgctgcctgtacagcccctgctccgaccgc
gtcatccacctctctccgcacgagctgtcagactctggggaacagccgcacacgcctacg
acggcaacggcgcacacgcaccagtactcggcgggatcaacaatcaccaccagcacccaa
atcaccaccacagtgcaggcattcacgcagtgtgacgcagccggccagcatattgtcaca
atcctaccacctacctcacagatctccaccagcccgccatccatcatcgtctgccccact
tcacagccacaagccatcacacctccccccaccaccacctctgtgcaggacccctatggc
tcccagctcttcacgcctacctccagctccacacgggacctcctagctcaggtggaggat
tccaaatcgggaaagaagtgcgtcccactccctttcctgcactggaacctgtccagcttc
gccagggagaaatacgcccctctgctcctcaaacccaaaagcaaagtcatcgtggtggtt
ctctttctgggcctcctgggcctcagcctgtatgggaccaccatggtgcacgacggcctc
tacctaaccgacattgtgccacgtgacaccaaggagtatgatttcatcgacgcccagttc
aagtatttctccttctacaacatgtatctggtgaccatggatggatttgattacgcccgg
tcacagaggctgctgatccagctgcacaacgccttcaactctgttaaatacgtggtcaga
gacagtgacaacaaactgccccgaatgtgggtgcactacttccaggactggctaagaggt
cttcaggctgcttttgatgctgactggcaggcaggcaggattacctctgacagctatcgg
aacggcacagaggacggagcgctggcgtataagctcctcatccagaccggctccaagaaa
gagccttttaactacagccagctgacttctcgtcggctggtggatgcagagggtttgatc
ccggcggaggtgttttacatttacctgacagtctgggtcagtaatgatcctctgggctat
gctgcctcccaggccaatttctacccccatcctagagagtggattcacgacaagtatgac
actacaggggagaatctgcgcatcccagctgccgagcccctggagtttgcccagttccct
ttctacctgaatggccttcgccaggccagcgactttgtggaggccatcgagagtgtgcgc
tccatctgcgacgagtttactcgcaagggcattttaaactaccctaacggataccccttc
ctgttctgggagcagtacattggcctcagacactggttcctgctggcgatcagcgtggtg
ctggcctgcaccttcctggtctgtgccattctcctgctcaacccctggactgccggcatt
attgtgtttatcttggccatgatgacagtggagttgtttggcatcatgggtctgattggc
atcaagctgagcgccatccctgtagtcattctgatcgcctctgtgggcattggggtggag
ttcaccgttcacatcgcactgggcttcctgacagcgattggcaacaggaacaagcgctcg
gcagtggctctggagcacatgtttgcccctgtggtcgacggagcgatctccacactgctg
ggcgttctcatgctggcagggtcagagtttgacttcatcatgaggtatttctttgctgtg
ttggctatcctcactgtattggggatgctgaatggcttggttctcctgccagtcctcctg
tccatgatgggccctccagctgaggtcaccccagttgacaatgccagccgcctgccaacg
ccgtcccccgaacccccactgcctccacccatgacccaccatgggtactacacgggccac
caaaacccacagtcgtctcgtcaacaggccttttccgagtcctcggactctgagtattac
tcggagatgaccaccacgtcagggatcggggaggaggagtataagtactgtgaccagagc
gcgtacattgcatcgcagaccagcgttccacctgcaacctctcacatactgctggaagcc
agcaagaatcccagcttccccaagcttacggtggtgaagccattcagagaaaatgcaaca
ggcactggtggaaggatagaaccattcaacgaatcctcccacaacgcacagtcacctctc
ggctcccaggttacgtgttgggatggaaacaagcagcagccgggcctccagaggctccag
gcacaacacttacccagcgacagagctaacttccctgggaggacttgtcaaagtggcccc
aggctgcagaaccccagagggcctcagccaaacaggactaaagggccgagctatagcaat
agcaactccgccctgccaacagggggacctgttaccatggtaacagccacagcctccgtg
acggtggctgtgcatccaaccctgccaggggcggcataccaaggctacatgcatgaaagt
tttgacacggacagtgagtcggactgtttcgaggcagctaagaggactggtgacaaaaca
aacttttcttcatgtaagagagactctttagagctccaggacttggacgcaacacatttc
cagacagagcatcaactcggcaagacacaaggtgggttgaggatccaggcagccaaagat
tgctag
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