Etheostoma spectabile (orangethroat darter): 116699372
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Entry
116699372 CDS
T08457
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116699372 (tnn)
04518 Integrin signaling
116699372 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116699372 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116699372 (tnn)
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116699372 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
Fn3_Dep-1_3rd
Fn3_PBP1
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Fn3_Dep-1_2nd
DUF7949
EGF
Motif
Other DBs
NCBI-GeneID:
116699372
NCBI-ProteinID:
XP_032387797
LinkDB
All DBs
Position
12:7089480..7135272
Genome browser
AA seq
1120 aa
AA seq
DB search
MTTRLLWRALCPLVLLCTVSPFGLATNHPDPSAREQGVTFSHVYKIGIPGSSSCKLERLP
TQDETGLQTETTTNGENDIIFRHNIRLQTPMCDCAESESFKSLLYRVNGLEEEVNYLKTQ
CTQGCCGSGGAAGVDKSCSGYGTYQPDTCSCLCNPGWEGPDCSVSSCPDECNDNGRCVDG
KCVCHQGYTGEDCSQLMCPDNCNDKGQCVDGKCVCFPHFTGEDCSVQKCPNDCIGNGQCV
DGQCICEEGFFGEDCSLVLGPQGLRLVQLTDVSLLVEWDSVRGAEYYILTYHPKDDKSAL
EQVQVPNTESSYLITGLTPGVTYIVQVYAVIKEIQSEADTIEATTDFSAIDGIRVLGHTE
VSIQVDWKNPSAEVDLFRLKHTDPAGQEEELNVQRSQEARTKHTIVGLFPGTEYQISVQA
IKGTTEGKPSSVTGATDIDAPTNLVTTEVTEDTATVSWDRVQAEIEGYMLSYTSAEGSSI
DIPVGRDSTSYRLVGLKPGVLHTVYIWAFKGDKVSRKSSTEAETELDAPTNILARDEAES
SFWVSWDPTQAEIDGYTLTYSSSQGSSEEVPVGSDSTSYMLTGLRPGVPYTVYIWAIKGS
KVSRKISTKAETDLDAPANLLAQDVTETSFSVSWDPAQAESDGYIVTYSSSEGHSGEIPV
GPDSTSLMLTSLRPGVLYTVYIWAIKGNKASRKISTQAQTELDAPANLLAQDETETSFSL
SWDPVQAEIDGYILTYSSSEGFSEEIPVGSDSRSYMLTGLRPGVLYTVYIWAIKGSKVSR
KISTKAETDIDAPKDLKATDVTLDSAFLTWVPPLADIEGYTLSYRDEDGNMEVTGKRLGA
SENSFAVASLEMGKRYIVTIIAYTENKRSKVVETVFRTVGLMYPFPMDCVQIMKNGNKKS
AIYTVYINNDRSKPIEVYCDMETDGGGWLVLQRRTVGKLDFMKRWKPYIIGFGNMTDEFW
IGLDKIYELTNTPTQYELRFDLGLGAERAYAVYDNFKIAPVKQKFQLTIGKYSGTAGDAM
TYHQGRPWTTIDNDNDIALGNCALTHRGAWWYKNCHLANPNGKWGDNRHSLGVNWEPWKG
HLVSLDFTEMKIRPVGALSSRKTRSLMAREKSRTTNLQKK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagactcctgtggagggccctgtgcccgctggtcctactctgcactgtgtca
cccttcggcttggccactaatcacccggacccctcagcccgagagcagggagtcaccttt
agccacgtctataaaatcggcattccgggaagctccagttgtaaacttgaacgtctgcca
actcaggacgaaacaggtctgcagacagagaccactacgaatggagagaacgacatcatc
ttcagacataacatcaggctgcagacaccaatgtgtgactgtgcggaatcagaaagtttc
aagtcactcttgtatcgagtcaacgggctagaagaagaagtcaactacctaaagacccag
tgtacgcagggatgctgtggaagtggtggggctgcaggagtggacaagagctgcagtggc
tatggtacctaccaacccgacacctgcagctgcctctgtaacccagggtgggaaggccca
gattgctcagtgtcctcctgccctgacgagtgcaatgacaacggccgatgtgtggatgga
aagtgtgtgtgccatcagggctacacaggagaggattgcagccagctgatgtgtccagac
aactgcaacgacaagggacaatgcgtggatggaaaatgtgtgtgtttcccgcacttcacc
ggcgaggattgcagcgtccagaagtgtcccaatgactgcattggtaatggtcagtgtgtg
gacggccagtgcatctgtgaagaaggcttttttggggaagactgttcattagtcctcggc
cctcagggtctgcggttggtccagctaaccgacgtctcccttctggttgagtgggattca
gtccgtggggcagagtactacattttgacatatcatcccaaagatgataagagtgccctg
gagcaggtccaggttcccaacacagagagctcttacctcatcacaggactcactcctggg
gtcacctacattgtccaggtgtatgccgtcatcaaagaaattcaaagtgaagcagacacg
atcgaagctaccacagatttctccgctattgatggtatccgagttcttggccatacagaa
gtctctatacaggtggactggaagaacccatcagctgaggtggatctcttcaggctcaaa
cacactgacccggcaggacaggaggaggagctgaatgtacagaggagccaagaggcgcgc
accaaacacactattgttggtctttttccaggaacagagtaccaaatctcagtgcaggct
atcaaaggaaccactgagggaaaaccatcctctgtcactggtgccacagacattgatgct
cctaccaacctggtcaccactgaagtaacagaggacactgcaacagtttcgtgggatcgt
gtccaggcagaaatagagggctacatgttgagctacacttctgctgagggctccagcatc
gacatccccgtaggacgtgacagcacctcgtacaggctggttggcttgaagcctggagtt
ctgcacactgtctatatctgggccttcaagggagacaaagtcagcaggaagagttcaaca
gaagctgaaacagagctggatgctcctactaacatcttggcccgagatgaagcagagtcc
agcttctgggtgtcctgggatcccacccaggccgaaattgatggctacaccctaacctac
agctcttctcagggctcaagtgaggaagtcccagttgggtctgacagtacttcgtacatg
ctgactggcttgaggcctggtgtcccctacactgtctacatttgggccatcaaggggagc
aaagttagcaggaagatctcaacaaaagcggagacagacctggatgctcccgctaacctc
ttagcccaagacgtgacagagaccagcttcagcgtgtcatgggatccagcccaggctgaa
agtgatggctacattgtaacctatagctcttctgagggccatagtggggagatcccagtg
ggacctgacagcacctctttaatgctgactagtttgaggcctggggtcctctacactgtc
tacatctgggccatcaaaggaaacaaagccagcaggaagatctcaacacaagctcagaca
gaactggatgctcctgctaacctcttagcccaagatgaaacagagacctccttcagctta
tcatgggatccagtccaggcagaaattgatggctacatcctgacctacagctcctctgag
ggctttagtgaggagatcccagtcgggtctgacagcaggtcttacatgctgaccggtctg
aggcctggtgtcctctacactgtctacatctgggccatcaaggggagcaaagtcagcagg
aagatctcaacaaaagctgagacagatattgatgcccctaaggacctgaaggcgacagat
gtgacgctggattctgctttcttgacttgggttcctcctctcgctgacattgaggggtac
accctcagctacagagatgaggatgggaacatggaggtaactggaaaacggcttggagcc
agcgagaacagttttgctgtggccagtctggagatggggaagcgatatattgtcaccatc
attgcctacacggagaacaagaggagcaaggtagtagagactgtcttcagaacagttggc
ctgatgtaccccttccccatggactgcgttcagatcatgaagaatggcaataaaaagagt
gctatctacacagtctatattaacaacgaccgctccaaaccaattgaggtttactgcgac
atggagactgatggaggcggctggctggtgctccaacgacgtaccgttggcaagctggac
tttatgaaacgctggaaaccgtacattatcggttttggcaacatgacagacgagttctgg
attggtctggataagatttatgagctcaccaacactcctactcagtatgagctgaggttt
gacctgggactgggcgcagagagagcctatgctgtatatgacaacttcaagattgcaccg
gtcaagcagaagttccaactcactatcggcaaatacagtgggacagcaggtgatgctatg
acctaccaccaaggccgaccctggactactattgataatgataacgacatcgctctgggt
aactgtgccctgacccaccgtggtgcctggtggtacaaaaactgtcacctggccaacccc
aatggaaaatggggagacaacaggcacagtttgggagtgaactgggaaccgtggaagggc
cacctagtgtccctcgacttcaccgagatgaagatccgtcctgtgggagccctgtccagc
aggaagacgcgatctttgatggccagagagaagagcagaaccacaaacctccaaaagaaa
tga
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