KEGG   Etheostoma spectabile (orangethroat darter): 116699431
Entry
116699431         CDS       T08457                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
esp  Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:esp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:esp03019]
    116699431
   04121 Ubiquitin system [BR:esp04121]
    116699431
Enzymes [BR:esp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116699431
Messenger RNA biogenesis [BR:esp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116699431
Ubiquitin system [BR:esp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116699431
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 KH_BICC1_1st KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Mito_fiss_reg Prok-RING_4 zf-RING_5 zf-RING_UBOX
Other DBs
NCBI-GeneID: 116699431
NCBI-ProteinID: XP_032387872
LinkDB
Position
12:complement(3210040..3218788)
AA seq 656 aa
MPSPLFHPEIMDHDVVISSQHNGVGLPRETDQESREEDHHDALRFALDQLSLMALEKVDC
GSGGGGLVDTLDGTQGPGSEGCNGGGYVDLQMLEHPNGSRDSPTSCSPSPEYYGSGGYHM
ASSHSMLHGEQSSVLCSRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKT
PVRGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGGPGGGGGGTSSLPGPPH
LPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVDR
AREEIETHITLRTGTFVDLQGDNDFHSNGTDVSLEGLGALSGALGSSLWSRANGHHSVPP
PPPPPSPPPLPLPMSMHHSSNRKMSSSVAYHTHNGAMSSDNFSTSRKANEGGSPTSPFST
GSSGAGGGFTFGGDSTPGLPSDELGFEFTAANIWAPFVNGGAGNKTSGSSQQQQQPLRRN
SSGLSGGAITPRLSPTLSQDTGVGPLDHPLARRAQSDPLSTLSWLQSGNAGGGSFSGASS
SSSGGSSTGYSSCSASSLPGGSPTDSEGGGSGMILSSGMLSRLKGGSVSGVAGLVGVGPG
INRDCFVCFESEVTAALVPCGHNLFCMECAGQICQSTEPECPVCHTPATQCIRIFS
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgcctagccctttattccaccccgagattatggaccacgacgtggtgatcagcagccag
cacaacggggttggtctgccccgagagacagaccaggagtcccgggaagaggaccatcat
gatgcgctccgcttcgccctggaccagctgtcactcatggctctggagaaggtggactgt
ggtagcggaggcggcgggctggtcgacactctggatgggacccagggtccgggctccgag
ggttgcaacggagggggctatgtggatctacagatgctggagcatccaaacgggtcccgg
gactcgccgacgtcctgctctccatccccggagtactacggctcgggcgggtaccacatg
gccagctcgcattccatgctccacggggaacaaagctccgtcctttgcagcaggaaaaga
agtgtcaacatgactgaatgtgtacctgtccccagctctgagcatgtggcggaaatagtg
gggagacaaggttgtaagattaaggcattgcgtgccaaaaccaacacctacataaagact
ccagtcagaggcgaggagccagtgttcatcgtgacgggacgcagggaggatgttgagatg
gccaaacgggaaattgtctctgcggctgagcatttttctatgatccgggcgtcccgctgc
aaagctggagggcccgggggtggaggaggaggcaccagctctcttcctggaccaccacac
ttacctggacagaccaccatacaggtgagggtgccctacagagtagtcggtttagttgtt
ggaccaaagggagcaactatcaagcgcatccagcagcagactcacacctacatcgtgaca
cccagtcgagagaaagacccggtgttcgaggtgaccggcatgccagagaacgtggaccga
gcgagagaggagatcgagacccatatcaccctgcgaactggaacctttgtagacctgcag
ggagacaatgacttccactccaacggcacagatgtcagtctagaaggcctgggcgccctg
agcggggcgctggggtcgtccctgtggtccagggctaatggccatcattcggtcccccct
cctcctccaccaccctccccacctcctcttcccctccccatgtccatgcaccactcctcc
aaccggaagatgtcctcctcagtagcctatcacacgcacaacggcgcgatgagctcagac
aacttcagcacctctcgcaaggccaacgagggaggcagccccaccagcccctttagcaca
ggctccagcggtgctggaggagggtttactttcgggggtgactccaccccagggctgccc
tcggatgagttggggtttgagttcactgctgccaacatctgggcacctttcgtcaacggg
ggggcaggcaataagacgtccggctcctcccagcagcagcagcagcctctacgtcgcaac
agcagcggcctcagcggcggcgccatcactccaagattgtctccaactctgtctcaggac
acgggcgtgggccccctggatcatccattagcccgtcgtgcacagagcgaccccctcagc
actctctcctggctacagtctggcaacgcaggaggcggctccttctccggagcgtccagc
tccagctccggcggctcgtcgaccggttactcctcctgctcggcctcctccctgcccggc
ggctctcccactgactccgaggggggaggcagcggcatgatcctcagctctgggatgctg
agtcggctgaaaggcggctccgtgtccggggttgcgggtctggtcggcgtcggccccggg
atcaacagggactgtttcgtgtgtttcgagagcgaagtgacggcagccctggtgccttgt
ggccacaacctgttctgcatggagtgcgccgggcaaatctgccagtccactgaacccgag
tgtcccgtctgccacaccccagccacacagtgcatccgcatcttttcctaa

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