Etheostoma spectabile (orangethroat darter): 116699652
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Entry
116699652 CDS
T08457
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116699652
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116699652
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116699652
Peptidases and inhibitors [BR:
esp01002
]
Cysteine peptidases
Family C46: hedgehog family
116699652
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Morphogens
116699652
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hom_end_hint
Vint
DHQS
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
116699652
NCBI-ProteinID:
XP_032388244
LinkDB
All DBs
Position
12:22113904..22117756
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AA seq
414 aa
AA seq
DB search
MSEMVLMRATLSVALCLLLASVGSCCGPGRGHGKRRHPKKLTPLALKQFIPNVAEKTLGA
SGKYEGKITRNSDRFKDLAPSYNHDIIFKDEENTNADRLMTQRCRDKLNSLAISVMNQWP
GVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESK
AHIHCSVKAENSVAAKSGGCFPGSSIVILSDGRTKPLKELQVGDKVLAADQQGHLVPSDF
LMFMDQDKQIMRDFHVLETEEPRCRLTLTAAHLVFVMSNNNNSSDIRAVFSSNVKVGQWL
LVVGKDRPDHLIPARVTRIHVEKYRGSYAPVTSHGTIIVDWVLASCYAVVEDHDLAHWVF
VPVRLWRTFLSLVGMVKELSSVYQTEGVHWYPELLYHVGSWVLDSSSFYPQTGL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatggtcctgatgagagcgacgctgtcagtggccctctgcctgctgctggcg
tccgttggctcgtgctgcggaccaggcaggggacacgggaagcggaggcaccccaagaag
ctgacaccgcttgcgctgaaacagttcatccccaacgtggcagagaaaaccctgggggcc
agcggcaagtacgagggcaagatcacgcgcaactcggacaggttcaaggacctggctccc
agctacaaccacgacattatttttaaggatgaggaaaacaccaacgcagaccgactcatg
acacaaaggtgtagggacaaactgaactctttggctatttcagtcatgaatcagtggccc
ggggttaagcttcgagtcacagagggctgggatgaggatggtcatcattcggaggagtct
ctgcactatgagggcagagcggtggacatcaccacctcagaccgggacaagagcaagtat
ggcatgctgtccaggctggctgtggaggcgggcttcgactgggtatactatgagtccaaa
gcccacatccactgctctgtgaaagcagaaaactcggttgcagctaagtctggaggttgc
ttccctggttcgtccatcgtgatcttgtcagatggaaggactaaaccattgaaggagctc
caggtgggagacaaggtgctggctgcagaccaacaaggacatcttgttcctagtgacttt
ctaatgtttatggaccaggacaagcagattatgagagatttccacgtcctggagactgaa
gagccacgctgcagacttacactgacggcagctcacctggtctttgttatgagcaacaac
aacaacagcagcgacattagggccgtgttctccagtaatgtaaaagtaggtcagtggctt
cttgttgttgggaaagaccgtccagaccatctcatccctgcaagagtgacaagaattcat
gtggagaaatatcgagggtcctatgcacccgtaacatctcacggaaccatcatagttgac
tgggttttggcatcttgctatgcggtagttgaggaccatgaccttgcacattgggttttt
gtgccagtccgactgtggcgcacattcttgtccctggtcgggatggtgaaagagctcagc
agtgtgtaccaaacggagggtgtccactggtaccccgagctcctctaccatgtgggaagt
tgggttctggacagcagctctttttacccacaaacagggctttaa
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