Etheostoma spectabile (orangethroat darter): 116699748
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Entry
116699748 CDS
T08457
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116699748 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116699748 (gtf2b)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
116699748 (gtf2b)
Prokaryotic type
Archaeal type
TFB
116699748 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
116699748
NCBI-ProteinID:
XP_032388363
LinkDB
All DBs
Position
12:27189167..27198928
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AA seq
318 aa
AA seq
DB search
MASTSRGDALALPRVQCPNHPEAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPSDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacaagccgcggagatgccctggcccttcctagagttcagtgtcccaaccac
cctgaggccatactggtggaggactacagagcaggggacatgatttgccctgaatgcggc
cttgtagtaggtgaccgcgtaatcgacgtaggctcagagtggaggacgttctccaatgag
aaagccctcaaagatccatcccgagtgggagatgcccagaacccgctgctcaatgggggc
gacctaaccaccatgatcagcaagggaactggcgccgctagctttgacgaattcggcaac
tccaagtaccagaaccggcggaccatgagcagctcggaccgggccatgctcaacgccttt
aaagaaatcagcaccatggcagatcgcatcaacctgccaaggaacatcatagacagaaca
aacaacttattcaagcaggtttatgaacagaagagtctgaaggggcgagccaacgacgcc
atcgcttcggcctgtctctacatcgcctgcagacaagaaggtgtaccaagaacatttaaa
gagatctgcgccgtgtcccggatctccaagaaggaaataggccggtgcttcaagctgatc
ctgaaggcgctggagaccagcgttgacctcatcaccaccggagacttcatgtctcgcttc
tgctcgaacctgggcttgcccaaacaggtgcagatggcggccaccttcatcgccaggaag
gctgtggagctggacctggtccccggcaggagccccatctcagtggctgcagcagccatc
tacatggcctcccaggcctctgcagagaagaagacacagaaggaaatcggggatattgcc
ggtgttgcagatgtgacgatcagacagtcataccgactgatctacccgcgcgctgcagaa
ctcttcccttcagacttcaaattcgacacacccgtcgacaagctgccccaactgtga
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