Etheostoma spectabile (orangethroat darter): 116699954
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Entry
116699954 CDS
T08457
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4-like isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116699954
04082 Neuroactive ligand signaling
116699954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116699954
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116699954
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
116699954
NCBI-ProteinID:
XP_032388598
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Position
13:complement(29738715..29802824)
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AA seq
512 aa
AA seq
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MLGRQEDKLCGIFSALAALSFFCFVQSSSTGSTGMSVAKTTVDKLLKGYDIRLRPDFGGP
PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLNLTLDNRVADQLWLP
DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIVFFWQGGDSAVTGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSFRI
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK
IPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQKKINERLNKANNERTRYEEK
RLREQDSISVPFQTNTFRSFTQRRNLYLEEQRKVGVDAYGNILLTTLEMNNEVMPSDLGS
SVSDSRNSVMSFDSSGVQFRKPMAPRDGFSHHSLDRSAMRSRANCRLRRRSSKLKLKIPN
LSDVSTIDKWSRVIFPITFGFFNLIYWLYYVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcgtcaagaagataaattatgtggaattttctctgctctggcggctttgtcc
ttcttctgctttgttcaaagctcttccactggaagcaccggaatgtctgtggccaagacc
accgtggacaagttgctgaaggggtatgacatccgtttaaggcctgattttggaggtcct
ccagtcatcgtaggaatgagcatcaacatagcgagcatcgactccatctcagaagtaaac
atggactacaccatcactatgtatttccagcagagctggcgagataagcgtttggcctat
ggtgagctgaagctaaacctgactctggacaaccgtgtagcagaccagctttggctccct
gacacctacttcctaaatgacaagaagtcctttcttcatggtgtgacagtaaaaaaccgt
atgatccgactgcacccagatggcactgtcttatacgggctgagaataaccaccactgct
gcttgcatgatggacttgaggaggtaccctctggatgaacagaactgcaccctggaaatt
gaaagttatggatataccacagatgacatcgtattcttctggcaaggaggagacagcgcc
gtgacgggcgttgacaagttggagttacctcagttttccattgtagaactccgcttggtg
tccagggaggtcaggtttactacgggttcatatccaaggctttcgctgagtttcaggatt
aagaggaacattggatatttcatcctgcaaacatacatgccctctatcttgatcaccatc
ctctcctgggtctccttctggatcaattatgatgcctctgcagctcgggtggccctgggt
gtgacaacggtgcttaccatgactacaattaacacccaccttagggagactctcccaaag
attccgtatgtgaaagccatcgacgtctacctcatgggctgttttgtgtttgtgttcctg
gccctgctcgaatatgcctttgtaaattacgtgttctttggccggggccctgcgcaacag
aagaaaatcaatgagaggctgaacaaagccaacaacgagcgcacaagatacgaagagaag
cgcctgagggaacaggactccatttccgtgccgtttcaaaccaacaccttcaggtcattt
acacagcgaagaaatctgtatctcgaggaacaaagaaaagttggggtggatgcttatgga
aacatcctcctcaccacactggagatgaacaacgaagtgatgccttcagacctgggaagc
agcgtcagtgactctcggaattcagtcatgtccttcgacagctccggggtccaattcagg
aagcccatggcgccccgagatggcttcagccaccactcgctagatcggagcgccatgcgg
agccgggccaactgtcggctacgacgacgctcctccaagctcaagttgaagatcccaaac
ctgtcagatgttagcaccattgacaagtggtcccgggtcattttccctatcacctttgga
tttttcaacctaatctactggttgtactatgtgaattga
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