Etheostoma spectabile (orangethroat darter): 116700042
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Entry
116700042 CDS
T08457
Name
(RefSeq) serine/arginine-rich splicing factor 1-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116700042
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116700042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116700042
Spliceosome [BR:
esp03041
]
Common components
Common spliceosomal components
SR proteins
116700042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
116700042
NCBI-ProteinID:
XP_032388770
LinkDB
All DBs
Position
13:24242803..24246757
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AA seq
242 aa
AA seq
DB search
MSGGGIVRGPAGSNDCRIYVGNLPPDIRSKDVEDLFYKYGAIRDIDLKNRRGGPPFAFVQ
FEDPRDSEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGGGPMGPQRGRHGPPSR
RSEYRVVVSGLPSSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRQLDN
TKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSKSGSRRSRGSPRYSPRRSRSRSRS
RS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggaggtatagttcgaggaccggcagggagcaacgactgtaggatatatgtt
gggaatctccctcccgacatccgctcaaaggacgtcgaagacttattttataaatatgga
gccatccgtgatattgatctgaaaaatcgaagaggaggaccaccgtttgccttcgtgcag
ttcgaggacccgagggattctgaggatgctgtctatggccgcgatggttacgactatgat
ggttaccgcctgcgtgttgagtttcctagaagtggacggggaggtggaggaggaggtggt
ggtggtggtggtggaggaccaatgggaccccaaaggggaaggcatggcccgccttcccga
cgttcagagtacagggttgttgtatcaggtcttccttccagtggaagctggcaggacctg
aaggatcacatgcgagaagcaggtgatgtatgctatgctgatgtgtaccgtgatggcacc
ggggtggtggagtttgtacgcaaagaggacatgacctacgctgtccgtcaattggataac
accaagtttcgctctcatgagggagagacggcctacattcgtgtaaaggtggatggtcct
cgcagccccagctatggtcgttctcgctctcgtagccgaagtcgaagcaagagcgggtca
cgtcgcagcagagggtctccacgttactctcctcggcgttcccgctcccgctcccgttcc
cgctcctag
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