Etheostoma spectabile (orangethroat darter): 116700114
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Entry
116700114 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116700114
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116700114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
Sina_ZnF
F-box-like
Motif
Other DBs
NCBI-GeneID:
116700114
NCBI-ProteinID:
XP_032388895
LinkDB
All DBs
Position
13:20990370..20995039
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AA seq
708 aa
AA seq
DB search
MSAVTAWTTKPVIQRPVDMSNRSRGSRVRQHVHCDSCYSRRCRARVEVSVCCAVIPCRLL
CGALFHLCKEEDHLLLCPNVRVPCLNAEYGCPLHLSRSSQAAHLQVCPASVVCCSMEWLR
WPTDDTNPHSNDIALQEKVLKENEGQGEPLDLSMTLVDQSDLYDRLKMKPLYPELMEEEE
EEIKDEIKEETAVGGLVNGVTDKDTIEENNVVEETVLNSVGQCSGINKEKYNLCEMMFGM
EKGGCAVAQANQDNPKQKPKPGERVKDKDTEKDHAAPDTSKTGLAPWQEGVLERLGQELT
PQEYNMYVVHHGRMLLTFGQIKACTPREEDFVYGSLEPIPVQTLHSFKVPESYHYSRRRI
HQYDTTRPPGEPRSVDTSDLKVNEEDWFSDEAAATLLGYAEMEVRGHKISELRAADGLYV
DEGTQTHSFRKAPFKAKMTLAEVMVDRPLKIRLQLQSERVSSRHNRASSVFTFVCGHSFL
RREFATHFRNVHSDIQTGLSGWFEQRCPLSYLGCTYNQRRFQPSTHKATVSYNKQLRSFS
LRPTLRASVGDASQTSSSSGDSSTAQRKRGRGGEDSLSLLPYEVLCHMASFLDSLSLSQL
ALVSQLXXXXCXQERGMVTLRWEKKTYSHGGAKWRAKPVWEFSHLFSSVDSWHMADIPPI
SAHLKVCPYYETSLHSEPVPLPSMSDKQKCGQERLSLVDQFTGNRWQQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgtgaccgcttggactacaaaacctgtgattcaacgtcctgtagacatgagt
aatcgttctcgaggctccagggtgcgacagcatgtccactgtgattcctgctacagccgg
cgctgcagggctcgggtggaggtctctgtgtgctgtgcggtcatcccttgccgcctgctc
tgtggagctctcttccacctgtgtaaagaggaggatcacctgctgctctgccctaacgtg
agggtgccctgcctcaatgctgagtatggctgcccgctccacttgtcccgctcctctcag
gcagctcacctccaggtgtgtccggccagcgtggtgtgttgctccatggagtggctccgg
tggccgactgatgacacgaacccacacagcaacgacatagccctgcaagagaaggtgctg
aaggaaaatgaggggcagggggagcctctggatctttccatgaccctggtggatcagtca
gatctttatgaccgcctgaaaatgaagcctctctatccagagctgatggaggaagaagag
gaggaaataaaggacgagataaaagaggagacagcagtgggagggctcgtcaatggtgtc
acagacaaagataccatagaagagaataatgttgttgaagagactgtactgaacagtgtg
gggcaatgctcaggcatcaacaaagagaaatacaacctgtgtgagatgatgtttggcatg
gaaaaaggcggctgtgctgtcgctcaggcaaaccaagacaatcccaaacaaaagccaaag
cctggtgagagagtgaaagacaaagacacagagaaagatcatgcggctccagacacaagt
aagacaggactggccccttggcaggagggggtgctggagcgtctggggcaggagctcacc
ccgcaggagtacaacatgtatgtggtgcatcatgggcgcatgctgctcacctttggacaa
atcaaggcctgtacgccgagggaggaggattttgtgtatggcagcctggagcctatccca
gtccagaccctgcactctttcaaggttcctgaaagctatcactacagcaggcggcggatt
catcagtacgacacgactcggccaccaggcgagcctcgcagcgtggacacatcagacctc
aaagtcaacgaagaggactggttcagtgatgaagcagcagccaccctgctgggctacgct
gagatggaggtcaggggtcacaagatcagtgagttaagggcggccgacgggctttatgtc
gacgagggaacacaaacgcactcattccgcaaagctccgtttaaagcgaagatgaccctg
gcggaggtgatggtggacagaccgctaaagattcgtcttcagctgcagtcagagagagtg
agcagcagacacaacagagccagctctgtcttcaccttcgtctgtggtcactccttcctc
cgcagagagttcgccacacatttcaggaacgtccacagtgacatccagacaggtctgagt
ggatggtttgaacagagatgccccctatcgtatctgggatgtacctacaaccagaggagg
tttcagccctccacacataaagccactgtctcctacaataaacagctgaggagtttcagc
ttgcgtccaacactgcgagcctcagtgggtgacgcctcccaaacatccagcagctcaggg
gactcctccaccgctcagaggaagagaggtcggggaggagaggactctctgagcttgctg
ccctacgaggtgctgtgccacatggccagtttcctggacagtctgtccctgtcccagctg
gctctggtgtcccagctgatnnnnnnnnnntgcntgcaggagagagggatggtcaccctc
cgctgggagaagaagacctactcacacggaggagccaagtggagggccaaacctgtatgg
gagttcagtcacctcttctcctcagtggattcgtggcatatggcagacatccctcccata
tctgctcatctaaaagtctgtccttactacgagacctctctgcacagtgagcctgttccc
ctccccagcatgagtgacaaacagaagtgcggacaggaaaggcttagcctcgtcgaccaa
ttcacaggaaacagatggcaacaatga
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