Etheostoma spectabile (orangethroat darter): 116700120
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Entry
116700120 CDS
T08457
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
esp03012
]
116700120
Translation factors [BR:
esp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116700120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_MalT
GSKIP_dom
TPR_NPHP3
ANAPC3
DUF6340
TPR_2
Motif
Other DBs
NCBI-GeneID:
116700120
NCBI-ProteinID:
XP_032388906
LinkDB
All DBs
Position
13:20999956..21016702
Genome browser
AA seq
1692 aa
AA seq
DB search
MGNIVQCCHTLSNYCKCKDAAVQGEAERSPLLSSDESECKLLSDDSEDDLLTASTGVTNP
ALEPEHFLFPDIVLSSTLGGDVTLVEPMVCLLVSEEEEGVRVDETGDEGQERSNRWRNRG
VSEVETQTEVDTQIVMGVQTQTESQEEVQATEIRECDIETVESKVNTLVNTGITEEMVVD
VWEEQEILRQVDVLLEAQTSREKQSEIVTKVMSEKQKKGIDSGPWADMDIFVEVPGKVGR
QTEENKLAFGDIDKEAKQERKENHIHEELTSTSTKHIFQTEQNAELIDKLNTDEESVFKL
QKDNFTAQENTDFAWTEPTQENVKDKLHNINSESEKGTEHINNMDENIKSQKDIQLTKYS
IKSAGIVDSFDPAECGVDLTQKSDPDDKEMGQATVASDQNVNEMGCNINHGKTNNLSEDL
TNQSDGSTEYIHCQEPAKMEEEDKKTALSEMKKTLFLIDRLFLAAPHVKAPPGQYEESPE
DGRPQQSDADKRKLSISDIDLQGTDFTVKIQPPGTESFELQVSGQMLVEELHQVLMEHEI
TCHRTCFSLQLGGIMLDSLTELRSIQGIQDRVQIKVVEDSYTVRDARLHLRHVRDLLRSL
DPADAYNGVNCRSLSYLTFYTRGDRDSDRLVNRGASEKESFDCSPPEYILPGCKDRPLTP
LQPLRDDWKPLQCLRVLTMSSWNPPPGNRKMHGDLMYINVLTMENRELNITSSTRGFYLN
QSTAFNFNPKPAVPKILCHSLVELLSQVSPAFRKTFSVLQKKRVQQHPFERIAAPFQVFT
WVARHGDHTLDCVREEETHTSRMGQDEHTAGQSRDWNEELQGCRELTRNSLQERLQRERS
IFKTNSDFVAAATRGAVTVIDGNVMPLNPGEVPHMQMFIWNNLFFSLGFDIAEHYRPLGG
NPAAHAAALCDLRGAQAYASVDIEGLHTLGTAVVDYRGIRVIAQTIVPGILEKNQEQCVV
YGSNDYGKTVFTHPRFLKLLDKTSKPLRIQRHKVLDHRNSPVELCSGIETKGILGNDGRP
YILDLLRTFPPDLNFQFSETEERREVPKECQSFGYPRQHHHSLASLRPELIEAFVQHRYE
LYVKMVSQGLIQPEEQDKSTEKSEEPLCEPRTGETATAGADMENGIRKACEAVRSVSDSS
FDIRFNPNVCSPGVRFSSECVGEVQKQRQLLWDTAAFLLSNQIAAVLRDCLNHTVVPMDG
ETLTSVLHQRGVNVRYLGTLLTELDRVEEREKLSHIKRISISEVIIRSAKHIFRTYLQDV
EPAAFSAAVSHFLNCLLSSSSCLTDSSSDELLSRRRSRRRRSHGSRVILLTDSVWARLTP
SELWGRIRTEAGVYYHYTIDSESVDEVIEKHSLQRISLLREIAIKTGIQVQLREYVFESR
HRPVFGEEDVINMFPVVKHLKLTATDATQLVQHAQVAVQQGQLKDGYELISHALTLFSSV
CGVLHEDVCMCLRLLGQICYILGEYADALSHQEKVVMTTERIKGIDHPQTIQEYIYLALY
CFAGGRHSTSLQLLYRARYLTLLVSGEDHPQVAHLDSMLGLVLHGLMEYELSLKFLQNAF
ISTSKYHGAISLKHAHSHHLLATVYESKGEFRSALQHEKEAYSIYKIQIGENHDSTKESS
EYLRSLTQQAVILQKAINHIYSNTPSACIPPPKFSTPSPLTILHQLNLTCGIILIPLSAK
EIADLRTKLKGK
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatagtccaatgctgtcacacactgtcaaactactgtaagtgtaaggatgca
gcagtccagggtgaggcggaaagatcccctctgctatccagtgatgagagtgaatgtaaa
ttgctgtccgacgactcggaggacgatctgttaaccgcctccaccggcgtgacaaacccc
gccctcgaaccagagcactttctgtttcctgacatcgtcctaagtagcacactgggaggg
gacgtgactctggtggagccgatggtgtgtctgctggtgtctgaggaggaagagggagtg
agggtggatgagacgggagatgaaggacaagagaggagcaacaggtggagaaacaggggg
gtttctgaggtggagacacagaccgaagtggacacacaaatcgttatgggggtgcagact
cagactgagtcacaggaagaagttcaggcaacagaaatacgtgaatgcgacattgagact
gtagagagtaaagtaaacacactagtgaatactggcattacagaagagatggttgtggat
gtttgggaagaacaggaaatactgagacaggtggatgtgctcttggaggcacaaacatcc
cgagagaaacaatcagaaattgtcactaaagtgatgtcagagaaacaaaagaaagggata
gactctggaccctgggctgacatggatatttttgttgaggtgccagggaaggtgggaaga
caaacagaagaaaacaaattggcctttggagatatagacaaggaagccaagcaagagcgg
aaagagaatcacatccatgaagaactgacctccacttcaacaaagcatatatttcaaaca
gaacaaaatgcagagcttatagataagttaaacactgatgaagaaagtgtttttaagtta
caaaaagataattttactgctcaggaaaatacagactttgcctggacagagccgacacag
gagaatgttaaagacaaactacataacattaattcagagtctgagaaggggactgaacac
attaacaatatggatgagaacattaagtcacaaaaggatattcagctgacaaaatacagc
atcaaaagcgctggcattgtggatagctttgaccctgctgagtgtggtgtagacctgaca
caaaagagcgatccggatgataaagagatgggacaggcgactgtggcatcagatcagaat
gtaaatgaaatgggctgtaacattaatcatggaaaaacaaacaatctgtctgaggacctt
acgaatcagtcagatggaagtacagaatatattcattgccaggaaccggcaaaaatggaa
gaggaggacaaaaagacagctctgtctgagatgaagaaaaccttgttcttaattgacagg
ctgtttctggcagcaccacatgtcaaagcgcctccaggtcaatatgaagaaagccctgag
gatggtcgcccacagcagtctgatgcagataaaaggaaactcagcatcagtgacatagat
ctccaagggacagactttactgtcaaaattcaacctcctggaacagaaagctttgagctt
caggtctcaggccagatgttggtggaggagctgcaccaggtgctgatggagcacgagatc
acctgccatcgcacatgcttttccctccaactgggaggcatcatgctcgacagcctcaca
gagctacgctctatccagggcatccaggacagagtgcagatcaaggtggtggaagattcc
tacacagtgcgtgatgctcgtcttcatctcagacatgttcgtgatcttctgaggagcctt
gaccccgcagatgcatacaacggagtaaactgccgctcactctcttacctgacgttttac
accagaggagacagagatagtgacaggttagtgaacaggggagcttctgaaaaggagtcc
tttgactgcagccctccagaatacatcctccctggatgtaaggaccgaccacttacacca
ctgcagccactcagagatgactggaagccattacagtgtctgcgggttttgaccatgagc
agctggaatccacctccaggaaacaggaagatgcatggggacttaatgtacatcaatgtc
ctgacaatggagaacagagaactcaacataacatcctctacacgcggcttctacctcaac
cagtcaactgccttcaacttcaacccaaaacctgcagttcccaaaatcctttgccactct
ctagttgagctgctgagtcaagtcagccctgctttcagaaaaaccttcagtgtcctgcag
aagaagagagttcaacaacacccttttgagcggatcgcagctcctttccaggtgttcacc
tgggtcgcccgtcatggagatcacaccctcgattgtgtcagagaagaagagacacacacc
agtcgcatgggccaggacgagcacacagctgggcagagtcgggactggaatgaggagctg
caaggatgcagggaacttaccagaaactcccttcaggagcgcctgcagagagagaggagc
atatttaagaccaacagtgactttgttgccgctgcaacacggggtgctgtaactgttata
gacggtaatgtcatgccgttaaacccaggggaggtgcctcatatgcagatgttcatctgg
aacaacctgttcttcagcctggggttcgacatagctgagcactaccgcccactagggggc
aaccctgctgctcatgctgctgccctgtgtgacctgagaggagcacaggcatatgcatct
gtggacatagaggggcttcacacacttggaacagctgtggtggattatcgtggaatccgt
gttatcgctcagaccatcgttcctgggatactggagaaaaatcaagagcagtgtgttgtc
tatggctctaatgactatggaaaaactgtttttacacaccccagatttctgaagcttctg
gataaaacgagtaaaccgctaagaatccaacgtcacaaagtgctcgaccacagaaacagc
ccagtggaactttgctctggcatcgagaccaaaggcatcctgggtaatgacggaagaccc
tacatcttggaccttctccgaaccttcccccctgaccttaacttccagttctcagagaca
gaggagaggagggaggtgccgaaagagtgtcagagctttggttacccacggcaacatcat
cacagcttggccagcctgagaccagagctgatagaggccttcgtccagcataggtatgaa
ctttatgtcaagatggtgtcccaggggctcattcagccagaagaacaagataaatccacg
gagaagagtgaagagccgctctgtgagccgagaactggggaaacagccacagccggtgct
gacatggaaaatgggattaggaaagcttgtgaggctgtccgatccgtgagtgactccagc
tttgacatccgcttcaatcctaatgtttgctctccaggcgttcgtttctcctctgagtgt
gttggggaggttcagaagcagagacagttgttatgggacacggctgcttttctactgtcc
aatcagattgcagcagtgcttagggattgtctcaaccacacagtagtgccaatggatgga
gaaaccctgacctcagtgctgcaccagcgaggcgtgaacgtacggtacctgggcacctta
ctgactgagctggacagggtggaagagagagagaaactcagccacataaagagaatttct
atcagtgaagtcatcatcagaagtgcaaaacacatctttaggacctatctacaggatgtg
gaaccagcagctttctcagctgccgtcagtcacttcctaaactgcctcttgagctcctcc
tcctgtctcaccgactcctcctcagatgagttgctctctcgccgcaggagcagacggcga
aggagccacgggagtcgagtcatcttgttgacagacagtgtgtgggccagactaacgccc
agtgagctgtggggccggatcaggactgaggctggagtttattaccactacacaattgac
agtgaaagtgtagatgaagtaatagaaaagcacagccttcagaggatctccttactgaga
gagattgccatcaagacgggcatccaggtgcagctgagggagtatgtgtttgagtctcgc
cacaggccagtgtttggcgaggaagatgtcatcaacatgttccctgtggtcaaacatctc
aaacttacagcaacggatgccacgcaacttgtgcaacacgcacaggtggcagtacagcag
gggcaactcaaagatggctatgaattgattagccatgccctgactctgttcagcagcgtg
tgtggggtcctgcatgaggacgtgtgcatgtgcctgcgtctcctgggacagatctgctac
atcctgggggaatatgcagatgccctcagccaccaggaaaaggttgttatgactactgag
agaataaaaggtatagatcatccacagaccatacaagagtatatttacctggccctgtac
tgctttgctggaggccgacattcaacctccctacagctgctgtatcgcgctcggtacctc
acactgcttgtgagtggagaagaccatccccaagtcgcacacctggatagtatgctgggt
ctagtacttcatggactgatggagtatgagctttccttgaagtttctacagaatgccttc
atttcaacctcaaaataccacggtgccatatccctaaagcatgcacacagtcatcatctg
ctcgccactgtgtacgagagtaaaggagagtttcgatcagctcttcaacacgagaaagaa
gcatattcgatatataaaatccagattggggagaaccatgatagtacaaaggaaagctca
gagtacctgaggagcctcactcagcaggctgtgatcctccagaaagccatcaatcatatc
tacagcaacacacccagtgcctgtattccacctccaaagttttccacacccagccctctc
acaatccttcaccagctcaacctgacatgtggaatcattctcattcccctcagtgcaaaa
gaaattgcagacctgaggactaaattaaagggaaagtaa
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