Etheostoma spectabile (orangethroat darter): 116700141
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Entry
116700141 CDS
T08457
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04517
IgSF CAM signaling
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116700141
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116700141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
esp04812
]
116700141
Cytoskeleton proteins [BR:
esp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116700141
Intermediate filaments
Intermediate filament-binding proteins
116700141
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
UPF0508_N
Motif
Other DBs
NCBI-GeneID:
116700141
NCBI-ProteinID:
XP_032388954
LinkDB
All DBs
Position
13:complement(3578631..3616625)
Genome browser
AA seq
1576 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGLELIQEKPELRSVVQQK
LEEIRECWSDLESTTKAKARQLFENNKPEPAVKSYSDLDHQLSHLEQQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGVCLPQRGMMAGDRVGGDREASEQSGMVETR
IVRLIEPLKERRRILLASKEMHQVAQDLEDEMMWIQERLPLASCKDYGNNLQVVQQHVKK
NQTLQRELTGRRARVEEVLDRAGIIASLRTPEVEFVREGAAHVRQLWEVLQLETERRCVM
LEATLQAQQYYSEAVKVESWLSGQKLQLVNEEKGTDEASTLQLLKAHLALEQTVETYAET
VGMLSQQCQRLRELGHPERCGLTQRLTCTHKAAHIAQEKSDQITKQQCHIDRLYVSLKDM
VEHRKTKLEQQYWLYQLNKDVEELEKWITERETVASSTDLGQDLEDVTVLQERFTKFSSE
TNSIGQQRMEQVNKMVNEMIDCGHSDAATIAEWKDGLNESWADLLELMETRRQMLAASHQ
LHKFFTDCKEVLAQIAGKMKQLPEVRACQANITNPATLQRLMHSFEHALQLLVAQVRQLQ
ENAAQLRTIYAGEKAEAIMVKEQEVMEAWKELLSSCEASRVQVTSVTDKVQFFSVVRENL
MWMEGIMGQIVWDEPRDLTALEVMMKQHQDLKAKVDGRSKTIQQCADLGKILIAAGNPAS
EEIKEKLDSLLAKQRDLVEKWDRHQERLQRKQEHFQFAQETVKAEAWLKAKEPLITSKEP
EGGGAQAQTDEVEQLILRHEAFRKAAVTWKERFSSLRQLSAAEKKKEEEKKTTPLSSRRM
FPLSCLTPSVPATSATSSFLRQTVQAHIEPKPLQTRLDLGATPSTQRLSSTLASYKPVIN
GSGYQGLEQHCSGKLVSSSYLGMNHQAAGGGSDSGFSALTSQSGGADTSTYLGINHQTSG
SAESSGYFGLTTGCVGGTQNHLGSGRLGSSGNIAQQPSSGGMGSPGFLPQQNMGSSGYLG
HQPNLGSTGYLAQQPNMGSTGYLAQQPNMGSTGYLAQQPNMGSTGYLAQQPNMGSTGYLA
QQPNMGSSGYLAQQPNVVSSGYLAQNYQSSGGLGSSGFLAQNHYSSGSLGSSGYLVQSGG
IMDPKMAYAWQHLKADFMQPRINHIHKAVNPLLEASRVQREQFGDIPMANMVGPESGLEL
LHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQARLNELPLIVRQERYRRRLE
RQSSSEQEGSSKQRLQRQDSSDLEGSVKEGSDKRSGEKRSTMAEIVEQVQEREAANARGD
PYRPGSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPEETRRSRSAPATGAPTTPQPPSHT
AHNEGFLYRKKATTSDLEAQQRSPNSKSWVNVYCVLKEGQLTFYKDARNHTTTYNEEPPV
DLSNCTFDPSMGYKKKKNVFILQINDGINFAFHAKDEEDLKAWTSNITTCIAEHEAMGTW
DKPGTSSMDPDHSERKEKSEGDADARSERSELAEGEERSEKERSEKGDGSEKLDTSEIAD
KMEGGAGGSSTSGKSK
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggcccgagacacagcgcgggacgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcggaactggcccgcaataaagaatggcttgccaagatagaa
caggagggtctggagctgatccaggagaagccggagctgcgttcggtcgttcagcagaag
ctggaggagatcagagagtgctggagcgacctggagagcaccaccaaggccaaggcgcgc
cagctctttgaaaacaacaagcccgagccggcggtgaagagctactcggacctggaccac
cagctctcgcacctggagcagcagcccccccagctggagcaggcacaccatctgcccacc
ttcaatgagcaactccagaaattccaggctatggagtctcagataggggacttttacaag
gatgtgggagagctggggagcttgcagggggtctgcctaccccagcgagggatgatggca
ggtgacagggtgggcggcgacagggaggccagcgagcaatcaggcatggtagagacccgc
atcgtccgcctcattgagcccctgaaggaaagacgccgcatcctgctggcttccaaggag
atgcatcaagtcgcccaggacctggaggatgagatgatgtggattcaggagcggcttccc
ttggcctcctgtaaggattatggaaataacctccaggttgtacagcagcatgtaaaaaag
aaccagactctccagagggagctgacggggcgacgcgcccgtgtggaggaggttctggac
cgggcggggatcattgcttcgctgaggactcctgaggtggagtttgtgcgtgaaggggcg
gcgcatgtgcgtcagctgtgggaggttttgcagctggagacagagaggaggtgtgtgatg
ctggaggccacgctgcaggctcagcagtactacagcgaggcagtcaaagtggagtcctgg
ctgtcaggtcagaagctccagctggtcaatgaagagaaaggcacggacgaagcgagcacc
ctgcagctgctgaaggcccacctggctcttgagcaaacggtagaaacatatgcagagaca
gtaggcatgctatcccagcaatgccagcgtctacgagaactcggacacccagaaaggtgt
ggcctgacccaacgtctcacgtgcactcacaaagcagcacatatagcccaagaaaagagt
gatcagatcaccaagcagcaatgccacatagaccggctgtatgtgtctctgaaggacatg
gtggagcacaggaagaccaagttggagcagcagtactggctctatcagctcaacaaggac
gtggaagagttagagaagtggatcactgagcgagagactgtggccagttcaactgacctg
ggccaagacctcgaggatgtcacggtgcttcaggagagattcaccaagttttcctcagaa
accaacagcattggccagcagcgcatggagcaggtgaacaaaatggtcaacgagatgatc
gactgcggccactcggacgcggccaccatcgccgagtggaaggacggactgaacgagtcg
tgggctgacctcctggagctgatggagacgcgcaggcagatgctggcagcatcgcaccag
ctgcacaagtttttcactgactgcaaagaggtcttggctcagatcgcagggaagatgaag
cagctgccagaggtgagggcgtgccaagccaacatcaccaatccagccaccctgcagaga
ctcatgcactcctttgagcatgcccttcaactgctagttgcacaggtgaggcagctgcag
gagaacgccgcccagttgagaaccatctatgctggtgagaaggcggaggccatcatggtc
aaagagcaggaagtgatggaggcctggaaggagctgctgagctcctgtgaggccagtcgc
gtccaggtcacttcagtaacagacaaggtgcagttcttctcagtggtgcgggaaaacctg
atgtggatggaaggcatcatggggcagatagtatgggatgagcccagggatttgacggct
ctggaagtgatgatgaaacaacatcaggatctgaaagctaaagtggatggccgcagcaag
accatacagcagtgtgcagatctgggcaagatccttatagctgcaggcaaccctgcatca
gaggagataaaagagaagctggacagtcttctggctaagcagagggatcttgttgaaaaa
tgggacagacaccaagaaaggttacagcgcaagcaggagcatttccagtttgcccaggag
acggtaaaggcggaagcctggctgaaggccaaggagccgctgatcacctccaaggagcca
gagggaggaggggcccaggcgcaaacagacgaggttgagcaactcatccttcgccacgag
gccttccgcaaggctgctgtaacctggaaagaacgcttcagctctctccgccagctttcc
gcagctgagaagaaaaaagaggaggagaaaaagacaaccccactctccagccgaaggatg
ttcccattatcatgtctgactcccagtgttcccgcaacaagtgctacctcatctttcttg
aggcaaacggtacaggcacatatagaaccaaaacccttacagaccaggctggatctgggt
gccaccccttcaacccagaggttgtcctcaactctagccagctacaagccagttataaat
ggatcaggctaccaaggactggaacagcattgcagtgggaagctggtgagctcctcgtac
cttgggatgaaccaccaggcggccggaggtggaagtgattccggtttctcggcgctgacc
tcccaaagtggtggagcagacacttctacttaccttgggataaaccatcaaacttctggc
agtgcagagagctctgggtactttggactgactacggggtgtgtgggtggtacgcaaaac
catctaggcagtggcaggttaggaagttcaggtaacatagctcagcagccaagcagtgga
ggtatgggaagccctggctttctgcctcaacaaaatatgggcagttctggatacttggga
catcaacctaatttaggaagtacaggatatttggcacaacagcctaatatgggcagcact
gggtacttggcacaacagcctaatatggggagcactgggtatttggcacaacagcctaat
atggggagcactgggtatttggcacaacagcctaatatggggagcactgggtatttggca
caacagcctaatatgggaagctctgggtatttagcacaacagcctaatgtggtgagttct
ggatacctagcgcagaattatcagagcagtgggggattgggtagctcaggctttctggca
caaaatcattacagcagtggaagtctgggcagttctggatacctggtgcagagtggtggc
atcatggaccctaaaatggcgtatgcatggcagcacctgaaagctgactttatgcaaccc
aggatcaaccacatccacaaggctgtaaacccccttctagaagccagcagagtgcagcgg
gaacagtttggggacatcccaatggcaaacatggtggggccagagtcagggctggagctc
ctccacggccgtctgcagagggatccccggggcagccgctctgatcctcagatggaccat
ctcaggcgagagagggagtacaagctgggtagacagacctccagcgaacaagagatccag
gccaggctgaacgaactgcctctgattgtgcgtcaggagcgctaccggaggcgcctggag
aggcagtcgtccagcgaacaggaggggagcagcaagcagaggctgcagagacaggactcg
agtgacctggagggctctgtgaaagagggatctgacaaacgctcaggggagaagagatct
actatggcagagattgtagaacaggtccaggagagagaggcggcaaatgcccgaggagat
ccttatcgccctggaagcagcctctcagcacctgtgactcgttttgacggacgccctcgt
gcgcgagaccgccccaaaccgaggaggaggccccgtccaaaggaacctgaggagacacga
cgttctcgctccgctccagctaccggtgccccaacaacacctcagccgccttcacacact
gcccacaacgaaggcttcctctaccgcaaaaaggccaccacatctgaccttgaagctcag
cagagaagcccaaacagcaagtcctgggtgaacgtatactgtgtgcttaaagagggacag
ctgaccttctacaaggatgctcggaaccacaccacgacgtacaatgaagagcctcctgta
gaccttagtaactgcacattcgatccttcaatgggatacaagaagaagaagaatgtcttc
attcttcaaataaacgatggaatcaactttgcattccatgcaaaagatgaggaggacctg
aaggcttggacttcaaacatcaccacctgcatagctgagcacgaggccatgggcacgtgg
gacaagccgggaacctcgtccatggaccccgaccactcggagaggaaggagaagtcggag
ggggacgcagacgccaggtccgagaggtccgagctcgccgaaggggaggagaggtctgag
aaggagaggtcagagaaaggggatggctcggaaaagttagacacgtccgaaattgccgac
aaaatggagggcggggcagggggctccagcacgtctggaaagagcaaatga
DBGET
integrated database retrieval system
