Etheostoma spectabile (orangethroat darter): 116700298
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Entry
116700298 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04137
Mitophagy - animal
esp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116700298
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116700298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116700298
03009 Ribosome biogenesis [BR:
esp03009
]
116700298
04131 Membrane trafficking [BR:
esp04131
]
116700298
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116700298
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116700298
Ribosome biogenesis [BR:
esp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116700298
Membrane trafficking [BR:
esp04131
]
SNARE
SNARE associated proteins
Others
116700298
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116700298
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116700298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_2
AAA_33
AAA_22
TIP49
AAA_14
Vps4_C
RNA_helicase
ATPase_2
NPHP3_N
Parvo_NS1
AAA_28
Mg_chelatase
AAA_7
DUF815
nSTAND3
ATPase
IstB_IS21
AAA_18
ABC_tran
AAA_17
AAA_24
NACHT
TsaE
ResIII
Viral_helicase1
Sigma54_activat
NB-ARC
PhoH
AAA_lid_PRS2_C
SLFN-g3_helicase
Cytidylate_kin
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
116700298
NCBI-ProteinID:
XP_032389263
LinkDB
All DBs
Position
2:complement(21515648..21526388)
Genome browser
AA seq
808 aa
AA seq
DB search
MPGSGEADPKGEDFSTAILKQKHRPNRLIVDEALNEDSSIVSLSLIKTEELQLFRGDTVV
LRGRKCRQTVCIVLTDETCGHERIRMNRVTRNNLRVRLGDVISIHACPDIKYGKRIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPIHKGDIFLVRGSMRAVEFKVVETEPSPHCIVAP
DTVIYCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAQKNAP
AIIFIDELDAIAPKREKVNGEVERRIVSQLLTLMDGLKQRAHVVVMAATNXPNSVDPALR
RFGRFDREIDIGIPDLTGRLEIMQIHTKNMKLAGDIDLERIAKETHGHVGADLAALCSEA
ALQAIRKKMILIDLEDESIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEVPQVNWED
VGGLDQVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGGGDGSGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRTAILN
ANLRKSPVARDVDLDYLSDITDGFSGADLTEICQRACKMAIREAIEAEIKAERQRQTRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDSDIRKYEMFAQTLQQSRGFGNFRFPSATG
TRSGGQGSGSGSERPGEYREESNDDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctctggagaagcagacccaaagggagaagatttctccactgccatcctgaaa
cagaaacacagaccgaacagactcattgtggacgaagccctcaatgaagacagcagcatt
gtcagcctgtcactgattaagacagaggagctgcagctcttccggggtgacacggtggtg
ttgcgagggaggaaatgtcgccaaacagtgtgcattgtcctgacagatgaaacctgtggg
catgaacgaatccgcatgaatcgtgtgacgcgcaacaatctgcgtgtccggctcggtgat
gtcatcagtattcatgcctgtcctgatatcaagtatgggaagcggatccatgtcctccct
atagatgacaccatcgagggcctgacaggaaacctctttgatgttttcctcaaaccgtat
tttctggaggcttaccggcccatacataaaggtgacatcttcttggtgagaggaagcatg
cgggcggtggaattcaaggtggtcgagactgaaccaagcccccactgcattgttgccccc
gacacggtcatctactgcgagggagagccaatcaaaagagaggatgaagaggagagcctt
aatgacattggctatgatgacatcggaggctgtcggaagcagctggcccagatcaaagag
atggtggagcttcctctcagacaccccggccttttcaaggctatcggtgttaagcccccc
agaggaatcctgctgtatggccctgcaggcacagggaagaccctggtggccagggctgta
gccaatgaaactggtgcctttttctttctcatcaatggtccggagatcatgagtaagctg
gcgggagagtcagagagcaacctaagaaaggcgtttgaggaggcacagaaaaatgctcca
gccatcatttttattgatgagctggatgccatcgctcccaagagagagaaggtgaacggt
gaagtggagaggcgtatagtctcccagctcctgaccctgatggatggcctgaagcaaaga
gctcatgtagttgtcatggcagccacaaacnccccaaacagtgtggaccctgctctaaga
cgctttggcaggtttgaccgggagattgacattggaatccctgatttgaccggcagactg
gagatcatgcagatccacaccaaaaacatgaaactggccggagacatcgacctggagagg
attgccaaagagacccacggtcatgtgggcgccgacttggctgctctctgctcagaagct
gctctgcaagccatccgcaagaagatgatccttatagacctggaggacgaatccattgat
gctgacctgctcaactcactggctgtcaccatggatgacttccaatgggcgctgagtcag
agcaacccatcagctttgagagagactgttgcagaggtgcctcaggtgaactgggaggat
gtcggtggactggaccaggtcaagagagaactgcaagaactcgttcagtaccctgtcgag
tatccggacaagttcctgaagtttggtatgactccatctcgcggcgtgttgttctacggc
cctccgggctgtgggaaaaccctgctggctaaggccattgccaatgagtgccaagccaac
tttatttctatcaaaggacccgagatgctgaccatgtggtttggagaatcggaagccaat
gtcagagatgtgtttgataaggccagacaggcagccccttgcatcttgtttttcgacgag
ttagactccattgccaaatctagaggaggcggaggtggggatggaagtggtgcagctgac
agagtcatcaatcagatactaacagagatggacggcatgtcagacaaaaagaatgtcttc
attattggtgccacaaacagaccagacatcatagactctgccatcctgcggccgggccgt
ttggaccagctcatctacatcccactcccagacaaaccatctcgcactgcaatcctaaat
gccaacctccgcaagtcccctgtcgcacgagatgttgatctggactacctgtctgacatc
acagatggtttctccggagctgacctgacagagatctgccagcgggcttgtaaaatggcc
atacgcgaggccatcgaggccgagatcaaggctgagcgtcagaggcaaaccaggccaggc
atccccatggatgaggactttgatccagtccccgagatcaggaaggaccactttgaagag
gcaatgcgctttgctcgtcgctctgtcagtgacagtgacatccgcaaatatgaaatgttt
gcccaaactctgcagcagagccgaggttttggaaacttcaggttcccctctgctactggt
acccggtctggaggtcaggggtcaggctctgggtcagaaaggccaggcgagtacagagag
gaaagcaatgacgatctctatcagtga
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