Etheostoma spectabile (orangethroat darter): 116700446
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Entry
116700446 CDS
T08457
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116700446 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116700446 (rnf43)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116700446 (rnf43)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116700446 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
PA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
116700446
NCBI-ProteinID:
XP_032389563
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All DBs
Position
13:complement(4884222..4979303)
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AA seq
818 aa
AA seq
DB search
MIVPQRRLAGLWPWLLMAALQVVLGQPGLESERPALRAVIKVALLNHELTGKTITLQGLF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDSLPRPVVLVEAEDAEELMGLVNKNEEAKVRIEIMGEQP
TWPHYDVGILLTIVLAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAISRLETKTYSSQGC
SGSQHHQAPWGSGSSSNSSPVCAICLEDFQDGQHLRIISCAHEFHKECVDPWLLQHRTCP
LCMHNIMGTERQPQRNRLQQSVEQSQSFLHSQPYSSPRNHPFPQHAIPFSMRPHYPRGPS
GHYPTLGHYTSSSPMDAQTLRFLTSRPLASGCGYHLPAEGPGRPHRIGGNCRTSTHHYAS
RRPCHNYRSSCPAQRSASSSRLQHTASVTQQPRGAPAHSRQDDASCSGGSYHTERSGYLA
DGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGRAP
RRNSLEADAQARPRSLDSVVNKAGCPEEQPQTVFSHIHFHRHRHHHYEEGEHSQGPSRGS
DEEQGGAAAAAAAPAPLVLDKDLPVCPPKHSPCQCPKPDPTDRPSPGTECQDHDLNSPAG
PPVSCLVPLQLQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLQDDRSIHIHYGQ
GPGFCCSPPELHPALLPVPLILDSGGMEDWPCYAGAHVVWQKRVQQARSEPQLLGPGTSM
DRPPCRFQHGPGADRNTDICLYCQTLHYNQGSEEESGV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggccctccgagctgtcatc
aaggtggcactgctgaatcatgagctgacggggaagaccatcaccttgcaagggttgttc
gtgggaggaagtgccggctacgcggagggaaaactcatgcagtatcaccctctgtctctg
tgcaacacaagcgaggatgaacgacaagagagtgacttcatcaccattgtcaaactggag
cacagggtaccccgctgtctgccgctgctcgataaggctcgcatggcattggacaaagga
gctcaggctgttatcttcgatgtcagtgacgatgccaacgctgctgctgagctgcgagaa
accgactcccttccccgtccagtcgtgctggtggaggcggaggatgctgaggagctgatg
ggtttggtcaacaagaacgaagaggccaaagttcgtattgagatcatgggggagcagcct
acatggccacattacgatgtggggatcctgctcaccattgtcctagctattctgaccatc
gtcctgatatttgctttccgctacaagtgcaagtccaacaggacctgggactccgtccat
cagcagaccatgcgggccattagtcgattggagaccaaaacctacagctcccagggctgc
tcgggctctcagcaccaccaggcaccctgggggtcgggcagcagctccaactcgagccct
gtatgtgctatctgcctggaggacttccaggacggccagcatttgaggatcatctcctgc
gctcatgagttccacaaagagtgcgtcgacccctggctgctacaacaccgcacctgtccc
ctctgtatgcacaacatcatggggacggagcggcagccccagaggaacagactccagcag
agtgtggagcaaagccagagtttccttcactctcagccttacagcagcccacgcaaccac
cccttcccccagcacgccatccccttctccatgaggccccactatcctcgtggaccctct
ggacattatcccaccctgggccactacaccagctcttctcccatggatgcccaaacacta
cgtttcctaaccagcaggccgcttgcgtccggctgtgggtaccaccttcctgcagaaggc
ccagggaggccccacaggattggaggtaactgcaggacttccacccaccactacgcatca
cgtcggccctgccacaactataggtcatcctgtccggcccagcgcagcgcatccagctca
agactgcagcacacggcctccgtcacacaacagccgcgtggagcgccggcccacagccgg
caggacgacgccagctgctcgggtggcagctaccacacggaacgcagcgggtacttggcc
gatgggcccgccagtgactccagctcaggaccatgccacggctcctccagcgactcagtt
ctcaattgtactgacgtgtccctgcagggggtttatggcagctggtccaccttccgtagc
tctctgagcagtgattatgatccgtttgtgtattacgggccagggcctgggcgcgcccct
cgcaggaacagcctggaggccgatgcccaggcccggcccaggtctctggattctgtggtg
aacaaagcaggctgccccgaggagcagccgcagactgtgtttagccacatccacttccac
cgccacagacaccaccactatgaggagggggagcacagccagggcccgagcagaggctcg
gacgaggagcaggggggcgctgctgctgctgctgcggcacctgctcctctagtcctggac
aaagacttgcctgtctgccctcctaagcacagcccctgccagtgcccaaagccagacccc
acagatcggccaagtcctgggactgagtgtcaggaccatgacctcaacagccctgcagga
cctcctgtttcctgtctggtcccattacagcttcaaccccactgctgccatcaggggcac
ggacaccctcccgctcctcttgggcgagtgggtggctgtgtgcttgatgggccctccgtc
cgcttccaccagagcctagatctgcaggacgaccgtagcatccacatccactacggccag
ggcccgggtttctgctgctcccctccggagctgcaccctgccttgctccccgtgcccctc
atcctggactctggaggtatggaggactggccttgctatgccggggcccatgttgtgtgg
caaaagcgggtgcagcaggcccgctcagagcctcagctcttggggcccgggacctctatg
gacaggccaccctgcaggttccagcacggccctggtgccgaccgcaacacagacatttgt
ttgtactgccaaacactacactacaatcagggatcagaagaggagtctggcgtgtga
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