Etheostoma spectabile (orangethroat darter): 116700472
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Entry
116700472 CDS
T08457
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116700472 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116700472 (exosc8)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116700472 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
NYN_YacP
Motif
Other DBs
NCBI-GeneID:
116700472
NCBI-ProteinID:
XP_032389608
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All DBs
Position
13:22532201..22535212
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AA seq
277 aa
AA seq
DB search
MAAGFKIAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSITTADGSALVKVGNTTVIC
GIKAELTNPTGEAPGKGYIVPNVDLPPLCSSRFRPGPPAEQAQTASQFIADVIESSEVIQ
TQDLCIERGKLCWVLYCDIMCLDYDGNVLDACIIALLAALKNTQLPEVTISTETSKPEVN
LEKKHGLQIHKHPVGASFCVFDDSILIVDPTAEEESLSTAHLTVVTDDEDRLCVVHKPGG
TSLSGEKLQECISRATARQREIQKLIDKVIHSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagattgctgagcctctggagtatcacaggagctttctgaaagaa
aactgtcgaccggatggacgggagctgtcagaattcagaaccacaacactaaacataggg
tccataaccacagccgatggctccgccctggtgaaggttggaaacacaacagtcatctgt
gggatcaaagcggagctgacaaaccctacaggggaggcacctggtaaaggttacatcgtg
cccaatgtggacctgccgccgctgtgttcctcccggtttcggccgggtcccccggcagag
caggcacagactgccagccagttcatcgctgatgtaatcgaaagctctgaggtgatacaa
acgcaggacttgtgcattgaaagaggaaagctctgctgggtgctctactgtgacatcatg
tgtctcgactacgatgggaacgtgttggatgcttgtatcattgccctgctggctgccctg
aaaaacacgcagctcccagaggtcactatcagcacagagactagtaaaccagaagtgaat
ttagaaaagaaacatgggctgcaaattcacaaacatccagttggtgcctctttttgtgtc
ttcgatgactccatactgattgtagacccgacagctgaggaggagagtctgtcgaccgct
cacctcactgtagtgacagacgatgaagatcgactctgcgttgtacacaaaccaggtggg
acgtcactgtcgggagaaaagctgcaggagtgtatcagcagagcaaccgcacgacagaga
gaaatccagaaactaattgacaaagtcatacacagtgtaaagaccgcacaataa
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