Etheostoma spectabile (orangethroat darter): 116700496
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Entry
116700496 CDS
T08457
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116700496 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
116700496 (thsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
116700496
NCBI-ProteinID:
XP_032389651
LinkDB
All DBs
Position
13:complement(23463350..23471033)
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AA seq
946 aa
AA seq
DB search
MPQAVSLLPYMLALMGYAFAGLNIWPSFHVALSNASVFVEFSTRSNSSIRNTSLSLVNTE
TNTTLLTRTLPYNQWGGSVEFNCTCFLYAGTFRFLLRQTSISAFSRANGTHDSNTESTTW
WWSSELRVQWPTFHIAVDRAGNHSGSFQVGISTNEHFQACSSGIDSALFLEVSYMEYNQI
GQNSIDKVQARTRHPIKPLRSQSVELSCAFPFTERDFIRVALRSPHSVQDVKSSGPLYLS
RIFSYKLLVENTHVYRSACEGTMTVKLITPPCANINGKVMLYKDAGVGRGVAVSSGMEAG
GTAVMEFGPDEPSSPLLAFNWLTQGENETEFNCSVFYPGRNKYCFRFVFNFSRSPSPAQT
CLVVHRSAESWGPWLPWSVCSVSCGEGVRERVRECLLPSGVGGMQCTGMVKEQSLCSLED
CVVLPSPSLPPVAVRVVPIGGNMIVVAGISLCLAVILATVVVTLWRKLCKTPQCSSVHRG
SMHSPGGRKLSDEASICGHSLQRPSLSDGHSPPGGMGVAQKDRPFLGPQPLSQSLVIPLS
QDPGRLSPTGQKMLPPIFGYRLAQQQLKEMKKKGLKEATQLYHVSSSPVHDTVVETSASP
TNSPIPAPTGFAHLTLPLGLQDDANHNHFSIAEPPAQTSRVTPDRLSPRVELVLGPSVSA
HASGGSSKWRDRTADWVEMVERSGLAGFRGGGDAGMENSYHKNPNFRRTSSFNDTTPQPL
SSVHSRQFRERSMTQVGSRTLPEGSCWNKAGRERQPYSSYPIPEYGAPGWAISRPQRNDQ
RKPWIEKAAPSHNNELKHTGTNTNSMSASEKHAKANLSGTGDRQRSNETGGVEGISGIGG
PATGPASLSVDRAQRAEQNWNRRGPSPIQRNILARKLKEAQSCSGVKGRQRSSTFSVSHL
EQRKGLCHSLPMSGGCSSSGGSPYRLSEAEQRMLDLDLSAYVGEEE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagctgtctccctgctgccctacatgctggcgctcatgggatatgcttttgca
gggctcaatatctggccctccttccacgttgctcttagcaacgccagtgtatttgtggaa
ttcagcactagatccaacagcagcatccgcaacacaagcctctctctggtcaatacggaa
accaacaccacccttctcacaaggactctcccctacaaccaatggggcggtagtgtggag
ttcaactgtacttgcttcctgtatgcaggaactttccggtttctgctgcggcagaccagc
atctctgctttttctcgtgctaatggcacccacgacagtaacacagaaagcactacctgg
tggtggagttcagaactgcgggtgcagtggcccacctttcacatcgctgtggacagggct
ggaaaccattcaggatcttttcaggttgggatatccactaatgaacactttcaggcttgc
tccagcggcattgactcggctctcttcctagaagtcagctacatggagtacaaccagata
gggcaaaacagcatcgacaaggtccaagcccgcacccgacacccaatcaaacccctccgt
tcccagagtgttgagctgtcctgtgctttccccttcacagaaagagacttcatacgagtg
gctctacggtctcctcactcagtacaggatgtgaagagctctggacctctctacctctcc
cgtatcttctcctataagctgctggtggaaaacacacatgtttacaggagtgcttgtgaa
gggactatgactgttaaactgataaccccaccttgtgctaacatcaatggcaaagtaatg
ctgtataaggatgcgggtgttggaagaggggttgctgtttcctctgggatggaagcaggt
ggaacagcagtgatggagtttggaccagatgagccctcttcacctctgttggcctttaac
tggctgactcagggagagaatgagacagaattcaactgttctgtgttttacccagggagg
aataagtactgctttcgctttgttttcaacttcagtcgctcccctagtccagcacagacc
tgtttggtggttcacaggagtgcagagtcatggggcccatggctgccgtggagtgtgtgc
agtgtcagctgtggagagggagtgagggaacgagtgcgtgagtgtttgctgccctcaggt
gtgggagggatgcagtgcaccggcatggtgaaggaacagtctctctgctcactagaggat
tgtgtcgtgttgccttctccatccctcccccctgtggctgtgagagttgtgcccattggt
ggtaacatgattgtggtggctggtatctccctttgcctcgctgtgattctggctactgtt
gtggtgactttgtggagaaagctttgcaagacacctcagtgcagctctgtccacagaggc
tccatgcattcccctggaggacgcaagctttccgatgaggcatccatttgtggccacagc
ctccaaagacccagcctgtctgacggccacagccccccaggtggcatgggtgtagcccag
aaagacagacctttcctgggccctcagcctctctcacagagcctggtgatacctctctca
caggacccaggaagactgtcccccacaggtcaaaagatgttgccaccaatatttgggtac
cgattggctcagcagcagttgaaagaaatgaagaagaaggggttaaaggaggcaacacag
ctgtaccatgtctcttcaagcccagttcacgacactgtggtggagacatcagcttccccc
acaaactcccccatccctgcaccaactggatttgctcatctcacacttcctttgggcctc
caggacgatgctaaccacaatcattttagtattgcagagcctccagcgcagacttctagg
gtcacgccggacagactgagtcccagagtggagctggtcttaggtccttctgtctctgct
catgctagtgggggcagttcgaaatggcgggaccgcactgctgactgggtggagatggta
gagaggagtgggttagcaggtttcagaggaggaggagatgcagggatggaaaactcctat
cataagaatccaaatttccgcaggacttccagttttaatgacaccacaccccagcctcta
tcctctgtacactccagacagttcagagaaaggagcatgacccaggtgggatctcggacc
cttcctgaaggaagttgttggaataaagcaggacgggagagacagccatacagctcgtac
cccattccagaatatggggccccagggtgggctatatccagaccacagagaaatgaccag
aggaagccttggatagagaaagctgctccttctcacaacaatgaactcaaacacacagga
accaacacaaacagcatgtcagcatctgagaaacatgctaaagcaaacctcagtggcact
ggggacaggcaaaggagtaatgagacaggaggtgttgagggaatctcagggattggaggg
ccagccacggggcctgccagcctgagtgtggatcgcgcacagcgagctgagcagaactgg
aaccgtcgcggcccatcgcctattcagaggaacatcctggcccggaaattaaaagaggct
cagtcgtgctctggggtcaaagggcggcagcgcagctccacctttagcgtatcgcacctg
gaacagaggaaaggtctctgccactctctgccaatgtctggaggctgcagcagcagtggg
ggctcaccctacaggctgagtgaggcagagcagaggatgttggacctagacctgtcagca
tatgtaggggaagaggagtag
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