Etheostoma spectabile (orangethroat darter): 116700519
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Entry
116700519 CDS
T08457
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116700519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116700519
03036 Chromosome and associated proteins [BR:
esp03036
]
116700519
Spliceosome [BR:
esp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116700519
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116700519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
Lar_restr_allev
PHD_2
Motif
Other DBs
NCBI-GeneID:
116700519
NCBI-ProteinID:
XP_032389690
LinkDB
All DBs
Position
13:26171392..26181927
Genome browser
AA seq
413 aa
AA seq
DB search
MAAVVENVVKLLGEQYYRDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKK
HRGPGMAPGQLYTYPSRRWRKKRRSLPQEDPRLIIPPVKSEVDVGLKKDALLSADGSSLE
ALLKGESLEKRTITELRGSEEDSNQSDYTGGLNPAARIRKRVLEPDDFLDDLDDEDYDED
TPKRRGKGKGKGRGAGSNRKKLDTAALEDRDKPYACDNTIKQKHISKPSERVCGKRYKNR
PGLSYHYAHSHLAEEEGEEKEEMENNEPALSLPDEPKTPKKGPDGLALPNNYCDFCLGDS
KTNHKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDD
QLLFCDDCDRGYHMYCLNPPMAEPPEGSWSCHLCLDLLKDKASIYQNQNAPPS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttgttgagaatgttgtcaaactgttgggagagcagtactacagagatgcc
atggaacaatgtcacaactacaatgccaggctctgtgctgagaggagcgtccggatgcca
ttcctcgactctcagaccggtgtggctcaaagcaactgctacatttggatggaaaagaaa
cacaggggaccaggcatggctccagggcagctctacacctacccatccaggaggtggagg
aagaaacgacgatctcttcctcaggaggacccccggctcatcatcccacctgtcaagtca
gaggtggatgtaggcctaaagaaggatgctctgttatcagcggatggcagcagcctggag
gccctgctgaagggggagtccttggaaaaacggacgatcacagagctccgaggctccgag
gaggattcaaaccagagtgactacaccggaggcctgaaccctgctgctaggattagaaag
agagtccttgagccggatgacttcctggatgacctggatgatgaagactacgatgaagac
acgcctaaaagaagaggcaagggaaaggggaagggccgaggagcaggcagtaatagaaag
aagctggacacagcagccctggaggaccgagacaagccctacgcctgtgacaacactatc
aaacaaaagcatatttcaaaaccttctgaaagagtctgtgggaagcgttacaagaaccgt
cccggcctgagctaccactacgcccactcccacctggctgaggaggagggtgaggagaaa
gaagagatggagaacaatgagcctgccctgtcgctgcctgatgagcctaaaactcccaag
aaaggcccagatggtctcgcattgcctaataattactgtgatttctgcctgggagactct
aaaaccaatcacaagacaggccagtcagaagagctggtgtcctgctccgactgcggacgc
tcaggccacccttcctgcctgcagttcactcctgtaatgatggctgctgtgaagacgtac
cgctggcagtgcatagagtgcaagtgctgcaacatatgcggcacctccgagaatgacgac
cagcttctgttctgtgacgactgtgatagaggctatcacatgtattgtctcaacccaccc
atggctgaacctccagaggggagctggagctgtcatctatgtctggaccttttgaaagac
aaggcatcaatataccagaaccagaacgccccaccatcgtga
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