Etheostoma spectabile (orangethroat darter): 116700520
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Entry
116700520 CDS
T08457
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116700520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116700520
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116700520
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
116700520
NCBI-ProteinID:
XP_032389692
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Position
13:4539151..4555714
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AA seq
782 aa
AA seq
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MEKSEMFGFSLETDDRTEEEKMRQKAPKKGGVASALGLGQELPKAPMDTDYQEEMEKTKP
QIRFNLNFDKGIRGEQQPSQKRDSKTFNIDRLFEAVASRDVRKLDGLHQYLTQNMKKLSD
SLYQSYGKTALMKALLHLRDGENKTVELLIDISEKMGDVKEFVNAAYTNSYYKGQTALHI
AIERRSCSYVKLLISKGADVHAKACGIFFQPHDGPNFYFGELPLSLAACTNQPDMVDFLM
DNSYQRADXXXXDSKGNTVLHALVVVADNTEDNTKFITKMYDRILKTTARLHPMLKLEDI
ENRNGLTPLKMAAKTGKIGLFSHILKREFQESDTKHLSRKFTEWVYGPVHSSLYDLASVD
SFEENSVMEILVYGSDIPNRHEMLQLEPLSQILEEKWKTFAGRMFFFNYLVYLLYLIIFT
VVAYYRKGGELPFPVKPTPVGYLYVSGQLVTMLANCYFFLIGIIDMKRKRPKLQTLLIDG
YYEILFLVQGALFLASAGLYLSGRREYLGLLVLCLALSWVNMLYFSRGAKHMGIYSIMIQ
KMILSDILRFLFVYIVFLLGFSAAVVTLLMEPPDNRGRAGLLTTAAPGSKCLKPYFRSIS
FTILELFKFTIGMGDMEFTEYYEYKEVFYVLLIGYIILTYILLLNMLIALMNRTVERITT
ESTCIWKLQRAITILDMEKRLSCCLRKRFRCGVEKNIHTALGDDRRRCFRVEEVNWNKWN
SNLGKINEDPGCWDRDQQTASNTLPDRPSRGRSWRGLFLDGSRPWRQTYEATEMSPLGAS
PV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcagagatgttcggcttctctctggagacagacgacaggacggaggaggaa
aaaatgcggcagaaagcgccgaagaagggcggtgtggcttcggccctgggtttgggccag
gagctgcccaaggctcccatggacaccgattaccaggaggaaatggagaagaccaagccg
caaatcagattcaatctcaactttgacaaagggattcgaggtgagcagcagcccagccag
aagagagacagcaagacgtttaacatcgataggttgtttgaagccgtggccagccgggac
gtcagaaagctggatggcctgcatcagtacctgacccagaacatgaagaaactctcggac
tctctgtatcagtcctatggtaaaactgccctgatgaaggctctgctgcacctcagggac
ggcgagaacaagacggtggaactattaattgacatttcagagaagatgggcgacgttaaa
gagtttgtgaatgcagcctacaccaacagctactacaaaggccagaccgctctccatata
gccattgagaggaggagctgttcctacgtgaagctgctgatcagtaaaggagcagatgtc
catgccaaagcctgcggaatattcttccagccgcatgatggccccaacttctactttggt
gagctgcctctgtctctggcagcctgcaccaaccagcccgacatggtggacttcctcatg
gacaacagttaccaacgagcggacgnnnnnnnnnnggactctaaaggcaacacagtgctg
cacgccctggtggtggtggctgacaacactgaggataacacaaagttcattaccaaaatg
tacgaccgcatcctcaaaaccaccgccaggctgcaccccatgctgaagctggaggacatt
gagaaccgcaacgggctgacgcctctcaaaatggctgccaagactggcaagattgggctt
ttttcacacatcctaaaacgggagttccaagagagtgacaccaaacatttgtcccgtaaa
ttcactgagtgggtttacgggcccgtccacagctccctgtacgacctggcctctgtggac
tcgtttgaggaaaactccgtcatggagatcctggtctacggcagtgacattcctaaccgc
cacgagatgctccagttggagcctctgagccagattctggaggagaagtggaagacgttt
gctggccgaatgtttttttttaactacctagtctacctcctgtatctgatcatcttcact
gtggtcgcctactatagaaagggcggagagctgccgtttcccgtcaaaccaaccccagtg
ggttacctgtatgtctcaggccagctagtgacaatgctggctaactgctatttctttctc
attgggatcatagacatgaagaggaagcgcccgaagctgcagacgttgctgattgatgga
tattatgagattctttttcttgtgcagggcgccctgttcctggcctccgccgggctgtac
ctgtccgggcggcgggagtacctgggcctgctggtgctgtgtcttgctctcagctgggtg
aacatgctctacttctccagaggggccaaacacatgggcatctacagcatcatgatacag
aagatgatcctcagtgatatcctgcgctttctttttgtctacatcgtcttcctcttggga
ttttcagcagcggtggtcacgttgctcatggagcctcctgacaatagggggcgagccggt
ttgttaaccaccgctgcccctggttcgaagtgcttaaagccctacttcagaagcatctcc
ttcaccattctggagctctttaagttcaccatcggcatgggcgacatggagttcactgag
tactacgagtacaaggaggtgttctacgtgctcctcatcggctacatcatcctcacctac
atcctgctgctcaacatgctcatcgccctcatgaaccgcaccgtggagaggatcaccacg
gagagcacctgcatttggaagctacagagggctatcaccatcctggatatggagaaaagg
ctgtcttgctgtctgaggaagaggtttcgctgcggggtggagaagaacatccacactgct
cttggagatgaccggcgccggtgtttcagagtggaggaagtcaactggaacaaatggaac
agcaacctgggcaaaatcaatgaggatcccgggtgctgggatcgggaccaacagaccgcc
tcgaacactctgccggacagaccaagcagagggaggagctggagaggtttgttcctggat
ggcagcaggccgtggaggcagacgtacgaggccacagagatgagtcctctgggcgcctcg
ccggtctaa
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