Etheostoma spectabile (orangethroat darter): 116700543
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Entry
116700543 CDS
T08457
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116700543 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116700543 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116700543 (ncor1)
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116700543 (ncor1)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
116700543 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
116700543
NCBI-ProteinID:
XP_032389722
LinkDB
All DBs
Position
13:4339704..4397960
Genome browser
AA seq
2413 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPPHSVQYTFTGTRHQQDFAIPDYRNHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSISSQSEHEALDSKRPRMETVAEAHITRTPPTAGGLVL
PMNHTGQDSLRATVDLKKESQYNVKLESPSSVGPTLHLGEEQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLLDDP
MKVYKARQFMNVWTEHEKEIFKEKFIQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEDKSDDKNEEDKAEKSDKKEEEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPPA
PEPALPDPPQLPKSDPMQKSMKEPTKPQTPVVSMDANKAGAGETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGDG
NATVSPDDDDEDDDEDDDNADDSEGGDNSSDTESAPSPSQSADSKRTDRTAGDAHCSDQD
KGQASNGKPLEPLYGGLCVKEEKSPESETGSQEEKARMTSYVGSVHPKTEPQDVDMKTGE
VQVKMEPELKERGEKGDHGERHREINSDNDSSATCSADEDVDAEPERQRMFAMERPTLLN
PPGSVLVSSPKQTQLNIQQMQHRAANIPPMVHGPFGPGGVPISGFAMLQHQIKAVHESAH
QEEKQRQDQGDLERRAPFNTRSPTVIDRDGKPLPYMPYDMKLALDQEVHSGRPGSPYRLS
PRELSKASPQPDPNAPNASRYSVPPVLHPAPNQLVQSMADGVRVTFSRPSRPPNIPSPPP
LIPTAKPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSNVGSISLGLPRQQDPNKPG
AAVPSIQDGRGNPAKMGEGLTMRGSITQGTPALPQSSIAADLLKGTITKLATEDLSSQDK
ARGEQLSKGHVIYEGKSGHILSYDAIKNPRENTRSPRSGLELKRTYDMMEGPMSRGHPGR
EGAPFEGLISRALPREGLHGDSKERPLITGSIMQGTPRTAAETYEDAMKYGKQIKLESPP
IRSFEGGIGKGKPYEGVNTIKEMGRSIHEIPRQEQSGQDICKTPELSDRRVIEGMSQIHP
LNQSTIKHNVKSLITSPSKHPHSMPQLEAMERAKYEESKAVRHTVVNSTGSVLRSTHQEG
GKSQLSPSMYEDANARRTPVNYSTNPVSRGSPMLGRTPEGVGSSAKSAAHERKSAMTPTQ
RDSVPAKSPVSGGDPVGSHSPFDPHHRPVGPGEVYRAHLPPHLDPTMAFHRVLDPAFMFP
RQPSPTGYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQPVAMPYAAGA
RGIIDLAQMPPTILLPHPGGTGTPTLERIAYLPGAQPPFPLRAFNPTSISPGHQAHLAAA
AAASAERERDREQQEKEREQRDREREIREMRERERTNEYIRGGVPEQPGRPGSRGYLHSP
SPSLRTQQDVVVQQQQQQQQQQRPSIFQGKSVITSLMPHTAAATAAAQSSSRYSTAADAL
AALVDAAASAPQMDVAKVKENKHEREDDMSTSAAARRAASISEQHEAERRSMQSPYGAMS
LPGGKPHPGYSEGPGLSIKDKGHPTSKSRIEEELRTRGKTTITAANFIDVIITRQIASDK
DSRERGSQSSDSSSSLSSSRYDNTGGGAIEVISPASSPVQPQQDKPEEGQQQAAAAGMRP
YDISRYRPSGEPPQPSPQQPPSSQIDSYSQVPKTHRVMTLADHISHIITQDFARNQDPPP
VSSSATFQSVMPPVSSSGRAKVSSRYSPENQVQAPHHQRSSSRVSPENAPDKPRARPGKS
PERGGRQMENYEPISPPQSYQGVDKQEMVGPPPQRREADNSELRTDSRSPGSVSYLPSFF
TKLENTSPMVKSKKQEIFRKLNSNSGAGDSDVGNAQPGTEIFNLPAVTSSSSINTRNHSF
SDPASNLGLEDIIRKALMGNLEEKPEEHQGGLGAQGAINNTPCTGSEARQEANRSPSMGK
QKPGKANSRKSKSPNLGQSYTGGERPSSVSSVHSEGDYHRQAQTQPQWSWDDRPSSTGSM
QFPYNPLTMRILSSTPPTSIASPSIQSQQQKQQQQQQQQQQPPPPPTGAPVAQQRVWQSL
LSEQYETLSDSDD
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggttacccgcccagccagggcagcttcagcagtgagcagagccgg
tacccaccacattctgtccagtacaccttcactggcacacgccaccaacaggatttcgcc
atcccagactatcgaaatcacatgcaagatccacagggtcggagaagaccatctttactg
tctgaattccaccctggaacggaaaggcctccagagagacgccatggttacgaacagcag
tttcactccatctcatcccagtctgagcatgaggctttggattctaaacgccctcgcatg
gagactgtggctgaggcccacatcacccgcacgcctcccactgctgggggtcttgtcctg
cccatgaaccatacaggacaggacagtctaagagccactgtggacttaaaaaaggaatct
caatataatgtcaaactggagtccccgtcctcagtaggtcctacactacacttgggtgag
gagcaggatgcctctccttccaaactatccaaggaggagctgatccagagtatggaccgt
gtagaccgggagattgctaaagttgagcagcagatcttcaagctgaagaagaagcagcaa
caactggaggaggaagcggcaaagccagtggagccagaaaagccagtgacccctccccca
gtggagcacaagcatcgcagcatagtccagatcatctacgatgagaacaggaaaaaagct
gaagaggcccataaaatactagaaggtcttggtcctaaggttgagctgccgctctacaat
cagccctcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgaggaag
aagctcattttgttttttaagaggaggaaccacgctcgaaaacaaagggaacagaagatc
tgccagcgctacgaccagctgatggaagcgtgggaaaaaaaggtggagcgaatggagaac
aaccccagacgcaaagccaaggagagcagaacacgggagtactatgagaggcagttccct
gagatccgcaagcagagagagcagcaggagcgcttccagagggttggacaaagaggaacg
ggcctttctgcaacaatagcaagaagcgagcatgagatttctgaaatcatagatggtctt
tctgaacaggagaacaatgaaaaacagatgagacagctgtcagtcatccctcccatgatg
tacgactctgagcagcggcgagtgaagtttatcaacatgaacggcctgttggatgaccca
atgaaggtgtacaaagccaggcagttcatgaatgtttggaccgaacacgaaaaagagatc
tttaaggagaagtttatccaacaccccaagaactttggccttattgcctcctatctggag
agaaagtgtgtcgctgactgtgtcctttactactacctgaccaagaagaaccataactac
aagacgctggtgaggcgaaactatggaagacggagaggaaggaaccagcaaataacacgt
ccctcacaagaagacaagtcagacgacaaaaacgaagaggacaaagctgagaaatctgac
aaaaaagaggaagaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaatagccagggccgccgtaagggaaggatcacc
acacgctccatggccaatgaggctgcatctgtggcggctgaggaggcccctccccctgcc
cctgagcctgccttgccagatcctccgcagctccctaagtctgatccaatgcagaagtcc
atgaaggagcctacaaaaccccagactccagtagtttccatggatgctaataaagcgggt
gctggtgaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaa
gggctagttgagcatgggcggaactggacagccattgccaaaatggtgggcaccaaaagt
gaggcacagtgcaagaatttctatttcaattacaagagacgtcacaacctggacaacctg
ctccagcagcataagcaggacacacggcgggctcgtgctgataggtctcaaggtgacggt
aatgccacagtgtcacctgatgatgatgacgaagatgatgacgaagatgatgacaacgca
gatgacagtgaaggcggtgacaacagctcagatacagagagtgctccctccccctctcag
tctgccgactccaagagaacagaccgcactgcaggagatgctcattgctctgaccaggac
aaaggtcaggccagtaatggaaagcccctggagcccttatacggaggactctgtgtcaag
gaagagaaaagcccagagagtgagactggatctcaggaggaaaaagccaggatgacttcc
tatgtaggctcagtgcatcccaaaactgaaccgcaggatgttgacatgaagaccggagag
gttcaggtcaagatggagcctgagcttaaggagagaggagaaaagggagatcacggtgag
aggcatagggagatcaactcagataatgactccagcgccacctgcagtgctgacgaggat
gtggacgcagagcctgaaagacagagaatgttcgccatggaaaggcctacactgctcaac
cctccaggctcagtgctggtgtcctcacccaagcaaacccaactcaacatccagcagatg
cagcatcgggcagctaacatcccacctatggtgcacggtccctttggccccggtggtgtg
cccatcagtggctttgccatgttgcaacaccagatcaaagcagtgcacgagtcggcacac
caagaggagaagcagaggcaggatcagggagacctggagcgcagagcgcccttcaacacc
cgcagccccaccgtaatagacagagatggtaagcccctaccctacatgccttatgacatg
aagctggctctggaccaggaggtccattctggccggccaggctctccctacagactctcc
cctagggagctgagcaaggcctcaccccaacctgaccccaacgcccccaatgcctcccgc
tacagtgtgccaccagtcctccaccctgcccccaaccagcttgtccagagtatggcagat
ggagtccgcgtcacattcagcagacccagtcgacctcccaacattccctctcctcctcca
ctcattccaaccgccaagcccacggacaagccctccttcatccaaggaggctccatctcc
cagggaactcctggaacatatctgccatcccatgctgtctatgggccagaggggactaag
agcaatgtgggctccatctctctgggtctgcctcggcagcaggatcctaacaagcctgga
gctgcagttccatccatacaggacggcagaggcaacccagcaaagatgggtgagggtctg
actatgagaggatccatcactcagggcacacctgctctgccccagtccagcattgctgct
gacctcctgaagggcacaattacaaagttagccacagaggacctaagcagccaagacaag
gcaaggggtgaacagctgtctaagggtcatgtcatctatgaaggcaagagtggtcacatc
ctctcctatgatgccatcaagaaccccagggaaaacacccgcagccccagatcaggcctt
gagctgaaacgcacgtacgacatgatggagggacccatgagcaggggacaccctggcagg
gaaggagctccattcgaggggttgattagcagagccttgcccagagaaggtctacacgga
gattctaaggaaagaccattgatcacaggatccattatgcaaggaacacctagaaccgca
gcagagacttatgaagatgccatgaaatatggaaaacaaataaagctagagagcccacca
atccgctcctttgaagggggtattggcaaaggcaagccctacgagggagtcaatactatc
aaagagatgggacgctccattcatgaaatccccagacaagaacagtctggtcaggacatc
tgcaagacccctgaactgtcggacaggagggttattgagggcatgtctcagattcaccct
ctcaaccagtctactatcaagcacaacgtcaagtccctcatcaccagtccgtctaagcat
ccccacagcatgcctcagctcgaggccatggaacgagccaaatacgaggagagcaaggca
gtacgccacactgtggtcaactccaccggctccgtcctgcgctccacacaccaggaaggc
ggcaaatcccagcttagcccaagcatgtatgaggacgccaacgctcgcaggacccctgtt
aactacagcaccaatcccgtctccagaggatcacccatgttgggacgcacaccagagggt
gttgggagctctgcaaaatctgctgcacatgaaagaaagagtgccatgaccccgacacag
agggacagtgtcccagccaagtccccagtgtcaggtggtgaccctgtaggctctcacagc
ccatttgacccccaccaccggcctgttggtcctggggaagtttacagagcccacctgcct
ccacatcttgaccccaccatggcctttcacagagtgctggatcctgcattcatgttcccc
aggcagccatctccaacaggctaccacaacacctaccagctgtacaccatggagaacacg
cggcagacaatcctcaacgattatatcacttcccagcagatgcaagtcattcgacctgac
atggcccgagggttgtcaccacgagaacagcccgtcgctatgccttacgcagccggagct
cgagggattattgatctagcccagatgcctccaactatcctgttgcctcaccctggggga
acaggtactcccactttggaacgcatcgcctacctccctggagctcagccccctttccct
cttagggctttcaacccaacctccatatcgccaggccaccaagcccaccttgctgctgca
gccgctgccagtgcagagagggagcgtgaccgggaacagcaggagaaagagagggagcag
agggaccgggagcgagaaattcgagaaatgcgagagcgggagagaaccaacgaatacatc
cgcggaggtgtaccagagcagccaggccggccagggagtcgaggttatctgcattcccct
tctccctcactcaggacacagcaggatgtagtggtccagcagcagcagcagcagcagcag
cagcagcggcctagcatcttccagggcaagagtgtcatcacctcactaatgccccataca
gcagcagcgacagcagcagcacagagtagctctcgctacagtactgcagctgatgctctg
gctgctctggtggatgctgcagcctctgccccgcagatggacgtggccaaggtgaaggaa
aacaaacatgagcgggaggacgacatgtctacctcggccgcagctcggcgagcagccagc
atctccgaacagcacgaggcagagaggcggtccatgcagtcaccctatggtgctatgtct
ctgcctggaggtaaaccccatccaggttactctgagggccctggactttccattaaggat
aagggccatccgacctcaaagtctcgcatcgaagaggagcttcggactcgaggaaagaca
actatcacagctgctaacttcatcgatgtcatcatcacacggcagatagcctcggacaaa
gactcacgagagcgaggctctcagagctctgactcgtccagcagcttgtcatccagtcga
tacgacaacaccggtggaggagccattgaggtgattagtcctgctagttcaccagtccaa
ccgcaacaggacaaaccagaggaaggacaacaacaggcagcagccgctggcatgcggccc
tacgacataagtcgttaccggccatcaggggagccaccacagcccagtccccagcagccc
ccctcttcccagattgacagctactcccaggttcccaagactcaccgggtcatgaccttg
gcagaccacatttcgcatatcataacccaggactttgcccggaatcaggacccccctcct
gtctcctcctcagccacattccagagtgtgatgccacccgtgtcctcttcagggcgagcc
aaggtgtccagccgctacagtcctgagaatcaggtccaggccccacaccaccagagatcc
tccagcagagtttctccagagaatgcccctgacaagcccagagccaggccaggaaaatct
ccagagcgaggcggcaggcagatggagaactacgaacccatctctccaccacagagctac
caaggcgtggacaaacaggagatggtcgggcccccaccccagaggcgagaggctgacaac
tccgagctcaggactgactcacggtccccggggagtgtcagctatctgccttccttcttc
accaagctggagaacacctcgccaatggtgaaatccaagaagcaggagatctttcgtaag
ttgaactccaactctggtgccggtgattctgatgttggaaacgcacaaccaggcacagag
attttcaacttgcctgctgttacaagctccagcagcatcaacaccaggaatcactcgttt
agtgaccctgccagtaacctgggcctggaggacatcatccgtaaagccttgatgggcaac
ttggaggagaaaccggaagaacaccaaggaggacttggagctcagggagccatcaacaac
acaccctgcacaggcagtgaagcccgccaggaggccaaccggtcacccagtatgggaaag
cagaaaccgggcaaggccaacagccggaaatccaagtcacctaacctgggtcagtcctac
actggaggggagcgtccctcctcagtgtcctccgtccactccgagggagattatcaccga
caagcccaaacccagccccaatggagctgggacgatcgaccctcatccacaggatccatg
cagttcccttacaacccgctgaccatgcgcatactgagcagcacgccacccacctccata
gcttccccttccatacagagtcagcaacagaagcagcagcagcagcagcagcagcagcag
cagccgccgccccctccaactggagccccggtggcccagcagcgcgtgtggcagtctctg
ctgtcagagcaatacgagaccctgtctgacagcgacgactga
DBGET
integrated database retrieval system
