Etheostoma spectabile (orangethroat darter): 116700585
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Entry
116700585 CDS
T08457
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116700585
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
DSCAM family
116700585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
116700585
NCBI-ProteinID:
XP_032389789
LinkDB
All DBs
Position
13:complement(27343836..27398050)
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AA seq
2127 aa
AA seq
DB search
MHSSLGRRGGDMGGAEALLSSPACLAGQQGWRDLRGAQSPVQHGDPPGQKTAPHTCQDSQ
IFLKNIPAIYGMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPA
GGTPSAILRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQA
GKIRSPNIRIKAVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIV
PGNRFSLTTFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTIL
DSFQAGEVHAGQSIELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLKQEDS
GSYACEVTNSFGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTINWY
SNTEPIIPDQHISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPR
IVSSFSERVVNPGEPFSLMCGAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSH
VNVSSPLIRDGGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVI
GYPYYSIKWLKDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTV
HVTVKVPPLIQPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDDQLIVPGSASGVAIET
KEFMSSLQISKVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAG
VLNCSVEGYPPPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLC
QASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDT
VIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQA
NIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTW
RAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKYAQYGVVVQ
AFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVITWSEPPRLTLHGVLKGYR
VVFWSLFPDGGGCCGGQAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAG
DGVRSNVLYIQTREDLPGPPAGIKAVPSSSSSVVVSWLPPHKPNGVIRKYTIYCSSPGSG
QPAPSEYEANPEMLFYRITHLTRGKQYHIWSAAVTTAGRGNISSKVTVEPAGKVPAKILS
FGGTVTTPWMKEVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVK
AEDSGYYTCTATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIR
GFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKT
HGREPVFNKDQPLLTHINSTHAGLNLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTT
QLFLSELREATWYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFS
IGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSG
PLIDMSDIRPGTNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGS
HGITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTIT
ECFISDSSSDQMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHR
ANKSEFCNLPLYMKTDPFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAK
QQVLTLGHSGLSSLGASSGTATLPQRTLTMPSSNTAATASTSSTSSNPTNSNKVGGSRDS
LLESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtagtcttgggaggagaggaggggacatgggcggggctgaggcgcttctcagt
tcccctgcatgcttagcggggcagcagggctggagagacctccggggagcacagtcgcca
gtccagcacggagacccgcctggccaaaaaaccgcgcctcacacttgccaggattcccaa
atattcctgaaaaatatacctgctatttatggcatgtggcttgtaactttactcctgctg
tactctctccaagaagtacacagtgaggatgtgggctccaccaggctgtactttgtgaat
gcctccctgcagagggtaacctactccagctcggtgggggtgtccctgccctgtccagca
gggggcacccccagtgccattctgcgctggtacctggccaccggcgacgacatctacgac
gtgccccacatccgccacgtgcacgccaatggcaccctacagctgtaccccttctcgccc
tcggcctacaacagctacatccacgacaacgactacttctgcactgccgaaaaccaagcc
ggcaagatccgcagccccaacatccgcatcaaagctgttttcagggagccctacaccgtg
cgggtggcggatcagcgctcgatgcggggcaacgtagctgtgttcaagtgcctcatcccc
gctgccgtgcaggagtacgtcagcgtcgtgtcctgggagagagacactgtttccatcgta
ccaggtaacaggttctcgctgaccacctttggggctctttacatctctgatgttcagaag
gaggatgccctctccacataccggtgcatcaccaaacataagtacagcggcgagacgcgc
caaagcaacggagccaggctctctgtgatggaccctaacgagtcctcacccaccatcctg
gacagtttccaagcaggggaggtgcacgcaggccagagtatcgaactcccctgcatagcg
ggagggtaccctagccccaccgtgcgttggcttaaagatggtcgcccgctgccctcggat
gcccgctggacacggcgtttgacagggctgaccatcagtgacctgaagcaggaagacagc
ggcagctacgcatgcgaagtcaccaacagttttggctcaaaggaggtgtctggacagctt
cacgttatagatccactacgagtgaccttgtcccctaagaatctgaaaactggcatcagc
agcacactgttcttcacctgcactgtggagggctctccagaatacaccatcaactggtac
agcaacacagagcccatcatccctgaccagcacatctccatccagggacaacacaacgac
accttgcagatcactgctgcgcagaagttccactctggggcctaccaatgcttcgcctcc
cgaaagggccacactgctcaggacttttccattattctgctagaggatggaactcctcgt
attgtgtcttccttcagcgagcgggtggtgaaccccggcgagcctttctccctcatgtgt
ggggccaaaggagccccacccccctccatcacctggacgctggacgacgagcccgtggtc
cgagactccacctacaagaccagccagtacaccctgtcagacggcttgaccgtgtcacac
gtcaacgtcagcagcccgctcattcgagatgggggagtgtatcgttgcgtcgcacgcaac
tcggccggtagcgccgagtaccaagcgcgcataaacgtaagaggtccaccccgaatcaga
cccatgcgggacatcaccgcagtggcgggcaggaacacctacataacgtgccgcgtaatt
ggctacccgtattactccatcaagtggctgaaggacggcatgcagctgcctgataatcat
cgtcaagtggtgtttgagaatggcaccctgaggctgacggacgtgcagaagggcgcggac
gagggcacctacttgtgtagcgtcctgatccagccccaggtgtcaatcaaccagaccgtt
catgtcactgtcaaagtgccgccgctcatccaacccttcgatatcccctctacctcagtg
gggaagctcatgtacattgcctgtgtggtgtcatctggggacatgcccatacgcattacc
tggcacaaagacgaccagctcatcgtgccaggctccgcctctggcgtcgcaatagagacc
aaagagttcatgagctccctgcaaatatccaaggtgacactgaagcacaacggaaactac
acctgcatcgccagcaacgccgccgccactgtcagctgggaaagacagttgattgttact
gtgccaccacgttttgtggtgcagcccaacaatcaagattgtatctatggcaaggctggc
gttctcaactgctctgtggagggttacccacctccaaaggtcatgtggaaacacgccaaa
ggtgtaggaaaccctcagcagtaccacccagtccctctcactggccgtatccagatcatg
tcaaacggctctctgctcatccgacacgtgcttgaagacgaccgagggtactacctctgt
caggcctccaacggagtgggctcagacatcagtaagagcatgatcctcactgtcaagatt
cctgccatgatcaccagccaccccaacaccaccatggcgagaaagggccagaccaaggag
ctgaactgcacagcacgcggggagcagcccatcatcatccgctgggagagaggagacacc
gtcatcgatgctgagagaaacccccgttactctataaccatcaacaagaagggggacgaa
gtcatctctacccttaagctcaacccagccgagcgaggagattctgtcttcttctcctgc
cacgccatcaactcctatggagagggtcgagggctcatccaacttactgtgcaagaacca
ccagatccccctgaactggaagtaagggaggtgaaggacaggagcatgaacctgcgctgg
atccaaaggtttgatggaaacagcatcatcacaagctatgacattgagtacaagaacaag
tcagactcctgggatcacatgtatacaaccagaaacatctcacccactaacaaccaggcc
aacattgtagagttgcacccggcttgtgtttacagcattcgaatgtactcctacaacaag
ataggccgcagccttcccagcaaagagctcacaatcagtactgaggaagcaccacctgac
gggccaccaatggatgttatcctccaaccgatgacatctcagagcatacgggttacatgg
agggctcctaagaaggagctgcagaacggggtgatccgaggctaccagatcggttacaga
gagaatggtccaggcagcaacggccagtacagcatagtggagatgaaagctacaggggac
agtgaagtgtacaccttggacaacctaaagaagtatgcccagtacggggtagtggtccag
gccttcaacagagccgggacgggtccatccagtactgagatcaacgccaccacgttggaa
gatgtgcccagtgagccgccgcagaacgtgcgagccatctctgtgacatcagacgaggcg
gtgatcacgtggtcagagcctccacggctgacgctgcacggtgtgctgaaaggctaccgg
gttgtgttttggtccctcttccccgacggaggtgggtgctgtgggggccaggcccaatgg
ccaatgcagaaatggggggagatgcagaatatcaccaccacacgtgaacaggtggagctg
cgagggctggagaagttcaccaactacagtgttcaggtgctggcctacacacaagctgga
gacggggtccgcagtaatgtcctgtatatccaaacccgcgaggaccttcctggtccaccg
gctggcatcaaggcagttccctcctcttcgagtagtgtggttgtgtcctggttgcctcct
cacaaaccaaacggtgttatccgcaagtacaccatctactgctccagtccggggtctggg
cagccggcacccagtgagtacgaggccaacccagagatgctcttctatcgtatcacgcac
cttacccgtggtaaacaataccacatctggtccgcagccgtgacaactgccggccgaggc
aacatcagctcaaaggtcacagtggagcctgctgggaaagtcccggctaagatcctgtcc
tttggaggcacggtgaccacaccctggatgaaggaagtgcgtctgccctgcagctcagtg
ggagaacctgcccccacaattaaatggaccaaagacagtgaggactcggccattccggtg
acagctgatagtcaacggcagatcttatccaacggcaccctggtgctgcgttcagtcaaa
gcggaggattctgggtactacacctgcacagccactaacaccctgggctttgacaccatc
atagtcaatctggtggtgcaagttcctcctgatcagcctcgtctgacagtctccactacc
tcaacctcttctatcaccctggcttggatccctggggacaatgggggaagctccatcaga
ggatttgtgctgcagtattctgtggataacacagaggaatggagggatgtgtttatcagc
tccagtgaacgttccttcaggctggacaatctgcgctgtggaacctggtacaaggtcaag
ctggctgccaagaacagcgtgggctcagggcgcatcagtgagatcattgaggctaagaca
catggaagagaaccagtgttcaataaggatcagccgctgctcacccacatcaactccact
catgccgggctcaacctgcagggctggaccagcggcggctgccccatcactgacatgatg
ctggactttaggcccaagggtacctgggcgtggcagagtctcaaagcaaactccaccact
cagctcttcctcagtgagctgcgtgaggccacctggtacgagctcaaaatgaaggcatgc
aacagtgctgggtgtggcaaccagagctcccagttcgccaccaccgactatgatggcagt
acaatccctcccattaaatcagctcgtggagaaggggatgacgtgaagaagctgttttcc
attggctcccccgtcatcctggttactcttggtgttgctttgctcttcattatccgcaag
aaacgcaaggagaagaggcttaaacgacttagagatgctaagagcctggcagagatgctt
atcagcaagaacaatcgcagtatagacactccagtaaagggccctccccaaggaccaagg
cttcacattgacatcccacgtgttcagctactcatcgaggacaaggaaggcatcaaacag
ataggggaggacaaggctgcggtgccagtgacagacactgagtttagccaatcagtgaat
ccgcagaacttctgtacaggcgtgtctctgcaccaccaagcccttatccagaactctggg
cctttgattgacatgtcggacatccgcccaggcaccaaccccgtgtccaggaagagtata
aaatcagcccacagctccaggaacagatattccagccagtggacactgagccgaccgagt
caaagccagtcgacagcctcggcgcgaactctgacctccgactggcggacgatgggctct
cacggcatcaccgccactgaaagtgacagctacagcgccagcctctcgcaagacacagat
aaggggcgcaacagcatggtgtcgacagagagcgcctcgtccacctatgaagagctggcg
agggcctacgagcacgccaagctggaggagcacctgcagcacgccaagttcaccattaca
gagtgtttcatctccgatagctcatccgaccaaatgaccacaggtaccaatgacccggca
gacagcatgacctccctcagcacgccatctgaacctggcatctgccgcttcactgcctcg
ccgcccaagccgcaggactacgaccgtggtaaaaacgtggctgtgcccattccccaccgc
gctaacaaaagtgaattctgcaaccttccactctacatgaagacagacccattctttcgc
aaacaaggggagctgcatgacccgtgcccggcagtgccaccgcgggaagcctcaatccgc
agcctgacgcagcgggcgtatcacacccagggccgtcacaagactctagaccctgccaag
cagcaggtcctgacgctgggccattctgggctgagcagcttgggtgcgagctcgggcact
gccaccttgccccagaggactctgaccatgcccagctccaacaccgctgcaacagcttcc
acttccagcacgagcagcaaccccaccaacagtaacaaggtggggggctccagagactcg
ctgctagagagcagctcctctgcgctggggagactgcagaaacagagtgtgggggcctat
tccaagtcatacacactggtgtag
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