Etheostoma spectabile (orangethroat darter): 116700636
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Entry
116700636 CDS
T08457
Name
(RefSeq) junctional adhesion molecule A-like isoform X1
KO
K06089
junctional adhesion molecule 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecule (CAM) interaction
esp04517
IgSF CAM signaling
esp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116700636
04517 IgSF CAM signaling
116700636
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116700636
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116700636
04090 CD molecules [BR:
esp04090
]
116700636
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
CTX family
116700636
CD molecules [BR:
esp04090
]
Proteins
116700636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
Ig_6
C2-set_2
S1FA
MLANA
Syndecan
ASFV_P17
Motif
Other DBs
NCBI-GeneID:
116700636
NCBI-ProteinID:
XP_032389898
LinkDB
All DBs
Position
13:complement(26600715..26611343)
Genome browser
AA seq
299 aa
AA seq
DB search
MHVSGVVSVALFFFAATGVSGFSVTTSNSDVQVKENAGTDLTCTYSADFGSSPRLEWKFK
DLKDSQSYVVYDGKPTSSYASRVTLYGSNLRFSKVTRVDNGVYYCEVTGSTGQFGEVEVK
LTVLVPPSPPMCRVPASVTTGGVAMLSCNDAAGSPPPQYNWYKDGVLLPADPNKISGFKN
ATYKLNAKNGNLEFPALTKMDSGQYFCEAFNTAGPPQRCAVKSMEVRDLNTGGIVAGVIV
ALLLVILLVLGVWYANKKGYLPKKKESKPKPSVVYQPTSLHGGGEEEDGEFKQKSSFVV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcagcggtgtggtttcggtggctttgttctttttcgcagcgacaggtgtaagt
ggcttttcagtcaccaccagcaacagcgatgtgcaggtgaaagaaaatgcagggactgac
cttacatgcacgtattcagctgactttggttcaagccctagacttgagtggaaatttaag
gatctaaaagactcacagtcgtatgtggtctatgatgggaaaccaacatcgtcgtatgcc
agccgagtgacattgtacggtagtaatctgagattctccaaagtgacccgcgttgataat
ggagtgtattactgcgaggtgactggcagcaccggccagtttggggaagttgaagtgaag
ctgactgttctggtgcctccatctccgcctatgtgtagggtccccgcctcggtgacaacg
ggtggggtggccatgttgtcctgcaatgacgctgctggctcacctccgccccaatacaac
tggtacaaagatggcgtccttctgcctgctgatcctaacaagatttctggcttcaaaaat
gccacctacaagcttaatgcaaagaatggcaacctggagtttccggctttaaccaagatg
gactccggtcagtacttctgtgaggctttcaacactgctggtcctcctcagcgctgtgca
gtcaagtcaatggaagtccgtgacttaaacaccggaggaattgttgctggggtaatagtg
gctctgctgctagtgatcctgctggtacttggcgtttggtatgccaacaagaaaggatac
ctgcccaagaagaaggaaagcaaaccaaagcccagcgtggtctaccagcccacatcatta
catggtggtggtgaggaagaagatggggaattcaaacagaagtcatcattcgtggtttag
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