Etheostoma spectabile (orangethroat darter): 116700740
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Entry
116700740 CDS
T08457
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116700740 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116700740 (sec24a)
Membrane trafficking [BR:
esp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116700740 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
116700740
NCBI-ProteinID:
XP_032390060
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All DBs
Position
13:complement(14969396..14992121)
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AA seq
1147 aa
AA seq
DB search
MSTAGFNSQNGTGQAYANGPSQNPVGLQPLPGVSYGMTHQPTYNPMQAKAPATTGTGLYP
SGPYQPVHPVSPYQPGPTLSSYPAPSGQSLLTRPLIGGPPSHTPPQSSSPGPRLPPAQAT
PPPPAVSSSSYYPNPQQPQPMAPAWQYSTAPPPMGQPTSMSVPPRGLVPNNVNPAASSTP
PPAPYSSAPSAHVSHSVTQTPGPGMPSTSLHGYTQPGPAPPPMTHTAPHAYQSSRAPYGS
PPTGPPPTMKPTPPHTGSLMINATPPPPKADAQCGGAVNSTLPPTEPDCQEGDIECPGTV
AGNGQQAPNSYNHVDNKMAGLPQHGPPGRHLGHYPSLPPGYQNTSATHNAGPPMHPAMQA
ATQPYTQAPQTYQQPPGGPGPAQLSPSLAALSLQSSTPEALRVVNLLQERNLLPPSPMPA
PTPCLPQDLQKINCNPEVFRSTLTSIPQTQSLLNKAKMPLGLLLHPFKDLSQLPVVTSST
IVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYNPVSRSYGEPHKRPEVQNAT
IEFIAPSEYMLRPPQPAVYLFILDVSHNAVETGYLHVFCQSLLDNINALPGDSRTKVGFI
TFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNLNECKEIVQDLLKSLPNLFE
KTMETQSALGSALQAAFKLLSPTGGRMSIFQTQLPNLGVGALQSREDPNQRASAKDIQHL
SPATDFYKKLALDCSGQQVAVDLFLLSSQYCDLASLGCISRYSAGSVYYYPSYHHQHNPA
QVECFQKDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGFA
VQMSIEENLVDMQVVSFQAALLYTSSKGERRIRVHTLCLPVVNSLSDIFAGADVQAITGL
LACMAVDRSTTASLSDARDAMTNAAIDSLTSFRQSVLTIQQPGLLAPACLRLFPLFILAL
LKQKAFRTGTSTRLDDRLFAMCQLKYQPLVYALLMIHPALYRVDDLSDEGALNINDRTIP
QPRVLQLSVEKLSREAAFLMDAGTVMYLWIGRNCHPNFLTQVLGVPNYAAVPDNLYLLPE
LDTAESQRTRAFIGWLRDQRPFFPSLHVIRDESQLKPTFMQNMIEDRTESALSYYEFLLH
LQQQISK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcgggatttaactctcagaatgggacaggacaggcatatgcgaacggtcct
tcacagaatccagttggcctgcagccgctgccaggggtcagctatggcatgactcaccaa
ccaacctacaatccaatgcaggccaaagctcccgcaaccactggcactggactctacccc
tctgggccataccaacctgttcacccagtcagcccctaccagcctggcccaacactcagt
tcctacccagctccttcaggccagtcactgttgaccaggcctctaattggaggtcctcca
tcccatacccctcctcagtcttccagccctggtcctaggctgccacctgcacaggccaca
cctccccctcctgctgtgtcttctagtagttactacccaaacccccagcagccgcagccc
atggctccagcgtggcagtacagcacagctcccccaccaatggggcaacccacctccatg
agcgtacctccccgcggccttgtgcctaacaatgtaaacccagctgcaagctcgacaccg
ccaccagcaccgtacagctctgcaccatcagcccatgtgtcccatagtgtcacccagacc
ccaggcccagggatgccctccacctctctacatggatatacccagccaggccctgcacct
ccaccaatgactcacacggctccacacgcataccagtcaagcagagcaccttatggctcc
ccacctacaggcccaccaccaaccatgaaacccacaccccctcatactggatccctaatg
atcaatgccacacctccaccccccaaggcagatgctcagtgtgggggtgctgttaacagc
actctgccccctactgagcccgactgccaggagggggatattgaatgtccaggaactgtg
gctggcaatggccaacaagcaccaaacagctataaccatgttgacaacaaaatggctggc
cttccccagcatggaccacctggtcggcacttgggccactacccctcccttccacctggg
taccagaacacctcggctacccacaacgctggccctcccatgcaccctgcgatgcaggct
gccacgcagccttacactcaagcacctcagacataccagcagccacctgggggcccagga
ccagcccaactgagcccatccctggcagccttgagcctccagtccagcaccccagaggcc
ctgagagtggtcaacctgctgcaggagaggaacctgctgccaccaagcccgatgcctgcc
ccaacaccctgtctcccacaggacctgcagaaaatcaactgcaacccagaggtttttcgt
agtacgctgaccagcatccctcagactcagtcactgctcaataaagccaagatgccactg
ggcctgctgctccaccccttcaaagacctttcgcagcttcctgtggtgacatccagcacc
atcgtccggtgtcggtcctgcagaacatacatcaatccctttgtctctttcctggaccag
aggaggtggaagtgcaacctgtgctatcgggtcaatgatgttccggaggagtttatgtac
aacccagtcagcagatcgtacggagagccacacaaaagacccgaggtccagaacgccacc
atcgaattcattgctccttcagaatacatgctgaggccaccacaacctgctgtttacctc
ttcattcttgatgtatcccacaatgcagtggaaacaggctacctacatgtgttctgccag
tcactgttggacaacatcaatgcgcttcctggggactctaggacaaaggtaggcttcatc
acctttgacagcaccatccacttctacaacctccaggagggactttctcagccccagatg
ctcattgtgtctgacattgaagatatctttttaccaacaccagacagccttttagtaaac
ctcaatgaatgcaaagagattgtgcaggatctgctgaagagcctgccaaatctatttgaa
aagaccatggagacccaatctgccctaggttcagctctgcaagcagccttcaagctgctg
tcacctactggagggcgcatgtctatctttcagacccagctgcctaacctcggtgtaggg
gcactccagtccagagaagaccccaaccagcgggcatctgccaaggacatccagcactta
tccccagcgacagacttctacaagaagctggctctggactgttctggccaacaggtggca
gttgacctgttcttgctcagctctcagtactgcgacctagcatcgcttggctgcatatcc
agatactcagcagggagcgtttactactacccctcctaccaccaccagcacaaccccgct
caggtggagtgcttccagaaggatctgaagagatacttaaccaggaagatcggctttgag
gctgtcatgaggatacgctgcactaaaggcctgtccatccacacgttccacggaaacttc
tttgtgcgctccacagacctgctgtcccttcccaacgtgaacccagacgctggctttgca
gttcagatgtccattgaggaaaacctggtcgatatgcaagtcgtctctttccaggccgcg
ctgctttacacgtccagcaaaggagagaggaggatccgtgtccacacgttgtgtctccct
gtggtaaattctctgtcggacatctttgctggggctgatgttcaagcgatcactggactg
ctggcttgtatggctgtggaccgctcgacgacagcaagtctgagtgacgccagagatgca
atgaccaacgctgccattgactcgctgacatcattccgccagtctgtgttgaccatccag
cagcccggccttctggccccggcctgcctcagactcttccccctcttcatccttgctctg
ctcaaacagaaagccttcaggacgggcaccagcaccaggctggatgaccggctctttgcc
atgtgtcagctgaagtaccagccattggtctacgcattactgatgatccaccctgctctg
taccgtgtcgacgatctgtccgatgagggagctttgaacatcaatgatcgaaccatccct
cagcccagagtgctgcagctgtctgtggagaagctcagcagggaagcagctttcctcatg
gatgctggaacggtcatgtatctgtggattggacggaactgccaccccaacttcctcaca
caagtcctgggagttcccaactacgctgccgtgcctgataacctgtatctgctcccagag
ctagacactgccgagtcgcagagaaccagggctttcatcggttggctgagggatcagagg
ccgttctttccctcactgcatgtcatcagggacgagagccagctgaaacccacctttatg
cagaacatgatcgaggaccgaacagagtcggccctgtcgtactacgagttcctcctccac
ctccaacagcaaatctccaaatag
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