Etheostoma spectabile (orangethroat darter): 116700780
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Entry
116700780 CDS
T08457
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116700780
04082 Neuroactive ligand signaling
116700780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116700780
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116700780
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
116700780
NCBI-ProteinID:
XP_032390119
LinkDB
All DBs
Position
13:18322421..18357818
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AA seq
472 aa
AA seq
DB search
MLILKVDQGFLVVGCLRGMAFLLTCLFLSCASSVWGNKHGDTNIYLDNITRILDRLLDGY
DNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRL
NNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNF
PMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLKSN
TGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAAMK
VAAQESAAAAAVSATGNDGEVSSVDASSVLKKRMNSAPLFDRPAKTFPNPPVNAQAFLQQ
GSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDSV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgaccagggatttctagttgtggggtgtttgcgaggcatggct
ttccttttaacttgcttgtttctgtcttgtgcgagcagtgtttggggaaataagcacggt
gataccaatatctatttggataacatcacgcgcatattggatagattattggatggatat
gacaacaggctgcgaccaggatttggaggtccagttacagaggtcaaaactgacatcttt
gtcaccagctttggacctgtttcagatgttgagatggaatacaccatggacgtgttcttt
cgtcagacatggatcgacgaacggctaaaatttgaaggccccattgagatcctgcggctc
aacaacctgatggtcagcaagatatggacgccggacaccttttttcgaaatggcaagagg
tcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaacggaact
atcctctacaccatgagattaactataaatgcagagtgccccatgcgtctgatgaacttc
ccgatggatggccatgcctgccccctcaagtttggaagttatgcttaccccatcagcgag
attgtgtacacttggaagaagggtcctctgtcctctgtagaggtgccacaggaatcatcc
agtttgctgcagtacgacctcatcggtcagacagtgtcaagcgagaggctaaagtccaac
acaggtgaatatgtcatcatgacagtccacttccacctgcaaaggaaaatgggcttcttt
ctgattcagacttacattccctgtattatgactgtcatcctggcccaagtctctttctgg
attaataaggaatcagttccagctcgcactgtgtttggtatcaccactgtcttgaccatg
acaacgctcagtatcagcgctcgtcactcccttcccaaagtttcttacgccacagccatg
gattggttcatcgccgtttgctttgcctttgtcttctccgctctgattgagtttgcagcc
gtcaactacttctccactctgcaggccaaccgggagctgaggaaggcagcagccatgaaa
gtggcggcccaagagtcagcagctgcagctgcggtttctgcaacggggaacgacggagaa
gtttcctcagttgatgccagtagtgtgctaaagaagaggatgaactctgccccgctgttt
gaccgtcctgccaaaacatttcccaacccacctgtcaatgcccaagccttcctgcagcag
ggttcagctgtaccggccaacaacgttctgactggcaccagcatcatcgataaatactcc
cgcatcctcttcccgctttcgtttggcgccttcaacctggtctactggatcgtctatctc
actaaggacacgatggagatgtccagggatagcgtttag
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