Etheostoma spectabile (orangethroat darter): 116700827
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Entry
116700827 CDS
T08457
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04142
Lysosome
esp04144
Endocytosis
esp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116700827
04142 Lysosome
116700827
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116700827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116700827
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116700827
Membrane trafficking [BR:
esp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116700827
Exosome [BR:
esp04147
]
Exosomal proteins
Proteins found in most exosomes
116700827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
116700827
NCBI-ProteinID:
XP_032390190
LinkDB
All DBs
Position
13:5689360..5724196
Genome browser
AA seq
1690 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPSNIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
GEELFARKFNNLFAAGNFSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
TKVKQLPLIKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLSWFLQ
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAVKEQVDK
LETSETVRKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYSQPAAQP
GFGYGMWSGG
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgcctattcgctttcaggagcacctgcagctccaaaatttagggatc
aatccatccaacataggcttcagcaccctaaccatggagtcggataagttcatctgtatt
cgggagaaggtgggcgagcagactcaggtggtgatcattgacatggcagaccccaataca
cctatccgcaggcccatctcagctgacagcgccatcatgaatccagccagcaaagtcatt
gcacttaaagacgccgccaaaacccttcagatcttcaacatcgagatgaaaagcaagatg
aaggcacacaccatgaccgacgatgttaccttctggaagtggatctcccttaatacagtt
gcacttgtgactgacaatgccgtctaccactggagcatggagggtgactcacagcctgtg
aaagtctttgaccgccactccagcctggcaggctgccagattatcaactaccgcactgac
gccaagcagaaatggctcctgctcatcggcatctcagcccagcaaaatcgggtggttgga
gccatgcagctctactctgttgacagaaaggtttctcagcccatcgaaggccatgctgcc
agctttgcccagttcaagatggaggggaatacagaggagtcaactttgttctgcttcgct
gtcagagggcaggctggagggaagttgcatatcattgaagtggggaccccaccaactggc
aaccagccattcccaaagaaagcagtggatgtgttcttccctccagaagctcagaacgac
tttcctgtggccatgcagataagctccaagcaagatgtggttttccttattaccaaatat
ggatacattcacctgtatgacttggagacaggcacctgcatctatatgaaccgcatcagt
ggtgagaccatctttgtcaccgctccacatgaggctacctcaggcatcattggggtcaac
aggaaggggcaggttctgtcggtctgtgtggaagaggaaaatatcatcccctacatcact
aatgtgctccagaatccggacctggctctccgcttagcggtccgcaacaaccttgctggt
ggtgaagagctctttgcacgcaagttcaacaacctgtttgctgctggcaacttctctgag
gctgccaaagttgctgccaatgcaccaaagggtatcctgcgaaccccagacaccatccgt
cgcttccagagcgttcccactcagccaggccagacctcccccttgctgcagtactttggt
atcctgttggaccagggccagctcaacaagtttgagtcccttgagctttgcaggcctgta
ctccagcaggggcgaaagcagctcctggagaagtggctaaaggaagacaagctggagtgt
tcggaggaacttggtgacctggtgaaggcagtggatcccaccttggctctcagtgtctac
ctgagggccaacgtccccaacaaagtcatccagtgctttgcagagactggtcagttcccc
aagattgtcctgtacgctaagaaggtgggctacactccagactggatctttctgctcagg
aatgtgatgcggatcaacccagaacaaggcctgcagtttgcccagatgctggtccaggat
gaagagccactggctgacatcacacagattgtggatgtattcatggagtacaacctgatc
cagcagtgtacctcattccttctggacgctctgaagaacaacagaccctcagaaggacct
ctgcagactcgcctgctggagatgaatctcatgcatgcgccacaggttgctgatgctatc
ctgggcaaccagatgtttaccaactacgatcgtgcccacatcgcccagctgtgtgagaag
gctggactcctgcagagggcgttggagcactacaccgacctgtatgacatcaagcgcgct
gtggtgcacacacacctgctcaacccagagtggctggtgaacttctttggcgcgctgtcg
gtggaggactccctggagtgcctcagggccatgctgtcggccaacatccgccagaacctg
cagatctgtgtgcaggtggcttccaagtaccatgaacagctcaccacacagtctctcact
gagctttttgagtccttcaagagctttgaaggtctgttctacttcctgggctctattgtg
aacttcagtcaggaccccgaagttcactttaaatacattcaagcggcctgcaagacgggt
cagatcaaagaggtggagaggatctgtcgagagagcaactgctacgaccctgagcgtgtc
aagaacttcctcaaggaagccaaactcaccgaccagctaccactcatcatcgtctgcgac
cgctttgactttgtccacgacctggtcctctacctgtaccgcaacaacctgcagaagtac
attgagatctatgttcagaaggtgaatcctagccgtctgcctgttgtggttggtggtctc
ctagacgtggattgctcagaggatgtcatcaagagcctgatcctggtcgtccggggacag
ttctcaactgatgaactggtcgcggaggtggagaagagaaacagactgaagctgctgctg
ccctggctggagtcccgtatccatgaaggctgtgaggagcctgccacccataatgctctg
gccaagatctacattgacagcaacaacaaccccgaaagattcctgagggaaaacccctac
tatgacagccgtgtggtgggaaagtactgcgagaagagagacccccacctggcctgtgtt
gcctacgagagaggacagtgtgaccaggagttgatcaatgtctgcaatgagaactctctg
tttaagagcttgtctcgttatctggtccgccgcaaagaccctgacctgtgggccagcgtg
ctgctggagagcaaccccttcagacgaccactcattgaccaggtggtgcagacagcactg
tcagaaacccaggaccctgaggaggtgtctgtcacagtcaaggcattcatgaccgcagac
ctgcccaacgagctcatcgagctgctggaaaagattgtgttggacaactctgtcttcagt
gaacacagaaatctgcagaacctgctgatccttacagcaatcaaagctgaccgtacccgc
gtgatggagtacatcagcaggctagacaactatgatgctcctgatattgctaacattgcc
attagcaacgagctcttcgaggaggcctttgccatcttcaagaagtttgacgtcaacacc
tctgctgtgcaggtcctgatcgaacatattggcaacctggaccgcgcttatgagtttgca
gaacgctgcaatgagccggctgtgtggagccagctagctaaggctcagctacagaaggac
ttggtcaaagaagccatcgactcctacatcaaagccgatgatccctctgcatacatggaa
gtggtacaggctgctgataagagcggtaactgggaggacttggtcaaattccttcagatg
gctcgtaagaaggcccgtgagtcctacgtggagacagagctcatctttgccttggccaaa
accaatcgtctggctgaactggaagagttcatcaacggacccaacaatgctcacatccaa
caggttggtgaccgctgctacgatgagaaaatgtacgatgctgcaaagctgctatacaac
aacgtctccaactttggtcgtctggcttcaactttggtgcacctcggggagtaccaggct
gctgtggacggcgcccgcaaagccaacagcacccgcacctggaaagaggtgtgcttcgcc
tgcgtggatggaaaggagttcaggcttgcccagatgtgcggtctccacatcgtggtgcac
gctgacgagctggaggagctgatcaactactaccaagaccgtggttactttgaggagttg
atcaccatgctggaggccgccctgggcttggagcgcgctcacatggggatgttcacagag
ctggccatcctttactctaagttcaagccccagaagatgagggagcatctggagctcttc
tggtccagagttaacatcccgaaggtcctgagagcagccgagcaggctcacctgtgggcc
gagctggtcttcttgtatgataagtacgaggagttcgacaacgccatcatcaccatgatg
aaccacccaacagatgcctggaaggaggggcagttcaaagacataatcaccaaggtggcc
aacgtggagctgtactacaaagccacccagttctatctggagttcaagcccttgttactg
aatgatttgcttatagtgctttcccccagactggaccattcccgtgctgtcaacttcttc
accaaggtgaaacagctgcctctgatcaaaccctacctgcggtcagtacagaaccacaac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaggactatcaggca
ctgaggacatcaatagatgcctacgacaactttgacaacatctcactggcacagcgcttg
gagaagcacgagctgatcgagttcaggagaatcgctgcttacctcttcaagggcaacaac
cgctggaaacagagtgtggagctctgcaagaaggacaagctctataaggatgcgatgcag
tatgcgtctgagtccaaggacatcgagctggcagaggagctgctgtcctggttcctacag
gaggacaagaaggagtgtttcgccgcctgcctgttcacctgctatgacctgctgcggcct
gacgtggttctggagaccgcctggaggcacaacatcatggacttttctatgccatatttc
attcaggtcatgagggagtacctcagcaaggttgatgcagttaaggaacaggtagataaa
ctagaaacctccgagaccgtaaggaaagaagaggagcaggcaacagagacgcaacccatc
gtctacggcacaccccagctgatgctgacagcgggccccagcgtacctgtggccccccag
caagcttacggctacggctaccaggcgcctgcaggttacagtcagccagctgctcagcca
ggctttggctacggcatgtggagcgggggataa
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integrated database retrieval system
