Etheostoma spectabile (orangethroat darter): 116700946
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Entry
116700946 CDS
T08457
Symbol
rsf1
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116700946 (rsf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116700946 (rsf1)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
116700946 (rsf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
WSD
Protamine_P2
Motif
Other DBs
NCBI-GeneID:
116700946
NCBI-ProteinID:
XP_032390331
LinkDB
All DBs
Position
13:complement(13005072..13023557)
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AA seq
1820 aa
AA seq
DB search
MAASAATASSSPGLCPNYAVICSFLERYGVLLDLPELTFPQLERYLQDTSSVPKLLVDLH
VKLLRKIGKSVTADRWEKYLVKVCQEFNTTWAWELEQKGYKELPTECKTGILKYLCECQF
DENVKFKTAINEEDPDKMRLQPIGRDKDGQMYWFQLDQDDNVRVYLEEQDDLDGSSWKCI
VKDRNDLAEVVALLKTQIDPALLKKDQETKPDGEEGEVKKIEDSSDEDNKDSNKDVGPLS
PKTENKEKVTQKENMKSETSEATSSLNGTIEGKTETELNSEKPTDCSINSKAQNIKEEPM
EVSNTKTSTTTSEPSSEMSCISVKTEKREEARKNSAEEIQQALKNDQQAKIPLKKRGMKF
SEDFEKHSGIIVPNPSVSQVKEAPKADSAPEQTKKAHCVNDHVNGEVQPSSEKGFQSNLC
KSPKDAAVHKEQTVEPVADKSVEKRENDSPSDKDDMQDKKDEACRAEKVTEGVASNQANS
GKKNIDVQLEKESTASKEMKEAHKSLPPLPKDTNNEPEKSSNHEEHEKIRGSIPAISKES
CPVDKTLKETNTTFTAGESEKVTSKEVESKDSEEKPASVDTSESNPTKKSENVTDMKQAE
RGDAKETETSESKLDKPAAKEKPEVIKTAYPANKSADAVSPSVIKKTEILKDSDNTETQE
ATQTPKVIEKADKPVISEKIQGTESSVIKKLDKSCRPVEKHGNVKDAEINPEQASVASES
NTEKTKKTDKPEDIKKTVNCEDDTIHSVSKISNSTPRATEVDAVVIKPDLTKPQEDDKTE
INSVACMMTEEASEGKDKPSSGVKTTNVFKETDKKPERPDAEQEKLSEEQPKKLECLSPE
NIKDAQKENKKDTVNKNKKDTDSENKKDTDNENKKDTDNENKKDTDNENKKDTDNENKKD
TDNENKKDTDNENKKDTDNENKKDTDNENKKDTDNENKKDTVKEKKKDTVKEKKKDTVKE
NKKDTDKENKKDTVEEKLKNDSEKPQCQDKENKEDSTTATLPKTDESNEEKHTNKESKTS
TKIKESGHQKVSKEPDSKSSSETEKTCPPSKELDTKKPTEEESKSRSEDEDSATKKGVAN
GEEAPSELYRRKIKPRAHRRKAELQREERQADSESDTNTGRSLRRSPRISRPTPKVVEIH
DRKLEKSQAATPAEKCEDNEGENKKDEEGEEEEEEEEEVKAVQKKPREKKADQEGQPKPK
GRKRRKVRWSNTRTRRKKKGSEDDNDSDEESSEEDEEESEDDSDEDYKVERGRKRRNRNR
ERRSSDSSTSSDDDLPPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGE
WFCPPCQHKLLCDKLDEQLQNLDAALKKKERAERRKERLIYVGISLENIITPSVEEEEKP
EIIIKEKKETKRSKSWGRRSTRTKKSISYRFDEFDEAIEEAIEEDLKEAEGGGAGRGKDM
ANITGHRGKDMSVILQADEGKENGRPPRPSAGQRRKKRRRLNDLDSDSTVDEEESEDEFR
ISESSEEEFVVSENDTDGEFEVDYNDSDFGSNSSRHRTSSRPRKAPKQRRSSRKRRRPRG
YSDDEEEETDEEDEDEIVTEGSSEYSDSDLDVSRRRSRRSLKKQVNYCETSESEGSQAET
NRAKMKPRHRQDSSDSEASYSRDSEESRDRRVKRKADSSEEDSRQRRRRLALKRRRASED
DDSDDDSDESSEEDRPVRKRVNRIDSDDDDEEEEQEKKADEKEDEESKGTTPVDCNAVEL
PPTNRQSPIKTLEGLVGKPAAATPGITPHLEPPKNISATPAAAIAPNGLVGQEMAAQEED
EDDLLGVTDLVDYVCNNEDL
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcaacggcgagttcttcccccggtttgtgtccaaattacgccgtg
atttgctctttcctggagcggtacggagtattgttggatttaccggagctcacctttcct
cagctggagagatatctgcaggacacatcctcagttccaaagctgctggtcgatcttcac
gtcaagttgctgaggaagatcggcaagtcagtgacagcagacagatgggagaagtatcta
gtgaaggtatgtcaagagttcaacacaacctgggcatgggaactcgaacaaaaaggatac
aaggagctgccgacggagtgcaagacggggatacttaaatatttgtgtgagtgtcagttt
gatgaaaatgtgaagtttaaaactgccattaatgaggaggacccagataagatgcggctg
cagccgatcggccgggacaaagacggccagatgtattggtttcaactggaccaagacgac
aatgtgcgtgtttatttggaggaacaggacgacttagatgggtcttcgtggaagtgcatc
gtcaaagatagaaatgacctggctgaggttgtggctctgctgaagacacaaattgaccct
gcactgttaaaaaaagatcaagaaaccaaacctgacggtgaagagggtgaagttaaaaag
attgaggactcatcggatgaagacaacaaagactccaacaaggatgttggtccactctca
ccaaagaccgagaataaagaaaaagtaacacagaaagaaaacatgaaatcagaaacctcg
gaggccacatcatcactaaatggcactattgaaggcaaaactgaaacagagctcaactca
gaaaagcctacggattgcagcatcaattcaaaagcccagaacatcaaagaagagccaatg
gaggtttcaaacactaaaacaagcacaacaacaagtgaaccctcctcagagatgtcatgt
atatcagtaaagacagaaaaaagagaggaggccaggaagaacagtgcagaggagattcag
caagctctgaagaacgaccaacaggcaaaaatccctttgaaaaaaagaggaatgaagttt
agtgaagactttgaaaaacatagtggcatcatagtaccaaacccctctgtttcacaggtc
aaagaagctcctaaagctgactcggctcctgaacagaccaagaaagcgcattgtgtaaat
gatcacgttaatggggaagttcagccttcatcagagaaaggcttccagagtaatttgtgc
aagtcaccaaaagatgccgccgtccacaaagagcagacggttgaaccagttgcagataaa
tctgtagaaaagagagaaaatgactctccatcagacaaggatgacatgcaagataaaaag
gatgaagcttgcagagcagagaaggtcacagagggagttgcatcaaaccaagcaaactct
ggcaagaaaaacatagatgtgcagttagaaaaggaaagcactgcatcaaaagaaatgaaa
gaagcacacaagtctctgccgcctttacctaaagacacaaataatgaacccgagaagtcg
tctaatcatgaagagcatgaaaaaatacgaggatccataccagcaatttcaaaagagtct
tgtccagtagacaagacattaaaggaaaccaatacaacatttacggctggtgagtcagag
aaagttacatccaaagaagttgaatcaaaagattcagaggaaaaaccagccagtgtagac
acatcagagtcaaatccgaccaagaagtctgaaaatgtaacagacatgaagcaagcagaa
aggggtgatgctaaagaaacagaaacatctgagtctaaattggataaaccagcggcaaaa
gaaaagcccgaagtcatcaaaacagcatatcctgcaaataaatctgctgacgctgtatca
ccatctgtcattaaaaaaacagaaatactaaaagatagtgataatacagagacccaagaa
gccacacaaactcctaaggtcattgaaaaggcagacaaaccagtaatcagtgagaaaata
caaggaacagagtcgtctgttattaaaaagctggacaaatcgtgtagacctgtagagaag
cacggtaacgtcaaagatgcagagataaacccagagcaagccagtgtagcctccgagtct
aacacagagaagacgaagaagacagataagcctgaagacataaagaaaaccgtcaactgt
gaagacgatacgatacattctgtttccaagataagcaactctacgcccagggctacggag
gtagacgccgtggtcattaaacccgatctgacaaagccacaagaggatgacaaaactgag
attaactcagttgcatgtatgatgacagaggaagcctctgaagggaaagataaaccatcc
agcggtgttaaaacgacaaatgtcttcaaagaaaccgataaaaaacccgaaagaccagac
gcagagcaggaaaagctgtctgaagaacagcctaaaaaattggagtgtctgtctccagaa
aatataaaggatgcccagaaggaaaacaaaaaggacacagtcaacaaaaataaaaaagac
acagacagtgaaaataaaaaggacacagacaacgaaaataaaaaggacacagacaacgaa
aacaaaaaggacacagacaacgaaaacaaaaaggacacagacaacgaaaacaaaaaggac
acagacaacgaaaacaaaaaggacacagacaacgaaaacaaaaaggacacagacaacgaa
aataaaaaggacacagacaacgaaaacaaaaaggacacagacaacgaaaataaaaaggac
acagtcaaggaaaagaaaaaagacacagtcaaggaaaagaaaaaagacacagtcaaggaa
aataaaaaggacacagacaaggaaaataaaaaggacacagttgaggaaaaacttaaaaat
gacagtgagaaaccccagtgtcaagacaaagaaaataaagaggattccacaactgctaca
cttccaaaaacagatgaatcaaatgaggagaaacatactaataaagagagtaaaacctcg
accaaaattaaggaatctggtcaccaaaaggtgagcaaagaaccggacagcaaatcctca
agtgaaacagagaaaacctgccccccaagcaaagaactggataccaaaaagcccactgaa
gaggaaagtaaaagcagaagtgaagacgaggactctgcaacaaaaaagggggtggctaat
ggggaggaagccccgtccgagctttaccgtcggaaaatcaagccccgagcccaccgaagg
aaagctgaacttcagagagaggagagacaagcggactctgagtccgatacgaacaccggg
agatctcttcggagatcacccagaatctccagaccaacaccgaaggttgtagagatccac
gacaggaagctggagaaatctcaggctgctacaccggctgagaagtgtgaggacaacgag
ggtgagaacaaaaaagatgaggagggcgaggaagaggaggaggaggaggaggaggtgaag
gctgttcaaaagaaaccaagagagaaaaaggctgatcaggagggtcagcccaaaccaaag
gggagaaagagacggaaggtccggtggtccaacacacgaacacggcgtaaaaagaaaggc
tccgaagacgacaacgacagcgatgaggagtccagtgaggaggatgaggaggagagtgag
gacgacagcgacgaagactacaaggttgagcgaggtagaaagaggcgcaatcgtaaccga
gaaagacgaagctcggactcctcgacctcctcagacgacgacctacctcctaatgacgac
ccctgcaaacattgcggtcttccaaatcaccctgagctgatcttgctgtgcgattcgtgt
gacagcgggtaccacacagcctgtctgaggccgcccctcatgatcatccccgacggagaa
tggttctgcccaccctgtcaacataagctgctctgtgacaaattagatgagcagctccaa
aacctcgacgctgctttgaaaaagaaggaacgggctgagagaaggaaagagcgtctcatt
tatgttggaatcagtcttgaaaacatcatcacgccctcagtggaggaggaagaaaagcca
gagatcatcatcaaagagaagaaagaaacaaagcgcagtaagagctggggccgaaggtct
acgaggacaaagaaatccatcagctacagatttgatgaatttgatgaggcgatcgaggag
gcaattgaggaagacctcaaagaagcagaaggcggaggagctggtcggggcaaagacatg
gccaacatcacagggcacagagggaaggatatgtccgtcatccttcaagcggatgagggc
aaagagaacggccgcccaccacgaccctccgccggtcagcgcaggaaaaaacgcaggcga
ctgaatgacctggacagcgacagcaccgtggacgaggaggaaagtgaggacgagtttcgc
atcagtgaaagctcagaggaagagtttgtcgtgtcagaaaatgacacggacggtgagttt
gaggtggactacaatgacagtgactttggcagcaacagcagcaggcatcgtacttcttcg
cggcccagaaaagcacccaaacaacgacgaagctccagaaaacggcggagaccgcgagga
tactcggatgacgaagaggaggagacagatgaggaagatgaagatgaaatagtgactgaa
ggctccagcgagtacagcgacagtgatctggatgtaagtcgacggcggtctcggcggagt
ttgaagaagcaggtgaactactgcgagacgtccgagtccgaaggctctcaggcagaaacc
aaccgggccaaaatgaaacccagacaccgccaggatagctccgacagtgaggcgagttac
tccagagactctgaggagtcgagggatcggagggtgaagaggaaagctgactcctcagag
gaagattcccggcagcggcgcagacgtcttgcactaaaacgcaggagagcttctgaggac
gacgactcggacgacgactcggacgaatcatcggaggaggatcgtcctgtccgtaaacgc
gtgaaccgcatagactcggatgatgacgacgaggaggaggaacaggagaagaaagcagat
gaaaaagaagacgaggagtcaaagggaacaaccccagtggactgcaatgccgtggagctg
ccacccactaacagacagagcccgattaagacccttgagggcctcgttggcaagcctgct
gccgccactccaggcatcaccccacacctggagccacccaaaaacatcagcgctacacca
gccgctgccatagcaccaaacggtctggttggccaggagatggcggcgcaggaggaagac
gaagacgacctgttaggtgtcacagacctagtggactacgtctgcaataacgaagatttg
taa
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