Etheostoma spectabile (orangethroat darter): 116701039
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Entry
116701039 CDS
T08457
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116701039 (supt6h)
03036 Chromosome and associated proteins [BR:
esp03036
]
116701039 (supt6h)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116701039 (supt6h)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
116701039 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
116701039
NCBI-ProteinID:
XP_032390466
LinkDB
All DBs
Position
13:21300926..21321328
Genome browser
AA seq
1751 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGDEE
EGEEEEGPAGSASGAGSDSEEEVRHRRKKRNYDDYLDEDDLDLIEENLGVKVKRRKKKYD
RVKTLDDDEEDDDEKDLIADEIFHGDAEGELEEGEAVDEPLHHADDDEEGEDEESDIDDF
IVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADTYDQGEEEEEDQDEEG
WDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDD
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQYEQISADP
DKPLADGIRPLDTADIERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKASKKRLKKI
KEVSEDGEEEELEVEEEEEPKAPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENL
RDSYQRHETEQFPAEPVELAKDYVCSQFSTPETVLEGTRYMVAMQIAREPLVRHVLRQTF
QERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGEQFLKMCLAEDEGLLSIDIC
IDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKELK
SKLITEAKESIIRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSR
DTPVFCALINGEGEVVDFLRLPYFMKRRNAFKEDEREKKAHDIENLKRFLSGKKPHVVAV
AGENRDAQMIMEDIKRTIGELEQESSLPAVGVELVDNELATLYMNSKKSEVDFRDYPPLL
RQAVSIARKIQDPLMEYAQVCSSDDDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEVG
VDVNKAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFIN
CAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALE
EILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVVYRVPNTEEVF
NLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELS
EVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKI
DIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQHRTPYIKRVI
AHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKEN
AFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNWGSKEKMEELLVKT
KREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEFVTITPDGFRYRSQVFPTVNGLFRW
FKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAV
TGQGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPS
QQALGTPQYPGSTPQSSHSHTTHGHPHGSHVSHHSHHGHHSSHQGHSSGTPSSSTSSRGR
TPQQQPPKASGSNASAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSIAG
DATPLLDEMDR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttattgagagcgaggctgaggagtcagaagaggagttcgaagagaaagac
ctaaagcctaaaaagacccagaggtttttggaggaagatgatgaagaggaagaagagaac
acagaggatcaggatgagcgaggaaatttacgtggacttattgatgatggagatgaggag
gagggggaggaggaagaaggacctgcaggaagtgcaagtggagcagggagtgactcagaa
gaggaagtaaggcatcgacgtaaaaagcgcaattatgacgactacctggatgaagatgat
ctggacctaattgaggaaaacttgggtgttaaagtgaaaaggaggaagaagaaatatgac
cgcgtaaaaacactcgatgatgatgaagaagatgatgacgagaaggacttgattgcagat
gaaatctttcatggtgatgcagagggcgagctggaggaaggcgaggctgtagatgagcct
cttcaccatgcagatgacgatgaagaaggagaggatgaggagtcggatatagacgatttc
attgtggatgatgacggccaacctataaccaaaaagaggggcaagaagttctcaggatac
acagatgcagccctccaggaggcccaagaaatttttggtggagactttgactttgctgac
tttgacgcagacacatacgaccagggtgaggaggaggaggaggaccaggatgaagagggt
tgggaccgacctaagaagcagaccaagaggaggcaagggaggaagagcatctttgaaatc
tacgagcccagcgagctggagagtagtcacatgactgaccaagacaatgaaattcgctct
acggacatgcccgagaggttccagttacgatctattcctgttaaacctgctgaggatgat
gagctggaagaggaagcagagtggatattcagacatggcttctccactcttactatttct
atgcaggaaagcacagattatctagacagggggaccaccacaaacttcagcaggaaaggc
cccagtacaattgccaagatcaaagaggccctcaacttcatgaggaatcaacaatttgag
gttccattcatagctttctacagaaaagaatatgtggagccagaactgaacattaatgac
ctgtggaaggtgtggcagtgggatgaaaagtggactcaactgaagactcggaagcagaac
ctgacccgtctgtttcggaagatgcagtcctaccagtatgagcagatctcagctgatcct
gacaaacctttggctgacggcatccgtcctctggataccgctgacatagagaggctaaaa
gatgtgcagactcttgaagagctgggtgatgtgtacaaccactttctgctttactacggc
cgagacatccccaagatgcagaatgctgccaaggccagtaagaagaggcttaagaagatc
aaagaagtgtcagaggatggtgaagaagaggaattggaggtagaagaagaagaagaaccg
aaagcacctgacctcaagctggcttctcgtagagatatgtatagcatttgtcagagcgta
ggacttgatggcttggctaaaaagtttgggttaactccagagcagtttggagaaaattta
cgagacagttaccagcgtcatgagacagagcagttcccggctgagcctgtagagctggcc
aaagattatgtttgcagccagttcagcactccggagacagtgctagaaggaaccaggtac
atggtggccatgcagattgctcgtgaacctctggtcagacatgttctccgacagaccttt
caggagagggccaagatcaatatcaagcctacaaagaagggcaaaaaggaggtagacgag
gctcattttgcctactccttcaagtaccttaagaacaaacctgtaaaagagctgaatggg
gaacagttcttgaagatgtgcctggcagaggacgaggggctgctttccattgacatctgt
atagaccttataggggtcaaagggtatgctggggaccagacatactttgatgagatcaaa
cagttctactacagggatgagttcagtcaccaggtgcaggagtggaataggcagcgaacc
ttagccatagagagagctctcactcagttcctctaccctcagatggcaaaggaactcaag
agcaaactcatcactgaggccaaagagagcattatcaggtcctgctgtcgtcggttgtat
aactggcttaaggtggctccttaccgaccagatcagcaggtcgaggaagacgatgatctg
atggatgagagtcagggcaaagggattcgggttctcggtgtagcctatgcgcccagcaga
gacacaccagttttctgtgctctgatcaacggggaaggggaggtggttgactttttgcgt
ctgccatatttcatgaagagaaggaatgcctttaaggaggatgagagagagaagaaggcc
cacgacattgaaaatctcaagaggtttctgtcaggaaagaaacctcatgtggtagctgtc
gctggggaaaaccgggatgctcaaatgatcatggaggacatcaagaggactatcggcgaa
cttgagcaagagtcctctctgcctgctgtgggagttgaacttgttgacaatgaattggcc
acactgtacatgaacagcaagaagtctgaggttgattttagggattaccctcccttgctg
cgacaggctgtgtcgatagccaggaagatccaggatccgctgatggaatatgctcaagtt
tgcagcagtgatgatgatattctctgcctcaaactacacccgctacaggaacatgtggtg
aaggaagatttgctctgtgctctctactgtgaatttatcaaccgtgtcaatgaggttgga
gttgatgtgaacaaggccattgcccatcctcacactcagagcctggtccagtatgtctgt
ggcctgggaccaagaaagggctcacatctgctcaagattctgaagcagaacaacactcgt
ctggaaaacagaacccaactggtcacaatgtgtcacatgggaccaaaggtttttatcaac
tgtgccggtttcatcaagattgacacggcatcgctcggggacagtacggactcctacatc
gaggttctggacggctctcgtgtccaccctgagacgtacgagtgggctcgcaagatggct
gtggatgcccttgagtatgatgagtcggcagaagatgccaacccagctggagctttggag
gagatcttggaaaatccagagcgtctcaaagatcttgacctggatgcctttgctgaagag
cttgagagacagggttatggcaacaaggggattactctgtatgatattcgtgcagagctg
agctgcaggtacaaagatttgagagttgtctacagagtccccaacactgaggaggtcttc
aaccttctcaccaaggagactccagagaccttttatattggtaagctgatcaccagtata
gtaactggtattgctcaccggcggcctcagggagagagctacgaccaggccatacgtaac
gattctacgggactgtggcagtgtcccttctgccagcaggacaactttcctgaactcagc
gaggtgtggaatcactttgacagcggttcgtgtccaggtcaggccattggtgtgcggtcc
agattagataatggcgtccagggattcattcccaccaagtttcttagtgacaaagtggtt
aaacaccctgaggagagggtcaaggtgggcatgacagttcactgccgcatcatgaaaatc
gacattgagaaatttagtgtcgacctcacatgccgaacctcagatttgatggacaaggcc
aatgagtggaagctccccaaggacagctactatgactttgatacagagtctgaagaccaa
aaacaagaggaggagctaaaaaagaaacaacatcgaacaccatatataaagcgtgtgatc
gcccaccccaacttccacaatatcagttttaaccaggcagagaaaatgatggagaccctg
gaccaaggagacttgatcatcagacccagcagcaagggagagaatcacctcacagtcacc
tggaaggtggctgatggcatctaccagcatgtggatgtgagagaagaaggcaaagaaaat
gcattcagcttggggcacacactctggatcaataatgaagagtttgaagatctggatgaa
atcactgctcggtacattcagccaatggcatcatttgcccgggatctactggggcataag
tactttcaggagtgcaactgggggagcaaggagaaaatggaggaattattggtcaagaca
aagagggagaagcctacttttattccttactttatttcggcatgtaaagatctgccagga
aaattcattctgggctaccagcctcgcggaaaaccacgggttgagtttgtgaccatcact
ccggatggtttccgctaccgttcacaggtatttcctacagtgaacggactattccgctgg
tttaaggaccattaccaagagcctgtgccaggcatcactcccagcaacagcagccgaaca
aggacacctgcatccctcaacgccaccccagccaatatcaacatcgcagacttgacacga
gctgtcaacgccctcccacgcaacatgacctctcagatgttcaatgccatcgccgcagtc
acaggccagggccagaaccccaacaccacccccgcccaatggggctccagccagtacggc
tacggtggcagcacaggaggaggaggagggagctcctctgcttatcatgtatttgcaaca
cctcagcagcccatggcgacgcccatgatgacacccagctactcctacaccacaccgagc
cagcaggccctgggcacgccccagtaccccggctccaccccgcagtcctctcactcacac
accacacatggccacccacatggaagccatgtgtcacaccacagccatcacggccatcac
agtagtcaccaaggccactcatccggcacgccgtcatcctccacctcatccagaggacgg
actccacagcagcagccgccaaaggccagcggcagcaacgcctctgcagtggactggggc
aagatggcggagcagtggctgaaggagaaagaagcagaggggcggaagaaagcccagagg
atgacgccacgaccgtcgcccagccccatgatcgagagcacacccatgtcaatcgcagga
gacgccacacccctgctggacgaaatggaccgatag
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integrated database retrieval system
