Etheostoma spectabile (orangethroat darter): 116701375
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Entry
116701375 CDS
T08457
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116701375 (vps50)
Membrane trafficking [BR:
esp04131
]
Protein recycling
Others
EARP complex
116701375 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
116701375
NCBI-ProteinID:
XP_032390935
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All DBs
Position
14:4330728..4444746
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AA seq
993 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPEAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETTSTAGE
VAAAESDEGVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSHFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
SQLHEFKFMGQCRSPSVSPSKQVASSTSPAQEELSLFQQYLQEGNPFEMQAERKEEETED
VLASNGYESDELEKSVYQDYDSDSDVADELKQDYVDEQTGDVPLKSASRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLPSHGGRDVCPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMEAVGE
NAGVHGTAEDRKEKVPSPHLSQMVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQ
HNVYVDVLLKEFEQFNMRLEEVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctcttatgacccggcagggcctgaaaagtccacaggaaagcatg
gcagacctcagtcctgtagagaacctgagaatcccgagcaaggaggagttgcgggagcta
agagagcagcccatcgaccccgaggctgagcaggagatcatcgacagcatcgaggaggtc
tacttctctaacgactccttcgacatggtgcagcacgaactggagaaactaccacctgag
ctgaacctgcaggagctggaagagtacagagacaagctgaaaagacaacaggcagcagtt
tctaaaaaggtcgccgatctcattctggagaaacagcccgcttatgtcaaggaactggag
cgagtgacggcattacagacaaacctgcagctggcagcggtcatttgcactaatgcaagg
aggcaactgagcgtggctaaggagggattcacagaagccagcttgggtctattagccaat
cagaggagacggcaattgctgacaggcctgcttaagtcactcaggactatcaagacgctg
caaagaactgatgtaagactcagcgagatgctagaggaggaagactatcccggtgcaatc
cagctctgtctggaatgtcaaaaggctgccagcacctttaaacactacagctgcatcagc
gaattgaattccaaactacaagacactctggagcaaatagaggagcagcttgatgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcccactacaccaaggtccagctggcttac
acgctcctggggaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacggtgttccaagtggtgctgggatacgtggagctatgtgccggaaacgct
gataccaaattccagaagatgcagtacaaagacctgtgcacgcatatcaccccggacagc
tacattccctgcctgacagatctatgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcacgaagagcatgacaaacaggagaccacttcaactgcaggtgaa
gtagcggcagcagagtctgatgagggtgtggtggaccgcagctatgtaaagaagaagcta
gagcatgggctgacacggatctggcaggacgtccagttgaaagtaaaggcctacattctg
gggacagacatgtctcactttaaatatgatgatttcattgtggtactggatgtcatcagc
aggttgatgcaggtgggtgaggagttctgcggcagtaagtcagaggtcctgcaggagtct
atcaaacgccagagtgtcaactactttaaaaactatcacagggcaagactggaagagctg
aggatgtttctggaaaacgagacatgggaactttgcccggttaagtctaacttcaacatc
tcccagctccatgagtttaaattcatgggccagtgtcgttctccgtccgtttccccaagc
aaacaggttgcgtcctcaaccagcccggctcaagaggagctgtctctgttccagcagtac
cttcaagaaggaaacccctttgagatgcaggctgagcgtaaagaggaggagacagaggat
gtgctggcgtctaatgggtacgagtcagacgagctggagaagagtgtgtatcaagattac
gacagcgacagcgatgtcgctgacgagctcaagcaggactacgtggacgagcagacgggt
gatgttccactcaagagtgcatctcgagagaccataagaagcaagaaaaagtctgactac
aacctcaataagaccaatgcaccgattctcaccaacaccaccctcaacgtcattcggctt
gttggcaagtatatgcagatgatgaacattctgaagccgatcgcctttgatgtcatccac
tgtgtgtcacagctctttgactactacctgtatgctgtatacaccttctttggtcgcaat
gacatgcctgtccctagcccgtctttgccatctcacggtggcagagatgtgtgccctgcc
agggtggtgggccctgcttgcttgtatgagtcatcgggcctgggtcttatcagcagcaga
ctgagaactacactgaaccggatccaggagagcctcattgacatggaggcagtgggagaa
aatgctggagtccacggcacagcagaggacagaaaggagaaggttcccagcccccatctc
agccaaatggtggtcctcactaacagtgggactctttatgggctagcacagagggtggtg
gccactgagtctctcgtgtttctggcggaacagtttgaatccctccagtcccacctggac
acaatgatgcctgcagccaagaagcctttcctgcaacagttttattcccagacggtgtcg
accgccagtgaacttcggaaaccaatatactggattgttgcggccaaggccatcgattac
gagcaaatgttgctcctgatggctggagttaaatgggacattagggagataatgtcacag
cataatgtatatgtggacgtcctgttaaaggagtttgagcaattcaacatgcggctggag
gaagtttccagacatgtgcgcatcccactgcctgtgtccaacgtcctgtgggagcactgc
atccgcctagccaacaggactctagtagaaggctatgctaatgtaaagaaatgcagcaac
gagggccgggccctgatgcagctggactttcaacagttccttatgaagctggagaagctg
accgacctgcgacccatccctgataaagaatttgttgagacctacatcaaggcctattac
ctgacagagaatgacatggagcagttcatcaagaaccacagggagtactccatgaagcag
ctagccaacttggtgaacgtttgtctgggttcacatataaataagaaggctcgtcagaaa
ctcctggcagccatagatgacattgacagacccaagagatag
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