Etheostoma spectabile (orangethroat darter): 116701385
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Entry
116701385 CDS
T08457
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116701385 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116701385 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116701385 (vps28)
Membrane trafficking [BR:
esp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
116701385 (vps28)
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116701385 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
116701385 (vps28)
Exosomal proteins of colorectal cancer cells
116701385 (vps28)
Exosomal proteins of bladder cancer cells
116701385 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
116701385
NCBI-ProteinID:
XP_032390950
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All DBs
Position
14:1901068..1906702
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AA seq
223 aa
AA seq
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MFHGIQVTGGVGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTASCSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgggatacaagttacaggaggagtgggaggagctcctgcaaacaagcctgag
ttatacgaggaggtgaaattatacaagaatgcaagagaacgagagaagtatgataatatg
gcagaattgttcgctgttgtcaagacccttcaggctctggagaaagcttacattaaagac
tgcgtcacacctaatgagtacactgcttcctgttccaggctgttggttcagtacaaggct
gcttttaaacaggtgcaaggctctgatgtgggctccattgatgatttctgcagaaagtac
agactcgactgccctctggcaatggaaagaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaaccgctgcattgcagatatagtttcccttttcatcactgtg
atggacaaactgagactggagatcagggccatggatgagatccagccagacctgagagaa
ctgatggaaacaatgaaccggatgagcaacatgcctccagactcagaagctaaggacaaa
gtcagcctctggttgaccaccctcagcagcatgtcagcctcagatgagttggatgataat
caggtgcgccagatgctatttgatctggagtcagcctacaatgcattcaaccgcttcctc
cattcctcctaa
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