Etheostoma spectabile (orangethroat darter): 116701390
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Entry
116701390 CDS
T08457
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116701390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116701390
03021 Transcription machinery [BR:
esp03021
]
116701390
03036 Chromosome and associated proteins [BR:
esp03036
]
116701390
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
ARID
116701390
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116701390
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116701390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
116701390
NCBI-ProteinID:
XP_032390954
LinkDB
All DBs
Position
14:20632951..20697393
Genome browser
AA seq
2322 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLPRVNNNSSNQNDSGGPEGNNHPGMGHHHPGPFSPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTYQGQGYGA
MNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGNQQPTSTPTLNQLLTSPSSA
RSYPNYPQGDYNNQEGASKGPGDMGSSQYGGVHPGWQQRTHHPPPMSPGNTGQPPNRNQP
PSPMDQVGKMRGQPYVGPNPYSQQQQGPPTGPVPQQGGSYPGQGYGPPGPQRYPMGMQQN
RTPGAMGGIQYGQQMSAYGQQGPGGYSQQSQGYYGQHGTPTHPGQQQQPPYTGQPQGSSG
PSYPQQGHASQPSGQHGQPGPPYQQSQGPHGPPPGQPPYSQPPQSQPGQPPYVPSQQQQQ
PQQQQGPGTQSQPGPQGQPGYQQAPGPGQPPQQQQTQQQQAAPQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQPGGPSPQTQQPPGHGQQGQPSPYSQTPPLQQPPPQQ
QQQQSPYQRFPPPPQELSQDSFSSQSSAPPSNQPMASNKSSQEDGMQARPSSLPDLSGSI
DDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASV
TPSRTGPLSPAAVPGNQMPPRPPSVQSDTILHSSMNQSAMGQDRVYMRNPQMPPYGSPGQ
PGSALSPRQSSGGQIHAGMGPYPQNNSMGNYGPQGAQYGPQGYPRQPGYTGMPNANYPTG
PGMGGSMNPMPGQASGAPYGSIPPGRIVPGQMGARPFGPGMAANMAGMPPQVASGMCPPP
GMNRKDGGPSMHHGPTNSVLNRPPGYPNMSQGMMGTGSPYGPGINSMHGMMNQGGPGPYP
MGANIANNTPGMAPNSEFGMEKINPTQKINNKVEGTPKPESKKKSSSSTITNEKITRLYE
LGPEPERKMWVDRFLAFAEEKAMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKW
RELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDFFNVDTKKNQPKIQPPS
PAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHTQMPPMPGVRSNVNVQDPFADGGD
PAFSRRNAMTPNSQGYQPGMGGPEMIARMGPYESNKDPFGGMRKAGEQFMQPGPNSGMGE
QYNRGPPGPMGNMQMGQRQQYPYGYDRRQEPGMGPDGSMGPGAPQPNMMPSGADTGMYSP
SRPPPQQRHESYTNQYPGQGAPPGGPYPNQQPGMYPQQQPNYKRPVDGGYGPPAKRHEGE
MYNVPYSGQQQPGPQPSGPQGQQDMYNQYNAYPGGDRRPPGPQNQFPFPFGRDRGPSSAG
PNSQSPMPPQMMASAMPSGPDGPQGPMWQGRNEMGYPNYPNRQGPPVPGQGPGYHSMNRS
EEMMPADQRMNHEGQWPGHVNQRQPPFGPGGSGPPMTRPLPSTYQTSQNHIPQVSSPTPM
PRPMESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPVQQPMIRRDVAFPPGSVEASQP
HLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLPG
FLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPNAAEDPVDEIPMPEGEDMDVDEED
EEDEEVEETKANPDTLSLVQVKQEEESSHKRTSLQDEEEEKERESSVKEPSNTSPSASSQ
DLTLHSEKPKQASKFDKLPIKVVRKKNPFLVNHSSTLGQRQSFDSGLTHWSIGGGDTTEH
IQTHFESRMDLLKQRKRKPSTTESRKKVQATEIVTETPDKSKSNGEDKPRQQQQQPQSSE
PRKSPAGKTTPPPPLPIGAPVTATIDDVLSARPGSVTEEVVRGGAEEQKENGKYLFSINP
DLQSRRNIKILEDEPHSKDETPLSTLSDWQDSLARRCICVSNIVRSLSFVPGNDLELSKH
PGLLLLLGRLVLLQHRHPERKQAPVTYEKEEEEDEGVSCERDEWWWDCLEVLRENCLVTL
ANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPTLGHHSSLSPQRLVLETLSK
LSIQDNNVDLILATPPFSRLEKLYGTLVRLVGERKVAVCREMAVVLLANLAQGDSLAARA
IAVQKASVGNLLGFLEDSLAATQYQQSQSSLLQMQGGPQFEPTSVDMMRRAARALHALAK
VEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggttgccagcgtcgccactctcaacacaagcccgccatccgaactcaaa
aagccggatcgggacccacaggaggagtcggtaccgggagagaaacagcatgaaaataag
gaaccgggacctgacggcggatctcctggccagaaggagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgacatgaagaacggcaacgggaatttgcccagg
gtaaataataatagcagtaatcagaatgattcaggcgggcccgaagggaataaccatccc
ggaatgggacaccaccacccgggccccttttctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggctaccccaac
cattataacaactacagccctttccagaacaggacttatcaaggccaaggatatggggcc
atgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcaacag
ccagcaggaggaaccacagctatggctgcctcttacaataatcagaggtataacatggga
aaccaacaacctacgtctacgccaactttaaatcagcttttgacgtcccctagctctgcc
aggagctatccgaattacccccaaggagactataacaatcaggaaggggccagcaagggg
ccaggagatatgggaagcagtcagtatggtggggtccatccgggttggcaacaaaggacc
catcatccgcctcccatgagcccgggaaacactggacaacctccaaaccgaaatcagcct
ccaagcccaatggaccaggtagggaagatgcgtggccagccatatgtaggacccaaccct
tactcccagcagcagcaggggcctcccacagggcctgtaccccagcagggaggctcttac
ccagggcagggctacggacctccgggccctcagaggtatcctatggggatgcagcagaac
cgaacacctggtgctatgggcggcatacagtatggacagcagatgtcagcctatggacaa
caaggacctggcggctacagccagcagagccagggctactatggtcagcacggcaccccc
actcaccctggccagcagcagcagcctccttacactggtcagccccagggcagctctgga
ccttcctacccccagcagggccatgcttcgcaaccttctggccagcacgggcagcctgga
cccccctaccaacaatcccagggcccccatggacctcctccagggcagcccccatatagc
cagcccccacagtcccagccaggacagccaccctacgtcccttcacagcagcagcagcag
cctcaacagcagcagggaccaggtacccaaagtcagccgggccctcagggccagcctggt
taccaacaagcccccggaccagggcagccaccacagcagcagcaaacccagcagcagcaa
gcggccccccaacaacaacagcaacaacaacagcaacaacaacaacaacaacagcaacaa
caacagcaacaacaacaacagcagcagcagcaacaacaacaacaacaacaacaacaacaa
cagcagcaacaaccaggaggtccgtctcctcaaacccagcaacctccaggtcatggccag
cagggtcaaccatcaccttactcacagacaccccccctgcagcagccaccaccacaacaa
cagcagcagcagtcaccatatcagaggttcccaccccctccacaggaactctcccaggat
tcctttagctcccagtccagcgctcctccatccaaccagcccatggcttccaacaagagc
agtcaagaagacggcatgcaggcccggccatccagtctgccggatctgtcgggctccatc
gacgacctgcccacgggtacagagggggccctgagcccgggggtcagcacctcaggggta
tccagcagtcagggtgagcagagcaatcccgcccagtcgcccttctctccgcacacttcg
ccccacctgccaggaatacgtggaccctcgccatcacctgtgggttcccctgccagcgtc
acgccctcccgcaccggtcctctgtcccctgctgctgtgccaggtaatcagatgcctccc
cggccgcccagcgtccagtcagataccatcctgcactcttccatgaaccagtcagccatg
ggccaggacagggtgtacatgcgtaaccctcagatgcctccttacgggtcccctggacaa
cctggctctgccttatctccacgccagtcttcaggaggccaaatacatgctgggatggga
ccatatccccagaacaactccatgggaaactacgggcctcagggggcccagtatggtcca
caaggttaccctaggcagcccggctacacggggatgcccaatgccaactaccccactggt
cctggcatgggcggctccatgaaccccatgcctgggcaggctagtggggctccgtatgga
agcatcccgcctggcagaatagtcccggggcaaatgggtgctcggccctttggccctggg
atggccgcaaacatggctggcatgcctcctcaggtggcttccggcatgtgcccccctcca
ggcatgaacaggaaggatggcgggccctccatgcaccatggacccaccaactccgtactc
aacaggccacctggttaccctaacatgtcccagggcatgatgggaacaggctctccatac
ggccctggcatcaacagcatgcacggtatgatgaaccagggagggccagggccttaccca
atgggagcaaatatagccaacaacactcctggaatggcgcccaattcggagtttggcatg
gaaaaaataaaccctacccagaagataaacaacaaagtggaggggacgcccaagcctgaa
tccaaaaagaagtcaagctcatccaccatcactaacgagaagatcactcgtctgtacgag
cttggcccagagccagagcggaagatgtgggtggatcgattcctggccttcgctgaggag
aaggccatgggcatgaacaaccttcctgctgtgggacgcaagcctcttgatctcttcaga
ctctacgtgtccgtcaaagagatcggcggcctcacccaggtgaacaagaacaagaagtgg
agggagctggccaccaacctaaacgtgggcacgtcgagcagcgccgccagttcacttaag
aaacagtacatccagtgtttgtacgccttcgagtgcaagatcgagcgcggcgaggacccg
cccccggacttcttcaacgtggacaccaaaaagaaccagccgaagatccagcctcccagc
ccagctggttctggatccctgcaaggaccccagactcctcaatccaccagtagttcaatg
gcagaggggggagacctgaagccccccaccccagcctccaccccgcacacgcaaatgcct
ccaatgcctggcgtcaggagtaacgttaatgtgcaggacccttttgctgatggcggagac
ccagcgttttccagaaggaatgccatgactcccaactcacagggctaccagcctggaatg
ggtggccccgagatgatcgctcgaatgggtccctacgagtccaacaaggatcccttcggt
ggcatgaggaaagctggagagcagtttatgcagccaggccccaacagtgggatgggagaa
cagtataacagaggcccaccaggccctatgggcaacatgcagatgggccagaggcaacag
tacccttatggatacgacagaagacaggagccaggcatgggccccgacggcagcatggga
cctggagcgcctcagcccaatatgatgccttctggagccgacacagggatgtactcgccc
agccgccctccaccacagcaacggcatgaatcctacaccaatcagtaccctggccaagga
gctccccctggtggcccgtacccaaatcaacagccaggaatgtatccacagcagcaaccg
aactacaagcgtcctgtagatggagggtatggccccccggccaagcgccatgaaggagaa
atgtacaacgtcccctacagtggtcagcagcagccaggaccccagccctcagggccccaa
ggccaacaggacatgtataaccagtataatgcataccctggaggggaccgcagaccacca
ggcccacagaaccagttccccttcccctttggccgggaccgagggccgtcatctgcaggc
cccaactcccagtctccaatgcctccccagatgatggcaagcgcgatgccttcgggtcct
gatggcccccagggcccaatgtggcagggccgcaatgagatgggctacccaaactatccc
aaccgacagggacctcctgtcccaggccagggccccggctaccatagcatgaaccgctcc
gaggagatgatgccagcagaccaacgcatgaaccatgaaggtcagtggcccggccacgtc
aaccagcggcagccaccgtttggccctggtggttctgggcctcccatgaccagacccctg
ccatccacctaccaaacttcccagaaccacattcctcaggtgtcgagcccgacgccaatg
ccccggcccatggaaagcaggacgtcgcccagcaagtccccctacatgcatccgggcatc
aaggtgcagaaagctggacccccagtgcccgcctcccatatcggccaggcccctgtgcag
caacccatgatcaggcgagatgtagccttccctcctggctctgtggaggcttcccaaccc
caccttaagccccgcagacggctcaccatgaaagacattggcacccctgaagcttggaga
gtgatgatgtcactaaagtcaggcttactagctgaaagcacctgggccttagacaccatt
aacattttactgtatgatgacaatagcatttctacttttaacttatgccagctgcctgga
ttcctggagctggtggtggagtacttcagacgctgcctcatcgagatcttcggcatctta
aaggagtacgaagtaggagaccctggccagcgcaccctcatagaccccaacgctgccgag
gatcccgtggatgaaatccccatgcctgagggcgaggacatggacgtggacgaagaagac
gaagaggacgaggaggtagaggaaacgaaggccaatcccgacactctctcactggtccag
gtgaaacaggaggaggagagctcgcacaaacgcacgtctttacaggacgaggaagaggag
aaggaacgggagtcttctgtcaaagaacccagtaatacatctccctcagcatcctcccaa
gacctcaccctccactcggaaaagcccaagcaggccagcaagtttgataaactccccatc
aaggtggtgcggaagaagaatccctttctggtgaaccactcgtccacgcttgggcagcgg
cagagcttcgatagcggcttgacgcactggagcattggtggcggagacactacggaacac
atccagacccactttgagagccggatggacctgctcaagcagcggaaacgcaagccatca
accactgagagccgcaaaaaggtccaggcgaccgagatcgtgacagaaacccccgacaaa
tccaagtccaacggggaggacaagcctcggcagcagcaacagcagccccagtcctctgaa
cctcggaagtctccagcagggaagacgacgccgccacctcctcttcccatcggtgcgccc
gtcaccgccaccattgacgatgtgctatctgcccgcccagggtcggtcacagaggaagtg
gtgcgcggcggtgcagaagaacagaaagagaacggaaagtacctgttcagcatcaaccct
gacctccagagccgacgcaacatcaagatcctggaggacgagccacacagcaaggacgag
acgccgctcagcactctgtcggactggcaggactcgctagctcgccgctgcatctgcgtt
tccaacatcgtgcgcagcctctccttcgttcctgggaacgacctggagttgtcaaaacac
ccaggcctgctactgctgttgggccgcctggtgctgctccaacacaggcaccccgaacgc
aaacaggccccggtcacctacgagaaggaggaggaggaagacgaaggcgtgagctgcgag
agggacgagtggtggtgggactgccttgaggtgttgcgagagaactgcctagtcaccctg
gcgaacatctcgggccagctggacctttctatctatccagagagcatatgtctgccactg
ctggatggcctgctccactgggctgtctgcccctcagcagaggccctggaccccttccct
acgctggggcaccacagttcactttccccccagagactggtcctcgagaccctcagcaag
ctcagcatccaggacaacaacgtcgacctcattctggcaacgccaccgttcagccgcttg
gagaagctgtacggcacgctggtgcgcttggtcggtgaacgcaaggtggccgtttgccga
gaaatggcggtcgtcctgttggccaacttggcacagggcgacagcctagcggcgcgggcc
attgctgtgcagaaagccagcgtgggtaacctgctgggcttcctggaggacagtctagct
gccacacagtaccagcagagccagagctctctgctccagatgcagggaggacctcagttt
gagcccaccagcgtggacatgatgcggcgggccgcccgggccctgcacgcccttgctaag
gtggaggaaaaccactctgagttcactttgtacgagtcgcggctactggacatctcagtg
tccccacttatgaactctctggtgtcccaggtgatctgtgacgtactgtttctgattggc
cagtcatga
DBGET
integrated database retrieval system
